Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21232:21227
Extra
PDB:
ATOM 1 O3' U A1231 -47.939 -43.495 -5.158 1.00111.37 O
ATOM 2 P U A1232 -48.756 -42.397 -6.008 1.00118.95 P
ATOM 3 OP1 U A1232 -47.803 -41.313 -6.351 1.00119.09 O
ATOM 4 OP2 U A1232 -49.978 -42.058 -5.229 1.00118.68 O
ATOM 5 O5' U A1232 -49.165 -43.194 -7.315 1.00119.68 O
ATOM 6 C5' U A1232 -49.134 -44.606 -7.328 1.00119.63 C
ATOM 7 C4' U A1232 -50.482 -45.204 -7.651 1.00119.93 C
ATOM 8 O4' U A1232 -50.980 -45.959 -6.508 1.00119.35 O
ATOM 9 C3' U A1232 -51.628 -44.247 -7.922 1.00120.26 C
ATOM 10 O3' U A1232 -51.520 -43.485 -9.140 1.00120.97 O
ATOM 11 C2' U A1232 -52.828 -45.191 -7.784 1.00120.31 C
ATOM 12 O2' U A1232 -52.876 -46.131 -8.846 1.00120.87 O
ATOM 13 C1' U A1232 -52.405 -45.953 -6.530 1.00119.54 C
ATOM 14 N1 U A1232 -52.908 -45.299 -5.312 1.00118.98 N
ATOM 15 C2 U A1232 -54.048 -45.863 -4.831 1.00118.89 C
ATOM 16 O2 U A1232 -54.510 -46.839 -5.378 1.00119.22 O
ATOM 17 N3 U A1232 -54.585 -45.279 -3.719 1.00118.41 N
ATOM 18 C4 U A1232 -54.077 -44.179 -3.079 1.00118.03 C
ATOM 19 O4 U A1232 -54.652 -43.751 -2.102 1.00117.64 O
ATOM 20 C5 U A1232 -52.887 -43.620 -3.638 1.00118.16 C
ATOM 21 C6 U A1232 -52.359 -44.184 -4.726 1.00118.63 C
ATOM 22 P U A1233 -52.216 -43.931 -10.526 1.00119.17 P
ATOM 23 OP1 U A1233 -51.848 -45.349 -10.765 1.00119.19 O
ATOM 24 OP2 U A1233 -51.842 -42.918 -11.550 1.00119.79 O
ATOM 25 O5' U A1233 -53.774 -43.822 -10.214 1.00119.23 O
TER
ATOM 1 O3' A B1226 -58.043 -51.621 9.050 1.00 91.32 O
ATOM 2 P G B1227 -58.921 -51.163 7.776 1.00107.02 P
ATOM 3 OP1 G B1227 -60.275 -50.796 8.283 1.00107.08 O
ATOM 4 OP2 G B1227 -58.805 -52.242 6.766 1.00107.45 O
ATOM 5 O5' G B1227 -58.177 -49.874 7.242 1.00107.03 O
ATOM 6 C5' G B1227 -58.699 -49.150 6.138 1.00107.54 C
ATOM 7 C4' G B1227 -58.085 -47.784 6.046 1.00107.42 C
ATOM 8 O4' G B1227 -57.484 -47.611 4.742 1.00107.85 O
ATOM 9 C3' G B1227 -59.046 -46.615 6.240 1.00107.50 C
ATOM 10 O3' G B1227 -58.402 -45.605 7.002 1.00107.04 O
ATOM 11 C2' G B1227 -59.271 -46.095 4.827 1.00108.14 C
ATOM 12 O2' G B1227 -59.562 -44.713 4.774 1.00108.22 O
ATOM 13 C1' G B1227 -57.928 -46.398 4.179 1.00108.16 C
ATOM 14 N9 G B1227 -57.956 -46.547 2.724 1.00108.81 N
ATOM 15 C8 G B1227 -58.594 -47.429 1.875 1.00109.32 C
ATOM 16 N7 G B1227 -58.285 -47.231 0.613 1.00109.84 N
ATOM 17 C5 G B1227 -57.384 -46.165 0.647 1.00109.66 C
ATOM 18 C6 G B1227 -56.677 -45.467 -0.375 1.00110.02 C
ATOM 19 O6 G B1227 -56.682 -45.638 -1.602 1.00110.62 O
ATOM 20 N1 G B1227 -55.884 -44.462 0.184 1.00109.63 N
ATOM 21 C2 G B1227 -55.743 -44.134 1.510 1.00108.98 C
ATOM 22 N2 G B1227 -54.920 -43.122 1.823 1.00108.71 N
ATOM 23 N3 G B1227 -56.389 -44.773 2.460 1.00108.64 N
ATOM 24 C4 G B1227 -57.173 -45.753 1.950 1.00109.01 C
ATOM 25 P C B1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 26 OP1 C B1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 27 OP2 C B1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 28 O5' C B1228 -57.902 -44.152 8.980 1.00 86.90 O
TER
ATOM 2 P U A1232 -48.756 -42.397 -6.008 1.00118.95 P
ATOM 3 OP1 U A1232 -47.803 -41.313 -6.351 1.00119.09 O
ATOM 4 OP2 U A1232 -49.978 -42.058 -5.229 1.00118.68 O
ATOM 5 O5' U A1232 -49.165 -43.194 -7.315 1.00119.68 O
ATOM 6 C5' U A1232 -49.134 -44.606 -7.328 1.00119.63 C
ATOM 7 C4' U A1232 -50.482 -45.204 -7.651 1.00119.93 C
ATOM 8 O4' U A1232 -50.980 -45.959 -6.508 1.00119.35 O
ATOM 9 C3' U A1232 -51.628 -44.247 -7.922 1.00120.26 C
ATOM 10 O3' U A1232 -51.520 -43.485 -9.140 1.00120.97 O
ATOM 11 C2' U A1232 -52.828 -45.191 -7.784 1.00120.31 C
ATOM 12 O2' U A1232 -52.876 -46.131 -8.846 1.00120.87 O
ATOM 13 C1' U A1232 -52.405 -45.953 -6.530 1.00119.54 C
ATOM 14 N1 U A1232 -52.908 -45.299 -5.312 1.00118.98 N
ATOM 15 C2 U A1232 -54.048 -45.863 -4.831 1.00118.89 C
ATOM 16 O2 U A1232 -54.510 -46.839 -5.378 1.00119.22 O
ATOM 17 N3 U A1232 -54.585 -45.279 -3.719 1.00118.41 N
ATOM 18 C4 U A1232 -54.077 -44.179 -3.079 1.00118.03 C
ATOM 19 O4 U A1232 -54.652 -43.751 -2.102 1.00117.64 O
ATOM 20 C5 U A1232 -52.887 -43.620 -3.638 1.00118.16 C
ATOM 21 C6 U A1232 -52.359 -44.184 -4.726 1.00118.63 C
ATOM 22 P U A1233 -52.216 -43.931 -10.526 1.00119.17 P
ATOM 23 OP1 U A1233 -51.848 -45.349 -10.765 1.00119.19 O
ATOM 24 OP2 U A1233 -51.842 -42.918 -11.550 1.00119.79 O
ATOM 25 O5' U A1233 -53.774 -43.822 -10.214 1.00119.23 O
TER
ATOM 1 O3' A B1226 -58.043 -51.621 9.050 1.00 91.32 O
ATOM 2 P G B1227 -58.921 -51.163 7.776 1.00107.02 P
ATOM 3 OP1 G B1227 -60.275 -50.796 8.283 1.00107.08 O
ATOM 4 OP2 G B1227 -58.805 -52.242 6.766 1.00107.45 O
ATOM 5 O5' G B1227 -58.177 -49.874 7.242 1.00107.03 O
ATOM 6 C5' G B1227 -58.699 -49.150 6.138 1.00107.54 C
ATOM 7 C4' G B1227 -58.085 -47.784 6.046 1.00107.42 C
ATOM 8 O4' G B1227 -57.484 -47.611 4.742 1.00107.85 O
ATOM 9 C3' G B1227 -59.046 -46.615 6.240 1.00107.50 C
ATOM 10 O3' G B1227 -58.402 -45.605 7.002 1.00107.04 O
ATOM 11 C2' G B1227 -59.271 -46.095 4.827 1.00108.14 C
ATOM 12 O2' G B1227 -59.562 -44.713 4.774 1.00108.22 O
ATOM 13 C1' G B1227 -57.928 -46.398 4.179 1.00108.16 C
ATOM 14 N9 G B1227 -57.956 -46.547 2.724 1.00108.81 N
ATOM 15 C8 G B1227 -58.594 -47.429 1.875 1.00109.32 C
ATOM 16 N7 G B1227 -58.285 -47.231 0.613 1.00109.84 N
ATOM 17 C5 G B1227 -57.384 -46.165 0.647 1.00109.66 C
ATOM 18 C6 G B1227 -56.677 -45.467 -0.375 1.00110.02 C
ATOM 19 O6 G B1227 -56.682 -45.638 -1.602 1.00110.62 O
ATOM 20 N1 G B1227 -55.884 -44.462 0.184 1.00109.63 N
ATOM 21 C2 G B1227 -55.743 -44.134 1.510 1.00108.98 C
ATOM 22 N2 G B1227 -54.920 -43.122 1.823 1.00108.71 N
ATOM 23 N3 G B1227 -56.389 -44.773 2.460 1.00108.64 N
ATOM 24 C4 G B1227 -57.173 -45.753 1.950 1.00109.01 C
ATOM 25 P C B1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 26 OP1 C B1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 27 OP2 C B1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 28 O5' C B1228 -57.902 -44.152 8.980 1.00 86.90 O
TER
Atoms:
C4: (-54.077,-44.179,-3.079)
N3: (-54.585,-45.279,-3.719)
OP1: (-47.803,-41.313,-6.351)
OP2: (-49.978,-42.058,-5.229)
C2: (-54.048,-45.863,-4.831)
C1': (-52.405,-45.953,-6.530)
C3': (-51.628,-44.247,-7.922)
O5': (-49.165,-43.194,-7.315)
O4': (-50.980,-45.959,-6.508)
C5': (-49.134,-44.606,-7.328)
P: (-48.756,-42.397,-6.008)
C4': (-50.482,-45.204,-7.651)
C2': (-52.828,-45.191,-7.784)
O2': (-52.876,-46.131,-8.846)
N1: (-52.908,-45.299,-5.312)
O4: (-54.652,-43.751,-2.102)
O2: (-54.510,-46.839,-5.378)
C6: (-52.359,-44.184,-4.726)
C5: (-52.887,-43.620,-3.638)
O3': (-51.520,-43.485,-9.140)
N3: (-54.585,-45.279,-3.719)
OP1: (-47.803,-41.313,-6.351)
OP2: (-49.978,-42.058,-5.229)
C2: (-54.048,-45.863,-4.831)
C1': (-52.405,-45.953,-6.530)
C3': (-51.628,-44.247,-7.922)
O5': (-49.165,-43.194,-7.315)
O4': (-50.980,-45.959,-6.508)
C5': (-49.134,-44.606,-7.328)
P: (-48.756,-42.397,-6.008)
C4': (-50.482,-45.204,-7.651)
C2': (-52.828,-45.191,-7.784)
O2': (-52.876,-46.131,-8.846)
N1: (-52.908,-45.299,-5.312)
O4: (-54.652,-43.751,-2.102)
O2: (-54.510,-46.839,-5.378)
C6: (-52.359,-44.184,-4.726)
C5: (-52.887,-43.620,-3.638)
O3': (-51.520,-43.485,-9.140)
OP1: (-60.275,-50.796,8.283)
OP2: (-58.805,-52.242,6.766)
C3': (-59.046,-46.615,6.240)
C1': (-57.928,-46.398,4.179)
C5': (-58.699,-49.150,6.138)
O6: (-56.682,-45.638,-1.602)
O4': (-57.484,-47.611,4.742)
C8: (-58.594,-47.429,1.875)
C2: (-55.743,-44.134,1.510)
C6: (-56.677,-45.467,-0.375)
C5: (-57.384,-46.165,0.647)
C4: (-57.173,-45.753,1.950)
P: (-58.921,-51.163,7.776)
C4': (-58.085,-47.784,6.046)
C2': (-59.271,-46.095,4.827)
O2': (-59.562,-44.713,4.774)
N1: (-55.884,-44.462,0.184)
N2: (-54.920,-43.122,1.823)
N3: (-56.389,-44.773,2.460)
N7: (-58.285,-47.231,0.613)
N9: (-57.956,-46.547,2.724)
O5': (-58.177,-49.874,7.242)
O3': (-58.402,-45.605,7.002)
OP2: (-58.805,-52.242,6.766)
C3': (-59.046,-46.615,6.240)
C1': (-57.928,-46.398,4.179)
C5': (-58.699,-49.150,6.138)
O6: (-56.682,-45.638,-1.602)
O4': (-57.484,-47.611,4.742)
C8: (-58.594,-47.429,1.875)
C2: (-55.743,-44.134,1.510)
C6: (-56.677,-45.467,-0.375)
C5: (-57.384,-46.165,0.647)
C4: (-57.173,-45.753,1.950)
P: (-58.921,-51.163,7.776)
C4': (-58.085,-47.784,6.046)
C2': (-59.271,-46.095,4.827)
O2': (-59.562,-44.713,4.774)
N1: (-55.884,-44.462,0.184)
N2: (-54.920,-43.122,1.823)
N3: (-56.389,-44.773,2.460)
N7: (-58.285,-47.231,0.613)
N9: (-57.956,-46.547,2.724)
O5': (-58.177,-49.874,7.242)
O3': (-58.402,-45.605,7.002)
Image (generated by PyMOL):