ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QEX:0351:0352

Extra

PDB:
ATOM 1 O3' G A 350 53.886 117.616 -6.485 1.00 89.32 O
ATOM 2 P A A 351 55.186 116.967 -7.167 1.00 89.44 P
ATOM 3 OP1 A A 351 54.738 116.399 -8.458 1.00 89.09 O
ATOM 4 OP2 A A 351 55.856 116.089 -6.173 1.00 89.28 O
ATOM 5 O5' A A 351 56.146 118.212 -7.444 1.00 88.77 O
ATOM 6 C5' A A 351 55.778 119.247 -8.378 1.00 87.58 C
ATOM 7 C4' A A 351 56.856 120.304 -8.438 1.00 87.47 C
ATOM 8 O4' A A 351 57.004 120.898 -7.123 1.00 87.17 O
ATOM 9 C3' A A 351 58.255 119.815 -8.779 1.00 87.87 C
ATOM 10 O3' A A 351 58.451 119.687 -10.183 1.00 89.15 O
ATOM 11 C2' A A 351 59.136 120.899 -8.176 1.00 87.75 C
ATOM 12 O2' A A 351 59.221 122.058 -8.975 1.00 87.60 O
ATOM 13 C1' A A 351 58.364 121.229 -6.899 1.00 87.59 C
ATOM 14 N9 A A 351 58.838 120.455 -5.756 1.00 87.85 N
ATOM 15 C8 A A 351 58.528 119.159 -5.425 1.00 87.73 C
ATOM 16 N7 A A 351 59.120 118.736 -4.335 1.00 88.22 N
ATOM 17 C5 A A 351 59.871 119.827 -3.919 1.00 88.55 C
ATOM 18 C6 A A 351 60.728 120.026 -2.818 1.00 89.25 C
ATOM 19 N6 A A 351 61.000 119.088 -1.904 1.00 89.02 N
ATOM 20 N1 A A 351 61.307 121.239 -2.691 1.00 89.90 N
ATOM 21 C2 A A 351 61.048 122.176 -3.617 1.00 89.53 C
ATOM 22 N3 A A 351 60.274 122.106 -4.694 1.00 88.68 N
ATOM 23 C4 A A 351 59.704 120.893 -4.787 1.00 88.30 C
ATOM 24 P C A 352 59.820 119.054 -10.744 1.00 90.39 P
ATOM 25 OP1 C A 352 59.798 119.211 -12.222 1.00 90.42 O
ATOM 26 OP2 C A 352 60.025 117.706 -10.149 1.00 90.10 O
ATOM 27 O5' C A 352 60.947 120.029 -10.190 1.00 88.13 O
TER

ATOM 1 O3' A B 351 58.451 119.687 -10.183 1.00 89.15 O
ATOM 2 P C B 352 59.820 119.054 -10.744 1.00 90.39 P
ATOM 3 OP1 C B 352 59.798 119.211 -12.222 1.00 90.42 O
ATOM 4 OP2 C B 352 60.025 117.706 -10.149 1.00 90.10 O
ATOM 5 O5' C B 352 60.947 120.029 -10.190 1.00 88.13 O
ATOM 6 C5' C B 352 61.195 121.283 -10.833 1.00 86.26 C
ATOM 7 C4' C B 352 62.521 121.835 -10.391 1.00 85.45 C
ATOM 8 O4' C B 352 62.456 122.193 -8.986 1.00 84.37 O
ATOM 9 C3' C B 352 63.678 120.857 -10.460 1.00 85.24 C
ATOM 10 O3' C B 352 64.188 120.716 -11.780 1.00 86.31 O
ATOM 11 C2' C B 352 64.667 121.484 -9.487 1.00 84.32 C
ATOM 12 O2' C B 352 65.369 122.585 -10.028 1.00 83.85 O
ATOM 13 C1' C B 352 63.721 121.967 -8.385 1.00 83.30 C
ATOM 14 N1 C B 352 63.561 120.951 -7.336 1.00 82.44 N
ATOM 15 C2 C B 352 64.502 120.904 -6.303 1.00 82.05 C
ATOM 16 O2 C B 352 65.418 121.746 -6.285 1.00 81.22 O
ATOM 17 N3 C B 352 64.391 119.948 -5.351 1.00 81.58 N
ATOM 18 C4 C B 352 63.388 119.070 -5.402 1.00 80.96 C
ATOM 19 N4 C B 352 63.327 118.144 -4.447 1.00 81.08 N
ATOM 20 C5 C B 352 62.405 119.105 -6.435 1.00 80.95 C
ATOM 21 C6 C B 352 62.527 120.054 -7.371 1.00 81.55 C
ATOM 22 P G B 353 64.592 119.258 -12.326 1.00 86.48 P
ATOM 23 OP1 G B 353 64.692 119.349 -13.803 1.00 87.14 O
ATOM 24 OP2 G B 353 63.681 118.258 -11.715 1.00 86.16 O
ATOM 25 O5' G B 353 66.056 119.033 -11.746 1.00 85.84 O
TER

Atoms:
OP1: (54.738,116.399,-8.458)
OP2: (55.856,116.089,-6.173)
C3': (58.255,119.815,-8.779)
C1': (58.364,121.229,-6.899)
C5': (55.778,119.247,-8.378)
O4': (57.004,120.898,-7.123)
C8: (58.528,119.159,-5.425)
O2': (59.221,122.058,-8.975)
C6: (60.728,120.026,-2.818)
C5: (59.871,119.827,-3.919)
C4: (59.704,120.893,-4.787)
P: (55.186,116.967,-7.167)
C4': (56.856,120.304,-8.438)
C2': (59.136,120.899,-8.176)
C2: (61.048,122.176,-3.617)
N1: (61.307,121.239,-2.691)
N3: (60.274,122.106,-4.694)
N6: (61.000,119.088,-1.904)
N7: (59.120,118.736,-4.335)
N9: (58.838,120.455,-5.756)
O5': (56.146,118.212,-7.444)
O3': (58.451,119.687,-10.183)
C2: (64.502,120.904,-6.303)
OP1: (59.798,119.211,-12.222)
OP2: (60.025,117.706,-10.149)
C4: (63.388,119.070,-5.402)
O5': (60.947,120.029,-10.190)
C3': (63.678,120.857,-10.460)
C1': (63.721,121.967,-8.385)
O4': (62.456,122.193,-8.986)
C5': (61.195,121.283,-10.833)
P: (59.820,119.054,-10.744)
O2: (65.418,121.746,-6.285)
C4': (62.521,121.835,-10.391)
C2': (64.667,121.484,-9.487)
O2': (65.369,122.585,-10.028)
N1: (63.561,120.951,-7.336)
N3: (64.391,119.948,-5.351)
N4: (63.327,118.144,-4.447)
C6: (62.527,120.054,-7.371)
C5: (62.405,119.105,-6.435)
O3': (64.188,120.716,-11.780)
Image (generated by PyMOL):
PyMOL image
show in jmol