Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0581:0582
Extra
PDB:
ATOM 1 O3' G A 580 -2.073 102.662 101.658 1.00 46.95 O
ATOM 2 P A A 581 -2.781 103.997 101.118 1.00 50.37 P
ATOM 3 OP1 A A 581 -2.830 104.971 102.244 1.00 48.33 O
ATOM 4 OP2 A A 581 -4.029 103.632 100.410 1.00 50.24 O
ATOM 5 O5' A A 581 -1.755 104.548 100.034 1.00 51.01 O
ATOM 6 C5' A A 581 -0.403 104.917 100.396 1.00 50.11 C
ATOM 7 C4' A A 581 0.546 104.593 99.261 1.00 49.83 C
ATOM 8 O4' A A 581 0.723 103.155 99.156 1.00 50.11 O
ATOM 9 C3' A A 581 0.060 105.026 97.887 1.00 48.36 C
ATOM 10 O3' A A 581 0.374 106.388 97.638 1.00 44.11 O
ATOM 11 C2' A A 581 0.797 104.064 96.969 1.00 50.55 C
ATOM 12 O2' A A 581 2.140 104.450 96.781 1.00 51.76 O
ATOM 13 C1' A A 581 0.746 102.772 97.790 1.00 53.16 C
ATOM 14 N9 A A 581 -0.463 101.987 97.529 1.00 58.49 N
ATOM 15 C8 A A 581 -1.586 101.904 98.320 1.00 61.23 C
ATOM 16 N7 A A 581 -2.538 101.160 97.814 1.00 62.62 N
ATOM 17 C5 A A 581 -2.008 100.713 96.613 1.00 62.80 C
ATOM 18 C6 A A 581 -2.531 99.896 95.598 1.00 64.09 C
ATOM 19 N6 A A 581 -3.754 99.358 95.636 1.00 64.23 N
ATOM 20 N1 A A 581 -1.748 99.648 94.526 1.00 64.36 N
ATOM 21 C2 A A 581 -0.522 100.186 94.492 1.00 64.03 C
ATOM 22 N3 A A 581 0.083 100.968 95.384 1.00 63.11 N
ATOM 23 C4 A A 581 -0.724 101.202 96.431 1.00 61.34 C
ATOM 24 P C A 582 -0.671 107.315 96.845 1.00 42.42 P
ATOM 25 OP1 C A 582 -0.016 108.627 96.620 1.00 40.45 O
ATOM 26 OP2 C A 582 -1.972 107.269 97.541 1.00 43.59 O
ATOM 27 O5' C A 582 -0.835 106.580 95.444 1.00 40.34 O
TER
ATOM 1 O3' A B 581 0.374 106.388 97.638 1.00 44.11 O
ATOM 2 P C B 582 -0.671 107.315 96.845 1.00 42.42 P
ATOM 3 OP1 C B 582 -0.016 108.627 96.620 1.00 40.45 O
ATOM 4 OP2 C B 582 -1.972 107.269 97.541 1.00 43.59 O
ATOM 5 O5' C B 582 -0.835 106.580 95.444 1.00 40.34 O
ATOM 6 C5' C B 582 0.281 106.436 94.565 1.00 38.04 C
ATOM 7 C4' C B 582 -0.083 105.579 93.379 1.00 39.14 C
ATOM 8 O4' C B 582 -0.440 104.247 93.827 1.00 39.33 O
ATOM 9 C3' C B 582 -1.277 106.012 92.544 1.00 37.85 C
ATOM 10 O3' C B 582 -0.938 107.030 91.618 1.00 37.22 O
ATOM 11 C2' C B 582 -1.617 104.720 91.823 1.00 40.24 C
ATOM 12 O2' C B 582 -0.713 104.469 90.766 1.00 37.38 O
ATOM 13 C1' C B 582 -1.402 103.693 92.940 1.00 41.60 C
ATOM 14 N1 C B 582 -2.644 103.416 93.700 1.00 45.92 N
ATOM 15 C2 C B 582 -3.531 102.416 93.236 1.00 46.67 C
ATOM 16 O2 C B 582 -3.238 101.762 92.221 1.00 46.18 O
ATOM 17 N3 C B 582 -4.682 102.194 93.912 1.00 47.73 N
ATOM 18 C4 C B 582 -4.965 102.913 95.002 1.00 48.30 C
ATOM 19 N4 C B 582 -6.124 102.684 95.617 1.00 49.34 N
ATOM 20 C5 C B 582 -4.075 103.910 95.506 1.00 46.33 C
ATOM 21 C6 C B 582 -2.942 104.127 94.833 1.00 45.53 C
ATOM 22 P U B 583 -2.039 108.117 91.189 1.00 39.50 P
ATOM 23 OP1 U B 583 -1.413 108.982 90.161 1.00 40.82 O
ATOM 24 OP2 U B 583 -2.617 108.734 92.405 1.00 36.76 O
ATOM 25 O5' U B 583 -3.183 107.258 90.494 1.00 37.95 O
TER
ATOM 2 P A A 581 -2.781 103.997 101.118 1.00 50.37 P
ATOM 3 OP1 A A 581 -2.830 104.971 102.244 1.00 48.33 O
ATOM 4 OP2 A A 581 -4.029 103.632 100.410 1.00 50.24 O
ATOM 5 O5' A A 581 -1.755 104.548 100.034 1.00 51.01 O
ATOM 6 C5' A A 581 -0.403 104.917 100.396 1.00 50.11 C
ATOM 7 C4' A A 581 0.546 104.593 99.261 1.00 49.83 C
ATOM 8 O4' A A 581 0.723 103.155 99.156 1.00 50.11 O
ATOM 9 C3' A A 581 0.060 105.026 97.887 1.00 48.36 C
ATOM 10 O3' A A 581 0.374 106.388 97.638 1.00 44.11 O
ATOM 11 C2' A A 581 0.797 104.064 96.969 1.00 50.55 C
ATOM 12 O2' A A 581 2.140 104.450 96.781 1.00 51.76 O
ATOM 13 C1' A A 581 0.746 102.772 97.790 1.00 53.16 C
ATOM 14 N9 A A 581 -0.463 101.987 97.529 1.00 58.49 N
ATOM 15 C8 A A 581 -1.586 101.904 98.320 1.00 61.23 C
ATOM 16 N7 A A 581 -2.538 101.160 97.814 1.00 62.62 N
ATOM 17 C5 A A 581 -2.008 100.713 96.613 1.00 62.80 C
ATOM 18 C6 A A 581 -2.531 99.896 95.598 1.00 64.09 C
ATOM 19 N6 A A 581 -3.754 99.358 95.636 1.00 64.23 N
ATOM 20 N1 A A 581 -1.748 99.648 94.526 1.00 64.36 N
ATOM 21 C2 A A 581 -0.522 100.186 94.492 1.00 64.03 C
ATOM 22 N3 A A 581 0.083 100.968 95.384 1.00 63.11 N
ATOM 23 C4 A A 581 -0.724 101.202 96.431 1.00 61.34 C
ATOM 24 P C A 582 -0.671 107.315 96.845 1.00 42.42 P
ATOM 25 OP1 C A 582 -0.016 108.627 96.620 1.00 40.45 O
ATOM 26 OP2 C A 582 -1.972 107.269 97.541 1.00 43.59 O
ATOM 27 O5' C A 582 -0.835 106.580 95.444 1.00 40.34 O
TER
ATOM 1 O3' A B 581 0.374 106.388 97.638 1.00 44.11 O
ATOM 2 P C B 582 -0.671 107.315 96.845 1.00 42.42 P
ATOM 3 OP1 C B 582 -0.016 108.627 96.620 1.00 40.45 O
ATOM 4 OP2 C B 582 -1.972 107.269 97.541 1.00 43.59 O
ATOM 5 O5' C B 582 -0.835 106.580 95.444 1.00 40.34 O
ATOM 6 C5' C B 582 0.281 106.436 94.565 1.00 38.04 C
ATOM 7 C4' C B 582 -0.083 105.579 93.379 1.00 39.14 C
ATOM 8 O4' C B 582 -0.440 104.247 93.827 1.00 39.33 O
ATOM 9 C3' C B 582 -1.277 106.012 92.544 1.00 37.85 C
ATOM 10 O3' C B 582 -0.938 107.030 91.618 1.00 37.22 O
ATOM 11 C2' C B 582 -1.617 104.720 91.823 1.00 40.24 C
ATOM 12 O2' C B 582 -0.713 104.469 90.766 1.00 37.38 O
ATOM 13 C1' C B 582 -1.402 103.693 92.940 1.00 41.60 C
ATOM 14 N1 C B 582 -2.644 103.416 93.700 1.00 45.92 N
ATOM 15 C2 C B 582 -3.531 102.416 93.236 1.00 46.67 C
ATOM 16 O2 C B 582 -3.238 101.762 92.221 1.00 46.18 O
ATOM 17 N3 C B 582 -4.682 102.194 93.912 1.00 47.73 N
ATOM 18 C4 C B 582 -4.965 102.913 95.002 1.00 48.30 C
ATOM 19 N4 C B 582 -6.124 102.684 95.617 1.00 49.34 N
ATOM 20 C5 C B 582 -4.075 103.910 95.506 1.00 46.33 C
ATOM 21 C6 C B 582 -2.942 104.127 94.833 1.00 45.53 C
ATOM 22 P U B 583 -2.039 108.117 91.189 1.00 39.50 P
ATOM 23 OP1 U B 583 -1.413 108.982 90.161 1.00 40.82 O
ATOM 24 OP2 U B 583 -2.617 108.734 92.405 1.00 36.76 O
ATOM 25 O5' U B 583 -3.183 107.258 90.494 1.00 37.95 O
TER
Atoms:
OP1: (-2.830,104.971,102.244)
OP2: (-4.029,103.632,100.410)
C3': (0.060,105.026,97.887)
C1': (0.746,102.772,97.790)
C5': (-0.403,104.917,100.396)
O4': (0.723,103.155,99.156)
C8: (-1.586,101.904,98.320)
O2': (2.140,104.450,96.781)
C6: (-2.531,99.896,95.598)
C5: (-2.008,100.713,96.613)
C4: (-0.724,101.202,96.431)
P: (-2.781,103.997,101.118)
C4': (0.546,104.593,99.261)
C2': (0.797,104.064,96.969)
C2: (-0.522,100.186,94.492)
N1: (-1.748,99.648,94.526)
N3: (0.083,100.968,95.384)
N6: (-3.754,99.358,95.636)
N7: (-2.538,101.160,97.814)
N9: (-0.463,101.987,97.529)
O5': (-1.755,104.548,100.034)
O3': (0.374,106.388,97.638)
OP2: (-4.029,103.632,100.410)
C3': (0.060,105.026,97.887)
C1': (0.746,102.772,97.790)
C5': (-0.403,104.917,100.396)
O4': (0.723,103.155,99.156)
C8: (-1.586,101.904,98.320)
O2': (2.140,104.450,96.781)
C6: (-2.531,99.896,95.598)
C5: (-2.008,100.713,96.613)
C4: (-0.724,101.202,96.431)
P: (-2.781,103.997,101.118)
C4': (0.546,104.593,99.261)
C2': (0.797,104.064,96.969)
C2: (-0.522,100.186,94.492)
N1: (-1.748,99.648,94.526)
N3: (0.083,100.968,95.384)
N6: (-3.754,99.358,95.636)
N7: (-2.538,101.160,97.814)
N9: (-0.463,101.987,97.529)
O5': (-1.755,104.548,100.034)
O3': (0.374,106.388,97.638)
C2: (-3.531,102.416,93.236)
OP1: (-0.016,108.627,96.620)
OP2: (-1.972,107.269,97.541)
C4: (-4.965,102.913,95.002)
O5': (-0.835,106.580,95.444)
C3': (-1.277,106.012,92.544)
C1': (-1.402,103.693,92.940)
O4': (-0.440,104.247,93.827)
C5': (0.281,106.436,94.565)
P: (-0.671,107.315,96.845)
O2: (-3.238,101.762,92.221)
C4': (-0.083,105.579,93.379)
C2': (-1.617,104.720,91.823)
O2': (-0.713,104.469,90.766)
N1: (-2.644,103.416,93.700)
N3: (-4.682,102.194,93.912)
N4: (-6.124,102.684,95.617)
C6: (-2.942,104.127,94.833)
C5: (-4.075,103.910,95.506)
O3': (-0.938,107.030,91.618)
OP1: (-0.016,108.627,96.620)
OP2: (-1.972,107.269,97.541)
C4: (-4.965,102.913,95.002)
O5': (-0.835,106.580,95.444)
C3': (-1.277,106.012,92.544)
C1': (-1.402,103.693,92.940)
O4': (-0.440,104.247,93.827)
C5': (0.281,106.436,94.565)
P: (-0.671,107.315,96.845)
O2: (-3.238,101.762,92.221)
C4': (-0.083,105.579,93.379)
C2': (-1.617,104.720,91.823)
O2': (-0.713,104.469,90.766)
N1: (-2.644,103.416,93.700)
N3: (-4.682,102.194,93.912)
N4: (-6.124,102.684,95.617)
C6: (-2.942,104.127,94.833)
C5: (-4.075,103.910,95.506)
O3': (-0.938,107.030,91.618)
Image (generated by PyMOL):