ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:933:934

Extra

PDB:
ATOM 1 O3' U A 32 86.590 8.233 88.743 1.00 70.50 O
ATOM 2 P A A 33 87.808 7.511 87.988 1.00 71.30 P
ATOM 3 OP1 A A 33 88.401 6.522 88.928 1.00 70.70 O
ATOM 4 OP2 A A 33 88.667 8.556 87.377 1.00 71.63 O
ATOM 5 O5' A A 33 87.090 6.710 86.818 1.00 70.05 O
ATOM 6 C5' A A 33 87.844 5.981 85.842 1.00 68.89 C
ATOM 7 C4' A A 33 87.039 5.858 84.579 1.00 68.21 C
ATOM 8 O4' A A 33 85.787 5.190 84.892 1.00 67.64 O
ATOM 9 C3' A A 33 86.614 7.191 83.989 1.00 68.57 C
ATOM 10 O3' A A 33 87.644 7.762 83.182 1.00 71.59 O
ATOM 11 C2' A A 33 85.344 6.825 83.230 1.00 66.95 C
ATOM 12 O2' A A 33 85.599 6.208 81.984 1.00 64.90 O
ATOM 13 C1' A A 33 84.719 5.807 84.187 1.00 65.82 C
ATOM 14 N9 A A 33 83.806 6.397 85.172 1.00 63.38 N
ATOM 15 C8 A A 33 84.096 6.798 86.458 1.00 62.78 C
ATOM 16 N7 A A 33 83.065 7.280 87.108 1.00 61.94 N
ATOM 17 C5 A A 33 82.024 7.196 86.191 1.00 61.43 C
ATOM 18 C6 A A 33 80.661 7.549 86.268 1.00 60.55 C
ATOM 19 N6 A A 33 80.087 8.077 87.352 1.00 60.51 N
ATOM 20 N1 A A 33 79.899 7.339 85.175 1.00 60.06 N
ATOM 21 C2 A A 33 80.472 6.808 84.087 1.00 60.34 C
ATOM 22 N3 A A 33 81.735 6.435 83.893 1.00 60.38 N
ATOM 23 C4 A A 33 82.468 6.658 84.994 1.00 61.09 C
ATOM 24 P C A 34 87.461 9.245 82.582 1.00 72.50 P
ATOM 25 OP1 C A 34 88.690 9.603 81.818 1.00 72.47 O
ATOM 26 OP2 C A 34 86.980 10.152 83.667 1.00 71.31 O
ATOM 27 O5' C A 34 86.296 9.035 81.523 1.00 68.99 O
TER

ATOM 1 O3' A B 33 87.644 7.762 83.182 1.00 71.59 O
ATOM 2 P C B 34 87.461 9.245 82.582 1.00 72.50 P
ATOM 3 OP1 C B 34 88.690 9.603 81.818 1.00 72.47 O
ATOM 4 OP2 C B 34 86.980 10.152 83.667 1.00 71.31 O
ATOM 5 O5' C B 34 86.296 9.035 81.523 1.00 68.99 O
ATOM 6 C5' C B 34 85.517 10.133 81.085 1.00 66.23 C
ATOM 7 C4' C B 34 84.148 9.669 80.676 1.00 62.78 C
ATOM 8 O4' C B 34 83.533 8.898 81.739 1.00 61.29 O
ATOM 9 C3' C B 34 83.215 10.835 80.458 1.00 62.01 C
ATOM 10 O3' C B 34 83.426 11.357 79.154 1.00 61.89 O
ATOM 11 C2' C B 34 81.845 10.220 80.718 1.00 60.31 C
ATOM 12 O2' C B 34 81.359 9.473 79.623 1.00 61.23 O
ATOM 13 C1' C B 34 82.166 9.261 81.870 1.00 58.16 C
ATOM 14 N1 C B 34 81.966 9.815 83.230 1.00 54.88 N
ATOM 15 C2 C B 34 80.671 10.144 83.659 1.00 52.39 C
ATOM 16 O2 C B 34 79.720 10.002 82.880 1.00 52.27 O
ATOM 17 N3 C B 34 80.494 10.615 84.913 1.00 51.40 N
ATOM 18 C4 C B 34 81.542 10.771 85.725 1.00 51.28 C
ATOM 19 N4 C B 34 81.318 11.222 86.961 1.00 51.73 N
ATOM 20 C5 C B 34 82.866 10.466 85.310 1.00 52.25 C
ATOM 21 C6 C B 34 83.031 9.994 84.070 1.00 54.40 C
ATOM 22 P C B 35 84.113 12.799 78.982 1.00 62.62 P
ATOM 23 OP1 C B 35 84.626 12.864 77.590 1.00 61.24 O
ATOM 24 OP2 C B 35 85.039 13.063 80.120 1.00 58.78 O
ATOM 25 O5' C B 35 82.880 13.798 79.118 1.00 62.64 O
TER

Atoms:
OP1: (88.401,6.522,88.928)
OP2: (88.667,8.556,87.377)
C3': (86.614,7.191,83.989)
C1': (84.719,5.807,84.187)
C5': (87.844,5.981,85.842)
O4': (85.787,5.190,84.892)
C8: (84.096,6.798,86.458)
O2': (85.599,6.208,81.984)
C6: (80.661,7.549,86.268)
C5: (82.024,7.196,86.191)
C4: (82.468,6.658,84.994)
P: (87.808,7.511,87.988)
C4': (87.039,5.858,84.579)
C2': (85.344,6.825,83.230)
C2: (80.472,6.808,84.087)
N1: (79.899,7.339,85.175)
N3: (81.735,6.435,83.893)
N6: (80.087,8.077,87.352)
N7: (83.065,7.280,87.108)
N9: (83.806,6.397,85.172)
O5': (87.090,6.710,86.818)
O3': (87.644,7.762,83.182)
C2: (80.671,10.144,83.659)
OP1: (88.690,9.603,81.818)
OP2: (86.980,10.152,83.667)
C4: (81.542,10.771,85.725)
O5': (86.296,9.035,81.523)
C3': (83.215,10.835,80.458)
C1': (82.166,9.261,81.870)
O4': (83.533,8.898,81.739)
C5': (85.517,10.133,81.085)
P: (87.461,9.245,82.582)
O2: (79.720,10.002,82.880)
C4': (84.148,9.669,80.676)
C2': (81.845,10.220,80.718)
O2': (81.359,9.473,79.623)
N1: (81.966,9.815,83.230)
N3: (80.494,10.615,84.913)
N4: (81.318,11.222,86.961)
C6: (83.031,9.994,84.070)
C5: (82.866,10.466,85.310)
O3': (83.426,11.357,79.154)
Image (generated by PyMOL):
PyMOL image
show in jmol