Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01300:01272
Extra
PDB:
ATOM 1 O3' G A1299 17.877 141.463 54.900 1.00 40.95 O
ATOM 2 P A A1300 18.713 141.794 53.567 1.00 42.83 P
ATOM 3 OP1 A A1300 19.968 142.500 53.948 1.00 44.14 O
ATOM 4 OP2 A A1300 17.805 142.406 52.569 1.00 42.33 O
ATOM 5 O5' A A1300 19.104 140.349 53.040 1.00 41.20 O
ATOM 6 C5' A A1300 20.038 139.548 53.771 1.00 40.23 C
ATOM 7 C4' A A1300 19.735 138.090 53.575 1.00 40.64 C
ATOM 8 O4' A A1300 18.554 137.709 54.337 1.00 41.80 O
ATOM 9 C3' A A1300 19.467 137.675 52.139 1.00 39.77 C
ATOM 10 O3' A A1300 19.957 136.365 51.982 1.00 40.11 O
ATOM 11 C2' A A1300 17.943 137.656 52.079 1.00 39.45 C
ATOM 12 O2' A A1300 17.463 136.768 51.090 1.00 40.04 O
ATOM 13 C1' A A1300 17.604 137.126 53.471 1.00 39.16 C
ATOM 14 N9 A A1300 16.267 137.458 53.963 1.00 37.35 N
ATOM 15 C8 A A1300 15.833 138.634 54.528 1.00 38.12 C
ATOM 16 N7 A A1300 14.580 138.604 54.916 1.00 36.28 N
ATOM 17 C5 A A1300 14.158 137.328 54.575 1.00 34.93 C
ATOM 18 C6 A A1300 12.932 136.667 54.736 1.00 33.37 C
ATOM 19 N6 A A1300 11.862 137.220 55.311 1.00 32.76 N
ATOM 20 N1 A A1300 12.840 135.401 54.285 1.00 32.81 N
ATOM 21 C2 A A1300 13.913 134.842 53.716 1.00 34.59 C
ATOM 22 N3 A A1300 15.122 135.355 53.514 1.00 36.06 N
ATOM 23 C4 A A1300 15.180 136.617 53.973 1.00 35.86 C
ATOM 24 P C A1301 20.939 136.033 50.776 1.00 40.30 P
ATOM 25 OP1 C A1301 22.287 136.442 51.196 1.00 44.00 O
ATOM 26 OP2 C A1301 20.366 136.591 49.536 1.00 45.58 O
ATOM 27 O5' C A1301 20.846 134.451 50.656 1.00 39.86 O
TER
ATOM 1 O3' G B1271 6.101 128.177 54.137 1.00 39.71 O
ATOM 2 P A B1272 5.753 129.611 53.512 1.00 40.53 P
ATOM 3 OP1 A B1272 4.729 130.252 54.389 1.00 39.80 O
ATOM 4 OP2 A B1272 5.477 129.431 52.071 1.00 39.76 O
ATOM 5 O5' A B1272 7.109 130.430 53.658 1.00 40.59 O
ATOM 6 C5' A B1272 7.538 130.911 54.940 1.00 41.08 C
ATOM 7 C4' A B1272 8.608 131.956 54.774 1.00 40.80 C
ATOM 8 O4' A B1272 9.833 131.351 54.288 1.00 41.46 O
ATOM 9 C3' A B1272 8.307 133.033 53.753 1.00 41.20 C
ATOM 10 O3' A B1272 7.457 134.029 54.298 1.00 43.14 O
ATOM 11 C2' A B1272 9.697 133.565 53.440 1.00 39.98 C
ATOM 12 O2' A B1272 10.162 134.419 54.464 1.00 41.27 O
ATOM 13 C1' A B1272 10.518 132.275 53.458 1.00 39.83 C
ATOM 14 N9 A B1272 10.691 131.662 52.141 1.00 41.58 N
ATOM 15 C8 A B1272 9.987 130.612 51.597 1.00 40.65 C
ATOM 16 N7 A B1272 10.403 130.260 50.405 1.00 42.40 N
ATOM 17 C5 A B1272 11.449 131.137 50.142 1.00 41.11 C
ATOM 18 C6 A B1272 12.314 131.276 49.044 1.00 41.23 C
ATOM 19 N6 A B1272 12.282 130.488 47.968 1.00 39.74 N
ATOM 20 N1 A B1272 13.234 132.265 49.092 1.00 41.83 N
ATOM 21 C2 A B1272 13.281 133.044 50.178 1.00 41.00 C
ATOM 22 N3 A B1272 12.534 133.003 51.276 1.00 40.66 N
ATOM 23 C4 A B1272 11.626 132.016 51.196 1.00 40.91 C
ATOM 24 P U B1273 6.450 134.830 53.338 1.00 43.92 P
ATOM 25 OP1 U B1273 5.070 134.538 53.784 1.00 43.02 O
ATOM 26 OP2 U B1273 6.833 134.593 51.913 1.00 44.45 O
ATOM 27 O5' U B1273 6.757 136.350 53.675 1.00 43.21 O
TER
ATOM 2 P A A1300 18.713 141.794 53.567 1.00 42.83 P
ATOM 3 OP1 A A1300 19.968 142.500 53.948 1.00 44.14 O
ATOM 4 OP2 A A1300 17.805 142.406 52.569 1.00 42.33 O
ATOM 5 O5' A A1300 19.104 140.349 53.040 1.00 41.20 O
ATOM 6 C5' A A1300 20.038 139.548 53.771 1.00 40.23 C
ATOM 7 C4' A A1300 19.735 138.090 53.575 1.00 40.64 C
ATOM 8 O4' A A1300 18.554 137.709 54.337 1.00 41.80 O
ATOM 9 C3' A A1300 19.467 137.675 52.139 1.00 39.77 C
ATOM 10 O3' A A1300 19.957 136.365 51.982 1.00 40.11 O
ATOM 11 C2' A A1300 17.943 137.656 52.079 1.00 39.45 C
ATOM 12 O2' A A1300 17.463 136.768 51.090 1.00 40.04 O
ATOM 13 C1' A A1300 17.604 137.126 53.471 1.00 39.16 C
ATOM 14 N9 A A1300 16.267 137.458 53.963 1.00 37.35 N
ATOM 15 C8 A A1300 15.833 138.634 54.528 1.00 38.12 C
ATOM 16 N7 A A1300 14.580 138.604 54.916 1.00 36.28 N
ATOM 17 C5 A A1300 14.158 137.328 54.575 1.00 34.93 C
ATOM 18 C6 A A1300 12.932 136.667 54.736 1.00 33.37 C
ATOM 19 N6 A A1300 11.862 137.220 55.311 1.00 32.76 N
ATOM 20 N1 A A1300 12.840 135.401 54.285 1.00 32.81 N
ATOM 21 C2 A A1300 13.913 134.842 53.716 1.00 34.59 C
ATOM 22 N3 A A1300 15.122 135.355 53.514 1.00 36.06 N
ATOM 23 C4 A A1300 15.180 136.617 53.973 1.00 35.86 C
ATOM 24 P C A1301 20.939 136.033 50.776 1.00 40.30 P
ATOM 25 OP1 C A1301 22.287 136.442 51.196 1.00 44.00 O
ATOM 26 OP2 C A1301 20.366 136.591 49.536 1.00 45.58 O
ATOM 27 O5' C A1301 20.846 134.451 50.656 1.00 39.86 O
TER
ATOM 1 O3' G B1271 6.101 128.177 54.137 1.00 39.71 O
ATOM 2 P A B1272 5.753 129.611 53.512 1.00 40.53 P
ATOM 3 OP1 A B1272 4.729 130.252 54.389 1.00 39.80 O
ATOM 4 OP2 A B1272 5.477 129.431 52.071 1.00 39.76 O
ATOM 5 O5' A B1272 7.109 130.430 53.658 1.00 40.59 O
ATOM 6 C5' A B1272 7.538 130.911 54.940 1.00 41.08 C
ATOM 7 C4' A B1272 8.608 131.956 54.774 1.00 40.80 C
ATOM 8 O4' A B1272 9.833 131.351 54.288 1.00 41.46 O
ATOM 9 C3' A B1272 8.307 133.033 53.753 1.00 41.20 C
ATOM 10 O3' A B1272 7.457 134.029 54.298 1.00 43.14 O
ATOM 11 C2' A B1272 9.697 133.565 53.440 1.00 39.98 C
ATOM 12 O2' A B1272 10.162 134.419 54.464 1.00 41.27 O
ATOM 13 C1' A B1272 10.518 132.275 53.458 1.00 39.83 C
ATOM 14 N9 A B1272 10.691 131.662 52.141 1.00 41.58 N
ATOM 15 C8 A B1272 9.987 130.612 51.597 1.00 40.65 C
ATOM 16 N7 A B1272 10.403 130.260 50.405 1.00 42.40 N
ATOM 17 C5 A B1272 11.449 131.137 50.142 1.00 41.11 C
ATOM 18 C6 A B1272 12.314 131.276 49.044 1.00 41.23 C
ATOM 19 N6 A B1272 12.282 130.488 47.968 1.00 39.74 N
ATOM 20 N1 A B1272 13.234 132.265 49.092 1.00 41.83 N
ATOM 21 C2 A B1272 13.281 133.044 50.178 1.00 41.00 C
ATOM 22 N3 A B1272 12.534 133.003 51.276 1.00 40.66 N
ATOM 23 C4 A B1272 11.626 132.016 51.196 1.00 40.91 C
ATOM 24 P U B1273 6.450 134.830 53.338 1.00 43.92 P
ATOM 25 OP1 U B1273 5.070 134.538 53.784 1.00 43.02 O
ATOM 26 OP2 U B1273 6.833 134.593 51.913 1.00 44.45 O
ATOM 27 O5' U B1273 6.757 136.350 53.675 1.00 43.21 O
TER
Atoms:
OP1: (19.968,142.500,53.948)
OP2: (17.805,142.406,52.569)
C3': (19.467,137.675,52.139)
C1': (17.604,137.126,53.471)
C5': (20.038,139.548,53.771)
O4': (18.554,137.709,54.337)
C8: (15.833,138.634,54.528)
O2': (17.463,136.768,51.090)
C6: (12.932,136.667,54.736)
C5: (14.158,137.328,54.575)
C4: (15.180,136.617,53.973)
P: (18.713,141.794,53.567)
C4': (19.735,138.090,53.575)
C2': (17.943,137.656,52.079)
C2: (13.913,134.842,53.716)
N1: (12.840,135.401,54.285)
N3: (15.122,135.355,53.514)
N6: (11.862,137.220,55.311)
N7: (14.580,138.604,54.916)
N9: (16.267,137.458,53.963)
O5': (19.104,140.349,53.040)
O3': (19.957,136.365,51.982)
OP2: (17.805,142.406,52.569)
C3': (19.467,137.675,52.139)
C1': (17.604,137.126,53.471)
C5': (20.038,139.548,53.771)
O4': (18.554,137.709,54.337)
C8: (15.833,138.634,54.528)
O2': (17.463,136.768,51.090)
C6: (12.932,136.667,54.736)
C5: (14.158,137.328,54.575)
C4: (15.180,136.617,53.973)
P: (18.713,141.794,53.567)
C4': (19.735,138.090,53.575)
C2': (17.943,137.656,52.079)
C2: (13.913,134.842,53.716)
N1: (12.840,135.401,54.285)
N3: (15.122,135.355,53.514)
N6: (11.862,137.220,55.311)
N7: (14.580,138.604,54.916)
N9: (16.267,137.458,53.963)
O5': (19.104,140.349,53.040)
O3': (19.957,136.365,51.982)
OP1: (4.729,130.252,54.389)
OP2: (5.477,129.431,52.071)
C3': (8.307,133.033,53.753)
C1': (10.518,132.275,53.458)
C5': (7.538,130.911,54.940)
O4': (9.833,131.351,54.288)
C8: (9.987,130.612,51.597)
O2': (10.162,134.419,54.464)
C6: (12.314,131.276,49.044)
C5: (11.449,131.137,50.142)
C4: (11.626,132.016,51.196)
P: (5.753,129.611,53.512)
C4': (8.608,131.956,54.774)
C2': (9.697,133.565,53.440)
C2: (13.281,133.044,50.178)
N1: (13.234,132.265,49.092)
N3: (12.534,133.003,51.276)
N6: (12.282,130.488,47.968)
N7: (10.403,130.260,50.405)
N9: (10.691,131.662,52.141)
O5': (7.109,130.430,53.658)
O3': (7.457,134.029,54.298)
OP2: (5.477,129.431,52.071)
C3': (8.307,133.033,53.753)
C1': (10.518,132.275,53.458)
C5': (7.538,130.911,54.940)
O4': (9.833,131.351,54.288)
C8: (9.987,130.612,51.597)
O2': (10.162,134.419,54.464)
C6: (12.314,131.276,49.044)
C5: (11.449,131.137,50.142)
C4: (11.626,132.016,51.196)
P: (5.753,129.611,53.512)
C4': (8.608,131.956,54.774)
C2': (9.697,133.565,53.440)
C2: (13.281,133.044,50.178)
N1: (13.234,132.265,49.092)
N3: (12.534,133.003,51.276)
N6: (12.282,130.488,47.968)
N7: (10.403,130.260,50.405)
N9: (10.691,131.662,52.141)
O5': (7.109,130.430,53.658)
O3': (7.457,134.029,54.298)
Image (generated by PyMOL):