Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YZ9:C3:C4
Extra
PDB:
ATOM 1 O3' A A 2 33.300 13.844 59.199 1.00 64.98 O
ATOM 2 P A A 3 31.907 14.326 58.563 1.00 63.58 P
ATOM 3 OP1 A A 3 30.831 14.083 59.556 1.00 65.56 O
ATOM 4 OP2 A A 3 31.809 13.719 57.214 1.00 53.46 O
ATOM 5 O5' A A 3 32.096 15.899 58.383 1.00 60.32 O
ATOM 6 C5' A A 3 32.279 16.748 59.513 1.00 52.95 C
ATOM 7 C4' A A 3 32.511 18.174 59.066 1.00 52.10 C
ATOM 8 O4' A A 3 33.766 18.257 58.342 1.00 51.95 O
ATOM 9 C3' A A 3 31.505 18.739 58.078 1.00 47.65 C
ATOM 10 O3' A A 3 30.316 19.177 58.713 1.00 51.87 O
ATOM 11 C2' A A 3 32.293 19.894 57.481 1.00 54.23 C
ATOM 12 O2' A A 3 32.383 20.998 58.362 1.00 56.01 O
ATOM 13 C1' A A 3 33.670 19.248 57.330 1.00 50.27 C
ATOM 14 N9 A A 3 33.847 18.590 56.036 1.00 49.65 N
ATOM 15 C8 A A 3 33.683 17.257 55.743 1.00 46.37 C
ATOM 16 N7 A A 3 33.932 16.956 54.491 1.00 47.32 N
ATOM 17 C5 A A 3 34.283 18.173 53.918 1.00 46.95 C
ATOM 18 C6 A A 3 34.670 18.533 52.609 1.00 45.12 C
ATOM 19 N6 A A 3 34.789 17.663 51.600 1.00 40.35 N
ATOM 20 N1 A A 3 34.938 19.833 52.371 1.00 41.15 N
ATOM 21 C2 A A 3 34.832 20.706 53.384 1.00 45.28 C
ATOM 22 N3 A A 3 34.491 20.490 54.652 1.00 46.81 N
ATOM 23 C4 A A 3 34.226 19.189 54.857 1.00 46.65 C
ATOM 24 P C A 4 28.913 19.046 57.940 1.00 54.50 P
ATOM 25 OP1 C A 4 27.838 19.315 58.923 1.00 54.77 O
ATOM 26 OP2 C A 4 28.919 17.765 57.193 1.00 49.62 O
ATOM 27 O5' C A 4 28.955 20.212 56.855 1.00 51.25 O
TER
ATOM 1 O3' A B 3 30.316 19.177 58.713 1.00 51.87 O
ATOM 2 P C B 4 28.913 19.046 57.940 1.00 54.50 P
ATOM 3 OP1 C B 4 27.838 19.315 58.923 1.00 54.77 O
ATOM 4 OP2 C B 4 28.919 17.765 57.193 1.00 49.62 O
ATOM 5 O5' C B 4 28.955 20.212 56.855 1.00 51.25 O
ATOM 6 C5' C B 4 29.166 21.564 57.240 1.00 44.01 C
ATOM 7 C4' C B 4 29.605 22.381 56.049 1.00 41.19 C
ATOM 8 O4' C B 4 30.833 21.811 55.522 1.00 36.88 O
ATOM 9 C3' C B 4 28.677 22.389 54.840 1.00 38.98 C
ATOM 10 O3' C B 4 27.605 23.315 54.996 1.00 38.60 O
ATOM 11 C2' C B 4 29.634 22.801 53.729 1.00 39.79 C
ATOM 12 O2' C B 4 29.922 24.188 53.751 1.00 39.85 O
ATOM 13 C1' C B 4 30.892 22.018 54.118 1.00 44.60 C
ATOM 14 N1 C B 4 30.996 20.705 53.453 1.00 41.77 N
ATOM 15 C2 C B 4 31.557 20.646 52.172 1.00 44.74 C
ATOM 16 O2 C B 4 31.936 21.699 51.639 1.00 38.82 O
ATOM 17 N3 C B 4 31.671 19.446 51.550 1.00 36.76 N
ATOM 18 C4 C B 4 31.248 18.335 52.161 1.00 42.14 C
ATOM 19 N4 C B 4 31.388 17.171 51.513 1.00 38.85 N
ATOM 20 C5 C B 4 30.666 18.366 53.463 1.00 37.07 C
ATOM 21 C6 C B 4 30.560 19.562 54.067 1.00 38.83 C
ATOM 22 P U B 5 26.294 23.188 54.063 1.00 42.79 P
ATOM 23 OP1 U B 5 25.306 24.205 54.516 1.00 39.39 O
ATOM 24 OP2 U B 5 25.884 21.758 54.004 1.00 42.71 O
ATOM 25 O5' U B 5 26.827 23.592 52.618 1.00 40.02 O
TER
ATOM 2 P A A 3 31.907 14.326 58.563 1.00 63.58 P
ATOM 3 OP1 A A 3 30.831 14.083 59.556 1.00 65.56 O
ATOM 4 OP2 A A 3 31.809 13.719 57.214 1.00 53.46 O
ATOM 5 O5' A A 3 32.096 15.899 58.383 1.00 60.32 O
ATOM 6 C5' A A 3 32.279 16.748 59.513 1.00 52.95 C
ATOM 7 C4' A A 3 32.511 18.174 59.066 1.00 52.10 C
ATOM 8 O4' A A 3 33.766 18.257 58.342 1.00 51.95 O
ATOM 9 C3' A A 3 31.505 18.739 58.078 1.00 47.65 C
ATOM 10 O3' A A 3 30.316 19.177 58.713 1.00 51.87 O
ATOM 11 C2' A A 3 32.293 19.894 57.481 1.00 54.23 C
ATOM 12 O2' A A 3 32.383 20.998 58.362 1.00 56.01 O
ATOM 13 C1' A A 3 33.670 19.248 57.330 1.00 50.27 C
ATOM 14 N9 A A 3 33.847 18.590 56.036 1.00 49.65 N
ATOM 15 C8 A A 3 33.683 17.257 55.743 1.00 46.37 C
ATOM 16 N7 A A 3 33.932 16.956 54.491 1.00 47.32 N
ATOM 17 C5 A A 3 34.283 18.173 53.918 1.00 46.95 C
ATOM 18 C6 A A 3 34.670 18.533 52.609 1.00 45.12 C
ATOM 19 N6 A A 3 34.789 17.663 51.600 1.00 40.35 N
ATOM 20 N1 A A 3 34.938 19.833 52.371 1.00 41.15 N
ATOM 21 C2 A A 3 34.832 20.706 53.384 1.00 45.28 C
ATOM 22 N3 A A 3 34.491 20.490 54.652 1.00 46.81 N
ATOM 23 C4 A A 3 34.226 19.189 54.857 1.00 46.65 C
ATOM 24 P C A 4 28.913 19.046 57.940 1.00 54.50 P
ATOM 25 OP1 C A 4 27.838 19.315 58.923 1.00 54.77 O
ATOM 26 OP2 C A 4 28.919 17.765 57.193 1.00 49.62 O
ATOM 27 O5' C A 4 28.955 20.212 56.855 1.00 51.25 O
TER
ATOM 1 O3' A B 3 30.316 19.177 58.713 1.00 51.87 O
ATOM 2 P C B 4 28.913 19.046 57.940 1.00 54.50 P
ATOM 3 OP1 C B 4 27.838 19.315 58.923 1.00 54.77 O
ATOM 4 OP2 C B 4 28.919 17.765 57.193 1.00 49.62 O
ATOM 5 O5' C B 4 28.955 20.212 56.855 1.00 51.25 O
ATOM 6 C5' C B 4 29.166 21.564 57.240 1.00 44.01 C
ATOM 7 C4' C B 4 29.605 22.381 56.049 1.00 41.19 C
ATOM 8 O4' C B 4 30.833 21.811 55.522 1.00 36.88 O
ATOM 9 C3' C B 4 28.677 22.389 54.840 1.00 38.98 C
ATOM 10 O3' C B 4 27.605 23.315 54.996 1.00 38.60 O
ATOM 11 C2' C B 4 29.634 22.801 53.729 1.00 39.79 C
ATOM 12 O2' C B 4 29.922 24.188 53.751 1.00 39.85 O
ATOM 13 C1' C B 4 30.892 22.018 54.118 1.00 44.60 C
ATOM 14 N1 C B 4 30.996 20.705 53.453 1.00 41.77 N
ATOM 15 C2 C B 4 31.557 20.646 52.172 1.00 44.74 C
ATOM 16 O2 C B 4 31.936 21.699 51.639 1.00 38.82 O
ATOM 17 N3 C B 4 31.671 19.446 51.550 1.00 36.76 N
ATOM 18 C4 C B 4 31.248 18.335 52.161 1.00 42.14 C
ATOM 19 N4 C B 4 31.388 17.171 51.513 1.00 38.85 N
ATOM 20 C5 C B 4 30.666 18.366 53.463 1.00 37.07 C
ATOM 21 C6 C B 4 30.560 19.562 54.067 1.00 38.83 C
ATOM 22 P U B 5 26.294 23.188 54.063 1.00 42.79 P
ATOM 23 OP1 U B 5 25.306 24.205 54.516 1.00 39.39 O
ATOM 24 OP2 U B 5 25.884 21.758 54.004 1.00 42.71 O
ATOM 25 O5' U B 5 26.827 23.592 52.618 1.00 40.02 O
TER
Atoms:
OP1: (30.831,14.083,59.556)
OP2: (31.809,13.719,57.214)
C3': (31.505,18.739,58.078)
C1': (33.670,19.248,57.330)
C5': (32.279,16.748,59.513)
O4': (33.766,18.257,58.342)
C8: (33.683,17.257,55.743)
O2': (32.383,20.998,58.362)
C6: (34.670,18.533,52.609)
C5: (34.283,18.173,53.918)
C4: (34.226,19.189,54.857)
P: (31.907,14.326,58.563)
C4': (32.511,18.174,59.066)
C2': (32.293,19.894,57.481)
C2: (34.832,20.706,53.384)
N1: (34.938,19.833,52.371)
N3: (34.491,20.490,54.652)
N6: (34.789,17.663,51.600)
N7: (33.932,16.956,54.491)
N9: (33.847,18.590,56.036)
O5': (32.096,15.899,58.383)
O3': (30.316,19.177,58.713)
OP2: (31.809,13.719,57.214)
C3': (31.505,18.739,58.078)
C1': (33.670,19.248,57.330)
C5': (32.279,16.748,59.513)
O4': (33.766,18.257,58.342)
C8: (33.683,17.257,55.743)
O2': (32.383,20.998,58.362)
C6: (34.670,18.533,52.609)
C5: (34.283,18.173,53.918)
C4: (34.226,19.189,54.857)
P: (31.907,14.326,58.563)
C4': (32.511,18.174,59.066)
C2': (32.293,19.894,57.481)
C2: (34.832,20.706,53.384)
N1: (34.938,19.833,52.371)
N3: (34.491,20.490,54.652)
N6: (34.789,17.663,51.600)
N7: (33.932,16.956,54.491)
N9: (33.847,18.590,56.036)
O5': (32.096,15.899,58.383)
O3': (30.316,19.177,58.713)
C2: (31.557,20.646,52.172)
OP1: (27.838,19.315,58.923)
OP2: (28.919,17.765,57.193)
C4: (31.248,18.335,52.161)
O5': (28.955,20.212,56.855)
C3': (28.677,22.389,54.840)
C1': (30.892,22.018,54.118)
O4': (30.833,21.811,55.522)
C5': (29.166,21.564,57.240)
P: (28.913,19.046,57.940)
O2: (31.936,21.699,51.639)
C4': (29.605,22.381,56.049)
C2': (29.634,22.801,53.729)
O2': (29.922,24.188,53.751)
N1: (30.996,20.705,53.453)
N3: (31.671,19.446,51.550)
N4: (31.388,17.171,51.513)
C6: (30.560,19.562,54.067)
C5: (30.666,18.366,53.463)
O3': (27.605,23.315,54.996)
OP1: (27.838,19.315,58.923)
OP2: (28.919,17.765,57.193)
C4: (31.248,18.335,52.161)
O5': (28.955,20.212,56.855)
C3': (28.677,22.389,54.840)
C1': (30.892,22.018,54.118)
O4': (30.833,21.811,55.522)
C5': (29.166,21.564,57.240)
P: (28.913,19.046,57.940)
O2: (31.936,21.699,51.639)
C4': (29.605,22.381,56.049)
C2': (29.634,22.801,53.729)
O2': (29.922,24.188,53.751)
N1: (30.996,20.705,53.453)
N3: (31.671,19.446,51.550)
N4: (31.388,17.171,51.513)
C6: (30.560,19.562,54.067)
C5: (30.666,18.366,53.463)
O3': (27.605,23.315,54.996)
Image (generated by PyMOL):