ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OE8:B4:B5

Extra

PDB:
ATOM 1 O3' U A 3 18.277 -10.565 51.995 1.00 24.84 O
ATOM 2 P A A 4 17.577 -10.096 50.628 1.00 25.26 P
ATOM 3 OP1 A A 4 17.447 -11.287 49.761 1.00 23.01 O
ATOM 4 OP2 A A 4 18.277 -8.905 50.098 1.00 23.30 O
ATOM 5 O5' A A 4 16.162 -9.519 51.095 1.00 21.96 O
ATOM 6 C5' A A 4 15.210 -10.375 51.657 1.00 22.25 C
ATOM 7 C4' A A 4 13.953 -9.597 51.945 1.00 21.31 C
ATOM 8 O4' A A 4 14.110 -8.720 53.112 1.00 20.28 O
ATOM 9 C3' A A 4 13.496 -8.696 50.821 1.00 20.76 C
ATOM 10 O3' A A 4 12.771 -9.437 49.846 1.00 20.68 O
ATOM 11 C2' A A 4 12.598 -7.753 51.588 1.00 20.47 C
ATOM 12 O2' A A 4 11.363 -8.349 51.953 1.00 20.96 O
ATOM 13 C1' A A 4 13.407 -7.541 52.855 1.00 20.03 C
ATOM 14 N9 A A 4 14.385 -6.458 52.790 1.00 21.31 N
ATOM 15 C8 A A 4 15.696 -6.533 52.440 1.00 23.03 C
ATOM 16 N7 A A 4 16.324 -5.373 52.513 1.00 23.83 N
ATOM 17 C5 A A 4 15.344 -4.491 52.912 1.00 21.23 C
ATOM 18 C6 A A 4 15.334 -3.106 53.150 1.00 24.11 C
ATOM 19 N6 A A 4 16.374 -2.295 53.058 1.00 25.35 N
ATOM 20 N1 A A 4 14.174 -2.542 53.534 1.00 25.47 N
ATOM 21 C2 A A 4 13.084 -3.327 53.676 1.00 24.18 C
ATOM 22 N3 A A 4 12.948 -4.643 53.475 1.00 23.94 N
ATOM 23 C4 A A 4 14.141 -5.160 53.091 1.00 22.82 C
ATOM 24 P C A 5 12.758 -8.944 48.313 1.00 21.27 P
ATOM 25 OP1 C A 5 12.200 -10.070 47.536 1.00 22.57 O
ATOM 26 OP2 C A 5 14.031 -8.334 47.915 1.00 19.70 O
ATOM 27 O5' C A 5 11.685 -7.738 48.264 1.00 20.68 O
TER

ATOM 1 O3' A B 4 12.771 -9.437 49.846 1.00 20.68 O
ATOM 2 P C B 5 12.758 -8.944 48.313 1.00 21.27 P
ATOM 3 OP1 C B 5 12.200 -10.070 47.536 1.00 22.57 O
ATOM 4 OP2 C B 5 14.031 -8.334 47.915 1.00 19.70 O
ATOM 5 O5' C B 5 11.685 -7.738 48.264 1.00 20.68 O
ATOM 6 C5' C B 5 10.304 -7.994 48.650 1.00 22.95 C
ATOM 7 C4' C B 5 9.601 -6.675 48.893 1.00 23.55 C
ATOM 8 O4' C B 5 10.174 -6.004 50.051 1.00 23.09 O
ATOM 9 C3' C B 5 9.796 -5.636 47.787 1.00 22.71 C
ATOM 10 O3' C B 5 8.888 -5.834 46.734 1.00 20.18 O
ATOM 11 C2' C B 5 9.461 -4.366 48.528 1.00 22.65 C
ATOM 12 O2' C B 5 8.071 -4.292 48.690 1.00 26.78 O
ATOM 13 C1' C B 5 10.160 -4.612 49.832 1.00 24.56 C
ATOM 14 N1 C B 5 11.570 -4.050 49.829 1.00 23.40 N
ATOM 15 C2 C B 5 11.733 -2.741 50.213 1.00 25.31 C
ATOM 16 O2 C B 5 10.713 -2.071 50.487 1.00 23.73 O
ATOM 17 N3 C B 5 12.993 -2.232 50.238 1.00 24.13 N
ATOM 18 C4 C B 5 14.057 -3.016 49.930 1.00 24.39 C
ATOM 19 N4 C B 5 15.286 -2.437 50.004 1.00 20.18 N
ATOM 20 C5 C B 5 13.886 -4.360 49.516 1.00 21.20 C
ATOM 21 C6 C B 5 12.641 -4.852 49.498 1.00 22.88 C
ATOM 22 P U B 6 9.231 -5.363 45.261 1.00 23.19 P
ATOM 23 OP1 U B 6 8.141 -5.806 44.350 1.00 23.66 O
ATOM 24 OP2 U B 6 10.622 -5.702 44.884 1.00 22.01 O
ATOM 25 O5' U B 6 9.205 -3.751 45.367 1.00 23.77 O
TER

Atoms:
OP1: (17.447,-11.287,49.761)
OP2: (18.277,-8.905,50.098)
C3': (13.496,-8.696,50.821)
C1': (13.407,-7.541,52.855)
C5': (15.210,-10.375,51.657)
O4': (14.110,-8.720,53.112)
C8: (15.696,-6.533,52.440)
O2': (11.363,-8.349,51.953)
C6: (15.334,-3.106,53.150)
C5: (15.344,-4.491,52.912)
C4: (14.141,-5.160,53.091)
P: (17.577,-10.096,50.628)
C4': (13.953,-9.597,51.945)
C2': (12.598,-7.753,51.588)
C2: (13.084,-3.327,53.676)
N1: (14.174,-2.542,53.534)
N3: (12.948,-4.643,53.475)
N6: (16.374,-2.295,53.058)
N7: (16.324,-5.373,52.513)
N9: (14.385,-6.458,52.790)
O5': (16.162,-9.519,51.095)
O3': (12.771,-9.437,49.846)
C2: (11.733,-2.741,50.213)
OP1: (12.200,-10.070,47.536)
OP2: (14.031,-8.334,47.915)
C4: (14.057,-3.016,49.930)
O5': (11.685,-7.738,48.264)
C3': (9.796,-5.636,47.787)
C1': (10.160,-4.612,49.832)
O4': (10.174,-6.004,50.051)
C5': (10.304,-7.994,48.650)
P: (12.758,-8.944,48.313)
O2: (10.713,-2.071,50.487)
C4': (9.601,-6.675,48.893)
C2': (9.461,-4.366,48.528)
O2': (8.071,-4.292,48.690)
N1: (11.570,-4.050,49.829)
N3: (12.993,-2.232,50.238)
N4: (15.286,-2.437,50.004)
C6: (12.641,-4.852,49.498)
C5: (13.886,-4.360,49.516)
O3': (8.888,-5.834,46.734)
Image (generated by PyMOL):
PyMOL image
show in jmol