ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A303:A304

Extra

PDB:
ATOM 1 O3' C A 302 128.706 68.413 -10.386 1.00 25.95 O
ATOM 2 P A A 303 128.596 66.834 -10.169 1.00 27.42 P
ATOM 3 OP1 A A 303 128.181 66.235 -11.478 1.00 27.35 O
ATOM 4 OP2 A A 303 127.788 66.602 -8.939 1.00 27.58 O
ATOM 5 O5' A A 303 130.083 66.395 -9.881 1.00 26.55 O
ATOM 6 C5' A A 303 131.070 66.470 -10.902 1.00 25.39 C
ATOM 7 C4' A A 303 132.435 66.220 -10.322 1.00 25.51 C
ATOM 8 O4' A A 303 132.723 67.219 -9.311 1.00 25.70 O
ATOM 9 C3' A A 303 132.631 64.903 -9.595 1.00 26.26 C
ATOM 10 O3' A A 303 132.884 63.847 -10.497 1.00 27.37 O
ATOM 11 C2' A A 303 133.821 65.211 -8.694 1.00 25.33 C
ATOM 12 O2' A A 303 135.040 65.182 -9.411 1.00 24.40 O
ATOM 13 C1' A A 303 133.535 66.657 -8.295 1.00 23.77 C
ATOM 14 N9 A A 303 132.821 66.771 -7.021 1.00 22.16 N
ATOM 15 C8 A A 303 131.478 66.966 -6.808 1.00 20.90 C
ATOM 16 N7 A A 303 131.150 67.048 -5.539 1.00 19.72 N
ATOM 17 C5 A A 303 132.356 66.893 -4.874 1.00 19.61 C
ATOM 18 C6 A A 303 132.692 66.893 -3.505 1.00 20.48 C
ATOM 19 N6 A A 303 131.806 67.065 -2.519 1.00 19.30 N
ATOM 20 N1 A A 303 133.989 66.711 -3.179 1.00 19.95 N
ATOM 21 C2 A A 303 134.880 66.538 -4.162 1.00 21.66 C
ATOM 22 N3 A A 303 134.688 66.517 -5.480 1.00 22.34 N
ATOM 23 C4 A A 303 133.391 66.709 -5.773 1.00 21.00 C
ATOM 24 P C A 304 132.324 62.380 -10.170 1.00 26.95 P
ATOM 25 OP1 C A 304 132.467 61.597 -11.434 1.00 26.71 O
ATOM 26 OP2 C A 304 130.992 62.519 -9.538 1.00 26.49 O
ATOM 27 O5' C A 304 133.349 61.844 -9.086 1.00 26.21 O
TER

ATOM 1 O3' A B 303 132.884 63.847 -10.497 1.00 27.37 O
ATOM 2 P C B 304 132.324 62.380 -10.170 1.00 26.95 P
ATOM 3 OP1 C B 304 132.467 61.597 -11.434 1.00 26.71 O
ATOM 4 OP2 C B 304 130.992 62.519 -9.538 1.00 26.49 O
ATOM 5 O5' C B 304 133.349 61.844 -9.086 1.00 26.21 O
ATOM 6 C5' C B 304 134.737 61.727 -9.405 1.00 27.35 C
ATOM 7 C4' C B 304 135.564 61.580 -8.150 1.00 27.77 C
ATOM 8 O4' C B 304 135.432 62.769 -7.335 1.00 26.63 O
ATOM 9 C3' C B 304 135.210 60.441 -7.202 1.00 28.60 C
ATOM 10 O3' C B 304 135.751 59.177 -7.598 1.00 30.21 O
ATOM 11 C2' C B 304 135.818 60.916 -5.894 1.00 27.46 C
ATOM 12 O2' C B 304 137.210 60.669 -5.850 1.00 29.90 O
ATOM 13 C1' C B 304 135.578 62.421 -5.970 1.00 26.35 C
ATOM 14 N1 C B 304 134.364 62.811 -5.240 1.00 23.79 N
ATOM 15 C2 C B 304 134.457 63.065 -3.865 1.00 23.74 C
ATOM 16 O2 C B 304 135.559 62.964 -3.308 1.00 24.62 O
ATOM 17 N3 C B 304 133.346 63.410 -3.177 1.00 23.49 N
ATOM 18 C4 C B 304 132.174 63.500 -3.809 1.00 21.93 C
ATOM 19 N4 C B 304 131.108 63.836 -3.096 1.00 19.61 N
ATOM 20 C5 C B 304 132.048 63.247 -5.205 1.00 23.38 C
ATOM 21 C6 C B 304 133.160 62.914 -5.877 1.00 24.78 C
ATOM 22 P A B 305 135.027 57.825 -7.115 1.00 29.76 P
ATOM 23 OP1 A B 305 135.671 56.675 -7.846 1.00 33.17 O
ATOM 24 OP2 A B 305 133.560 58.017 -7.236 1.00 28.09 O
ATOM 25 O5' A B 305 135.425 57.731 -5.580 1.00 29.24 O
TER

Atoms:
OP1: (128.181,66.235,-11.478)
OP2: (127.788,66.602,-8.939)
C3': (132.631,64.903,-9.595)
C1': (133.535,66.657,-8.295)
C5': (131.070,66.470,-10.902)
O4': (132.723,67.219,-9.311)
C8: (131.478,66.966,-6.808)
O2': (135.040,65.182,-9.411)
C6: (132.692,66.893,-3.505)
C5: (132.356,66.893,-4.874)
C4: (133.391,66.709,-5.773)
P: (128.596,66.834,-10.169)
C4': (132.435,66.220,-10.322)
C2': (133.821,65.211,-8.694)
C2: (134.880,66.538,-4.162)
N1: (133.989,66.711,-3.179)
N3: (134.688,66.517,-5.480)
N6: (131.806,67.065,-2.519)
N7: (131.150,67.048,-5.539)
N9: (132.821,66.771,-7.021)
O5': (130.083,66.395,-9.881)
O3': (132.884,63.847,-10.497)
C2: (134.457,63.065,-3.865)
OP1: (132.467,61.597,-11.434)
OP2: (130.992,62.519,-9.538)
C4: (132.174,63.500,-3.809)
O5': (133.349,61.844,-9.086)
C3': (135.210,60.441,-7.202)
C1': (135.578,62.421,-5.970)
O4': (135.432,62.769,-7.335)
C5': (134.737,61.727,-9.405)
P: (132.324,62.380,-10.170)
O2: (135.559,62.964,-3.308)
C4': (135.564,61.580,-8.150)
C2': (135.818,60.916,-5.894)
O2': (137.210,60.669,-5.850)
N1: (134.364,62.811,-5.240)
N3: (133.346,63.410,-3.177)
N4: (131.108,63.836,-3.096)
C6: (133.160,62.914,-5.877)
C5: (132.048,63.247,-5.205)
O3': (135.751,59.177,-7.598)
Image (generated by PyMOL):
PyMOL image
show in jmol