Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0550:0551
Extra
PDB:
ATOM 1 O3' G A 549 -17.718 102.702 100.076 1.00 59.34 O
ATOM 2 P A A 550 -16.781 101.402 99.968 1.00 59.76 P
ATOM 3 OP1 A A 550 -17.598 100.195 100.267 1.00 59.12 O
ATOM 4 OP2 A A 550 -15.564 101.674 100.772 1.00 57.42 O
ATOM 5 O5' A A 550 -16.381 101.345 98.423 1.00 57.53 O
ATOM 6 C5' A A 550 -17.333 100.928 97.420 1.00 56.34 C
ATOM 7 C4' A A 550 -16.638 100.688 96.092 1.00 56.75 C
ATOM 8 O4' A A 550 -16.051 101.928 95.609 1.00 56.84 O
ATOM 9 C3' A A 550 -15.463 99.727 96.132 1.00 56.22 C
ATOM 10 O3' A A 550 -15.864 98.371 96.089 1.00 55.15 O
ATOM 11 C2' A A 550 -14.662 100.131 94.904 1.00 55.35 C
ATOM 12 O2' A A 550 -15.189 99.605 93.705 1.00 53.54 O
ATOM 13 C1' A A 550 -14.838 101.649 94.924 1.00 55.93 C
ATOM 14 N9 A A 550 -13.748 102.343 95.615 1.00 57.44 N
ATOM 15 C8 A A 550 -13.755 102.863 96.886 1.00 57.92 C
ATOM 16 N7 A A 550 -12.634 103.450 97.225 1.00 56.76 N
ATOM 17 C5 A A 550 -11.829 103.302 96.105 1.00 56.94 C
ATOM 18 C6 A A 550 -10.516 103.707 95.831 1.00 54.90 C
ATOM 19 N6 A A 550 -9.756 104.366 96.700 1.00 52.96 N
ATOM 20 N1 A A 550 -10.005 103.404 94.619 1.00 55.13 N
ATOM 21 C2 A A 550 -10.767 102.732 93.752 1.00 55.22 C
ATOM 22 N3 A A 550 -12.014 102.291 93.893 1.00 57.66 N
ATOM 23 C4 A A 550 -12.497 102.615 95.107 1.00 57.61 C
ATOM 24 P C A 551 -14.966 97.271 96.823 1.00 56.34 P
ATOM 25 OP1 C A 551 -15.579 95.925 96.643 1.00 57.66 O
ATOM 26 OP2 C A 551 -14.694 97.786 98.195 1.00 55.28 O
ATOM 27 O5' C A 551 -13.607 97.280 95.995 1.00 57.00 O
TER
ATOM 1 O3' A B 550 -15.864 98.371 96.089 1.00 55.15 O
ATOM 2 P C B 551 -14.966 97.271 96.823 1.00 56.34 P
ATOM 3 OP1 C B 551 -15.579 95.925 96.643 1.00 57.66 O
ATOM 4 OP2 C B 551 -14.694 97.786 98.195 1.00 55.28 O
ATOM 5 O5' C B 551 -13.607 97.280 95.995 1.00 57.00 O
ATOM 6 C5' C B 551 -13.596 96.948 94.595 1.00 54.90 C
ATOM 7 C4' C B 551 -12.227 97.194 94.010 1.00 53.32 C
ATOM 8 O4' C B 551 -11.899 98.603 94.117 1.00 53.57 O
ATOM 9 C3' C B 551 -11.072 96.505 94.713 1.00 52.83 C
ATOM 10 O3' C B 551 -10.938 95.159 94.291 1.00 51.97 O
ATOM 11 C2' C B 551 -9.886 97.350 94.275 1.00 53.04 C
ATOM 12 O2' C B 551 -9.459 97.029 92.966 1.00 53.76 O
ATOM 13 C1' C B 551 -10.500 98.752 94.279 1.00 52.71 C
ATOM 14 N1 C B 551 -10.242 99.516 95.514 1.00 54.12 N
ATOM 15 C2 C B 551 -9.119 100.350 95.561 1.00 54.81 C
ATOM 16 O2 C B 551 -8.379 100.418 94.566 1.00 56.37 O
ATOM 17 N3 C B 551 -8.866 101.055 96.684 1.00 54.03 N
ATOM 18 C4 C B 551 -9.678 100.946 97.738 1.00 55.18 C
ATOM 19 N4 C B 551 -9.383 101.655 98.830 1.00 55.50 N
ATOM 20 C5 C B 551 -10.827 100.107 97.720 1.00 53.90 C
ATOM 21 C6 C B 551 -11.070 99.418 96.598 1.00 54.60 C
ATOM 22 P G B 552 -10.728 94.009 95.385 1.00 55.54 P
ATOM 23 OP1 G B 552 -10.604 92.709 94.672 1.00 54.83 O
ATOM 24 OP2 G B 552 -11.774 94.188 96.425 1.00 57.25 O
ATOM 25 O5' G B 552 -9.337 94.361 96.077 1.00 56.31 O
TER
ATOM 2 P A A 550 -16.781 101.402 99.968 1.00 59.76 P
ATOM 3 OP1 A A 550 -17.598 100.195 100.267 1.00 59.12 O
ATOM 4 OP2 A A 550 -15.564 101.674 100.772 1.00 57.42 O
ATOM 5 O5' A A 550 -16.381 101.345 98.423 1.00 57.53 O
ATOM 6 C5' A A 550 -17.333 100.928 97.420 1.00 56.34 C
ATOM 7 C4' A A 550 -16.638 100.688 96.092 1.00 56.75 C
ATOM 8 O4' A A 550 -16.051 101.928 95.609 1.00 56.84 O
ATOM 9 C3' A A 550 -15.463 99.727 96.132 1.00 56.22 C
ATOM 10 O3' A A 550 -15.864 98.371 96.089 1.00 55.15 O
ATOM 11 C2' A A 550 -14.662 100.131 94.904 1.00 55.35 C
ATOM 12 O2' A A 550 -15.189 99.605 93.705 1.00 53.54 O
ATOM 13 C1' A A 550 -14.838 101.649 94.924 1.00 55.93 C
ATOM 14 N9 A A 550 -13.748 102.343 95.615 1.00 57.44 N
ATOM 15 C8 A A 550 -13.755 102.863 96.886 1.00 57.92 C
ATOM 16 N7 A A 550 -12.634 103.450 97.225 1.00 56.76 N
ATOM 17 C5 A A 550 -11.829 103.302 96.105 1.00 56.94 C
ATOM 18 C6 A A 550 -10.516 103.707 95.831 1.00 54.90 C
ATOM 19 N6 A A 550 -9.756 104.366 96.700 1.00 52.96 N
ATOM 20 N1 A A 550 -10.005 103.404 94.619 1.00 55.13 N
ATOM 21 C2 A A 550 -10.767 102.732 93.752 1.00 55.22 C
ATOM 22 N3 A A 550 -12.014 102.291 93.893 1.00 57.66 N
ATOM 23 C4 A A 550 -12.497 102.615 95.107 1.00 57.61 C
ATOM 24 P C A 551 -14.966 97.271 96.823 1.00 56.34 P
ATOM 25 OP1 C A 551 -15.579 95.925 96.643 1.00 57.66 O
ATOM 26 OP2 C A 551 -14.694 97.786 98.195 1.00 55.28 O
ATOM 27 O5' C A 551 -13.607 97.280 95.995 1.00 57.00 O
TER
ATOM 1 O3' A B 550 -15.864 98.371 96.089 1.00 55.15 O
ATOM 2 P C B 551 -14.966 97.271 96.823 1.00 56.34 P
ATOM 3 OP1 C B 551 -15.579 95.925 96.643 1.00 57.66 O
ATOM 4 OP2 C B 551 -14.694 97.786 98.195 1.00 55.28 O
ATOM 5 O5' C B 551 -13.607 97.280 95.995 1.00 57.00 O
ATOM 6 C5' C B 551 -13.596 96.948 94.595 1.00 54.90 C
ATOM 7 C4' C B 551 -12.227 97.194 94.010 1.00 53.32 C
ATOM 8 O4' C B 551 -11.899 98.603 94.117 1.00 53.57 O
ATOM 9 C3' C B 551 -11.072 96.505 94.713 1.00 52.83 C
ATOM 10 O3' C B 551 -10.938 95.159 94.291 1.00 51.97 O
ATOM 11 C2' C B 551 -9.886 97.350 94.275 1.00 53.04 C
ATOM 12 O2' C B 551 -9.459 97.029 92.966 1.00 53.76 O
ATOM 13 C1' C B 551 -10.500 98.752 94.279 1.00 52.71 C
ATOM 14 N1 C B 551 -10.242 99.516 95.514 1.00 54.12 N
ATOM 15 C2 C B 551 -9.119 100.350 95.561 1.00 54.81 C
ATOM 16 O2 C B 551 -8.379 100.418 94.566 1.00 56.37 O
ATOM 17 N3 C B 551 -8.866 101.055 96.684 1.00 54.03 N
ATOM 18 C4 C B 551 -9.678 100.946 97.738 1.00 55.18 C
ATOM 19 N4 C B 551 -9.383 101.655 98.830 1.00 55.50 N
ATOM 20 C5 C B 551 -10.827 100.107 97.720 1.00 53.90 C
ATOM 21 C6 C B 551 -11.070 99.418 96.598 1.00 54.60 C
ATOM 22 P G B 552 -10.728 94.009 95.385 1.00 55.54 P
ATOM 23 OP1 G B 552 -10.604 92.709 94.672 1.00 54.83 O
ATOM 24 OP2 G B 552 -11.774 94.188 96.425 1.00 57.25 O
ATOM 25 O5' G B 552 -9.337 94.361 96.077 1.00 56.31 O
TER
Atoms:
OP1: (-17.598,100.195,100.267)
OP2: (-15.564,101.674,100.772)
C3': (-15.463,99.727,96.132)
C1': (-14.838,101.649,94.924)
C5': (-17.333,100.928,97.420)
O4': (-16.051,101.928,95.609)
C8: (-13.755,102.863,96.886)
O2': (-15.189,99.605,93.705)
C6: (-10.516,103.707,95.831)
C5: (-11.829,103.302,96.105)
C4: (-12.497,102.615,95.107)
P: (-16.781,101.402,99.968)
C4': (-16.638,100.688,96.092)
C2': (-14.662,100.131,94.904)
C2: (-10.767,102.732,93.752)
N1: (-10.005,103.404,94.619)
N3: (-12.014,102.291,93.893)
N6: (-9.756,104.366,96.700)
N7: (-12.634,103.450,97.225)
N9: (-13.748,102.343,95.615)
O5': (-16.381,101.345,98.423)
O3': (-15.864,98.371,96.089)
OP2: (-15.564,101.674,100.772)
C3': (-15.463,99.727,96.132)
C1': (-14.838,101.649,94.924)
C5': (-17.333,100.928,97.420)
O4': (-16.051,101.928,95.609)
C8: (-13.755,102.863,96.886)
O2': (-15.189,99.605,93.705)
C6: (-10.516,103.707,95.831)
C5: (-11.829,103.302,96.105)
C4: (-12.497,102.615,95.107)
P: (-16.781,101.402,99.968)
C4': (-16.638,100.688,96.092)
C2': (-14.662,100.131,94.904)
C2: (-10.767,102.732,93.752)
N1: (-10.005,103.404,94.619)
N3: (-12.014,102.291,93.893)
N6: (-9.756,104.366,96.700)
N7: (-12.634,103.450,97.225)
N9: (-13.748,102.343,95.615)
O5': (-16.381,101.345,98.423)
O3': (-15.864,98.371,96.089)
C2: (-9.119,100.350,95.561)
OP1: (-15.579,95.925,96.643)
OP2: (-14.694,97.786,98.195)
C4: (-9.678,100.946,97.738)
O5': (-13.607,97.280,95.995)
C3': (-11.072,96.505,94.713)
C1': (-10.500,98.752,94.279)
O4': (-11.899,98.603,94.117)
C5': (-13.596,96.948,94.595)
P: (-14.966,97.271,96.823)
O2: (-8.379,100.418,94.566)
C4': (-12.227,97.194,94.010)
C2': (-9.886,97.350,94.275)
O2': (-9.459,97.029,92.966)
N1: (-10.242,99.516,95.514)
N3: (-8.866,101.055,96.684)
N4: (-9.383,101.655,98.830)
C6: (-11.070,99.418,96.598)
C5: (-10.827,100.107,97.720)
O3': (-10.938,95.159,94.291)
OP1: (-15.579,95.925,96.643)
OP2: (-14.694,97.786,98.195)
C4: (-9.678,100.946,97.738)
O5': (-13.607,97.280,95.995)
C3': (-11.072,96.505,94.713)
C1': (-10.500,98.752,94.279)
O4': (-11.899,98.603,94.117)
C5': (-13.596,96.948,94.595)
P: (-14.966,97.271,96.823)
O2: (-8.379,100.418,94.566)
C4': (-12.227,97.194,94.010)
C2': (-9.886,97.350,94.275)
O2': (-9.459,97.029,92.966)
N1: (-10.242,99.516,95.514)
N3: (-8.866,101.055,96.684)
N4: (-9.383,101.655,98.830)
C6: (-11.070,99.418,96.598)
C5: (-10.827,100.107,97.720)
O3': (-10.938,95.159,94.291)
Image (generated by PyMOL):