Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1233:A1234
Extra
PDB:
ATOM 1 O3' C A1232 10.045 79.570 71.012 1.00 45.12 O
ATOM 2 P A A1233 9.559 79.688 69.489 1.00 46.37 P
ATOM 3 OP1 A A1233 9.514 78.287 69.007 1.00 47.07 O
ATOM 4 OP2 A A1233 10.370 80.685 68.743 1.00 46.15 O
ATOM 5 O5' A A1233 8.074 80.250 69.628 1.00 43.67 O
ATOM 6 C5' A A1233 7.040 79.432 70.197 1.00 43.62 C
ATOM 7 C4' A A1233 5.702 80.132 70.123 1.00 44.49 C
ATOM 8 O4' A A1233 5.664 81.263 71.027 1.00 44.39 O
ATOM 9 C3' A A1233 5.335 80.743 68.787 1.00 44.75 C
ATOM 10 O3' A A1233 4.870 79.767 67.882 1.00 46.17 O
ATOM 11 C2' A A1233 4.249 81.732 69.178 1.00 44.42 C
ATOM 12 O2' A A1233 3.012 81.099 69.439 1.00 44.97 O
ATOM 13 C1' A A1233 4.818 82.273 70.490 1.00 44.40 C
ATOM 14 N9 A A1233 5.615 83.488 70.300 1.00 44.56 N
ATOM 15 C8 A A1233 6.971 83.590 70.126 1.00 44.85 C
ATOM 16 N7 A A1233 7.397 84.825 70.005 1.00 44.66 N
ATOM 17 C5 A A1233 6.244 85.586 70.100 1.00 43.07 C
ATOM 18 C6 A A1233 6.023 86.966 70.047 1.00 42.31 C
ATOM 19 N6 A A1233 6.995 87.863 69.889 1.00 40.14 N
ATOM 20 N1 A A1233 4.750 87.403 70.162 1.00 43.42 N
ATOM 21 C2 A A1233 3.776 86.500 70.320 1.00 44.30 C
ATOM 22 N3 A A1233 3.861 85.175 70.390 1.00 44.69 N
ATOM 23 C4 A A1233 5.138 84.777 70.272 1.00 43.61 C
ATOM 24 P C A1234 5.216 79.921 66.332 1.00 47.45 P
ATOM 25 OP1 C A1234 4.650 78.761 65.620 1.00 47.75 O
ATOM 26 OP2 C A1234 6.674 80.200 66.232 1.00 49.54 O
ATOM 27 O5' C A1234 4.405 81.225 65.909 1.00 45.69 O
TER
ATOM 1 O3' A B1233 4.870 79.767 67.882 1.00 46.17 O
ATOM 2 P C B1234 5.216 79.921 66.332 1.00 47.45 P
ATOM 3 OP1 C B1234 4.650 78.761 65.620 1.00 47.75 O
ATOM 4 OP2 C B1234 6.674 80.200 66.232 1.00 49.54 O
ATOM 5 O5' C B1234 4.405 81.225 65.909 1.00 45.69 O
ATOM 6 C5' C B1234 2.969 81.216 65.888 1.00 44.54 C
ATOM 7 C4' C B1234 2.435 82.584 65.560 1.00 45.09 C
ATOM 8 O4' C B1234 2.718 83.516 66.634 1.00 45.05 O
ATOM 9 C3' C B1234 3.054 83.239 64.348 1.00 45.75 C
ATOM 10 O3' C B1234 2.511 82.730 63.148 1.00 49.11 O
ATOM 11 C2' C B1234 2.721 84.705 64.574 1.00 45.53 C
ATOM 12 O2' C B1234 1.405 85.036 64.193 1.00 45.44 O
ATOM 13 C1' C B1234 2.903 84.817 66.091 1.00 45.21 C
ATOM 14 N1 C B1234 4.266 85.274 66.405 1.00 45.33 N
ATOM 15 C2 C B1234 4.503 86.648 66.492 1.00 45.13 C
ATOM 16 O2 C B1234 3.540 87.428 66.403 1.00 44.94 O
ATOM 17 N3 C B1234 5.769 87.089 66.676 1.00 43.88 N
ATOM 18 C4 C B1234 6.767 86.210 66.800 1.00 44.13 C
ATOM 19 N4 C B1234 8.003 86.681 66.959 1.00 44.33 N
ATOM 20 C5 C B1234 6.543 84.804 66.764 1.00 44.28 C
ATOM 21 C6 C B1234 5.292 84.384 66.569 1.00 44.36 C
ATOM 22 P U B1235 3.476 82.497 61.895 1.00 52.46 P
ATOM 23 OP1 U B1235 2.666 81.965 60.774 1.00 53.84 O
ATOM 24 OP2 U B1235 4.637 81.716 62.389 1.00 53.28 O
ATOM 25 O5' U B1235 3.943 83.979 61.539 1.00 53.77 O
TER
ATOM 2 P A A1233 9.559 79.688 69.489 1.00 46.37 P
ATOM 3 OP1 A A1233 9.514 78.287 69.007 1.00 47.07 O
ATOM 4 OP2 A A1233 10.370 80.685 68.743 1.00 46.15 O
ATOM 5 O5' A A1233 8.074 80.250 69.628 1.00 43.67 O
ATOM 6 C5' A A1233 7.040 79.432 70.197 1.00 43.62 C
ATOM 7 C4' A A1233 5.702 80.132 70.123 1.00 44.49 C
ATOM 8 O4' A A1233 5.664 81.263 71.027 1.00 44.39 O
ATOM 9 C3' A A1233 5.335 80.743 68.787 1.00 44.75 C
ATOM 10 O3' A A1233 4.870 79.767 67.882 1.00 46.17 O
ATOM 11 C2' A A1233 4.249 81.732 69.178 1.00 44.42 C
ATOM 12 O2' A A1233 3.012 81.099 69.439 1.00 44.97 O
ATOM 13 C1' A A1233 4.818 82.273 70.490 1.00 44.40 C
ATOM 14 N9 A A1233 5.615 83.488 70.300 1.00 44.56 N
ATOM 15 C8 A A1233 6.971 83.590 70.126 1.00 44.85 C
ATOM 16 N7 A A1233 7.397 84.825 70.005 1.00 44.66 N
ATOM 17 C5 A A1233 6.244 85.586 70.100 1.00 43.07 C
ATOM 18 C6 A A1233 6.023 86.966 70.047 1.00 42.31 C
ATOM 19 N6 A A1233 6.995 87.863 69.889 1.00 40.14 N
ATOM 20 N1 A A1233 4.750 87.403 70.162 1.00 43.42 N
ATOM 21 C2 A A1233 3.776 86.500 70.320 1.00 44.30 C
ATOM 22 N3 A A1233 3.861 85.175 70.390 1.00 44.69 N
ATOM 23 C4 A A1233 5.138 84.777 70.272 1.00 43.61 C
ATOM 24 P C A1234 5.216 79.921 66.332 1.00 47.45 P
ATOM 25 OP1 C A1234 4.650 78.761 65.620 1.00 47.75 O
ATOM 26 OP2 C A1234 6.674 80.200 66.232 1.00 49.54 O
ATOM 27 O5' C A1234 4.405 81.225 65.909 1.00 45.69 O
TER
ATOM 1 O3' A B1233 4.870 79.767 67.882 1.00 46.17 O
ATOM 2 P C B1234 5.216 79.921 66.332 1.00 47.45 P
ATOM 3 OP1 C B1234 4.650 78.761 65.620 1.00 47.75 O
ATOM 4 OP2 C B1234 6.674 80.200 66.232 1.00 49.54 O
ATOM 5 O5' C B1234 4.405 81.225 65.909 1.00 45.69 O
ATOM 6 C5' C B1234 2.969 81.216 65.888 1.00 44.54 C
ATOM 7 C4' C B1234 2.435 82.584 65.560 1.00 45.09 C
ATOM 8 O4' C B1234 2.718 83.516 66.634 1.00 45.05 O
ATOM 9 C3' C B1234 3.054 83.239 64.348 1.00 45.75 C
ATOM 10 O3' C B1234 2.511 82.730 63.148 1.00 49.11 O
ATOM 11 C2' C B1234 2.721 84.705 64.574 1.00 45.53 C
ATOM 12 O2' C B1234 1.405 85.036 64.193 1.00 45.44 O
ATOM 13 C1' C B1234 2.903 84.817 66.091 1.00 45.21 C
ATOM 14 N1 C B1234 4.266 85.274 66.405 1.00 45.33 N
ATOM 15 C2 C B1234 4.503 86.648 66.492 1.00 45.13 C
ATOM 16 O2 C B1234 3.540 87.428 66.403 1.00 44.94 O
ATOM 17 N3 C B1234 5.769 87.089 66.676 1.00 43.88 N
ATOM 18 C4 C B1234 6.767 86.210 66.800 1.00 44.13 C
ATOM 19 N4 C B1234 8.003 86.681 66.959 1.00 44.33 N
ATOM 20 C5 C B1234 6.543 84.804 66.764 1.00 44.28 C
ATOM 21 C6 C B1234 5.292 84.384 66.569 1.00 44.36 C
ATOM 22 P U B1235 3.476 82.497 61.895 1.00 52.46 P
ATOM 23 OP1 U B1235 2.666 81.965 60.774 1.00 53.84 O
ATOM 24 OP2 U B1235 4.637 81.716 62.389 1.00 53.28 O
ATOM 25 O5' U B1235 3.943 83.979 61.539 1.00 53.77 O
TER
Atoms:
OP1: (9.514,78.287,69.007)
OP2: (10.370,80.685,68.743)
C3': (5.335,80.743,68.787)
C1': (4.818,82.273,70.490)
C5': (7.040,79.432,70.197)
O4': (5.664,81.263,71.027)
C8: (6.971,83.590,70.126)
O2': (3.012,81.099,69.439)
C6: (6.023,86.966,70.047)
C5: (6.244,85.586,70.100)
C4: (5.138,84.777,70.272)
P: (9.559,79.688,69.489)
C4': (5.702,80.132,70.123)
C2': (4.249,81.732,69.178)
C2: (3.776,86.500,70.320)
N1: (4.750,87.403,70.162)
N3: (3.861,85.175,70.390)
N6: (6.995,87.863,69.889)
N7: (7.397,84.825,70.005)
N9: (5.615,83.488,70.300)
O5': (8.074,80.250,69.628)
O3': (4.870,79.767,67.882)
OP2: (10.370,80.685,68.743)
C3': (5.335,80.743,68.787)
C1': (4.818,82.273,70.490)
C5': (7.040,79.432,70.197)
O4': (5.664,81.263,71.027)
C8: (6.971,83.590,70.126)
O2': (3.012,81.099,69.439)
C6: (6.023,86.966,70.047)
C5: (6.244,85.586,70.100)
C4: (5.138,84.777,70.272)
P: (9.559,79.688,69.489)
C4': (5.702,80.132,70.123)
C2': (4.249,81.732,69.178)
C2: (3.776,86.500,70.320)
N1: (4.750,87.403,70.162)
N3: (3.861,85.175,70.390)
N6: (6.995,87.863,69.889)
N7: (7.397,84.825,70.005)
N9: (5.615,83.488,70.300)
O5': (8.074,80.250,69.628)
O3': (4.870,79.767,67.882)
C2: (4.503,86.648,66.492)
OP1: (4.650,78.761,65.620)
OP2: (6.674,80.200,66.232)
C4: (6.767,86.210,66.800)
O5': (4.405,81.225,65.909)
C3': (3.054,83.239,64.348)
C1': (2.903,84.817,66.091)
O4': (2.718,83.516,66.634)
C5': (2.969,81.216,65.888)
P: (5.216,79.921,66.332)
O2: (3.540,87.428,66.403)
C4': (2.435,82.584,65.560)
C2': (2.721,84.705,64.574)
O2': (1.405,85.036,64.193)
N1: (4.266,85.274,66.405)
N3: (5.769,87.089,66.676)
N4: (8.003,86.681,66.959)
C6: (5.292,84.384,66.569)
C5: (6.543,84.804,66.764)
O3': (2.511,82.730,63.148)
OP1: (4.650,78.761,65.620)
OP2: (6.674,80.200,66.232)
C4: (6.767,86.210,66.800)
O5': (4.405,81.225,65.909)
C3': (3.054,83.239,64.348)
C1': (2.903,84.817,66.091)
O4': (2.718,83.516,66.634)
C5': (2.969,81.216,65.888)
P: (5.216,79.921,66.332)
O2: (3.540,87.428,66.403)
C4': (2.435,82.584,65.560)
C2': (2.721,84.705,64.574)
O2': (1.405,85.036,64.193)
N1: (4.266,85.274,66.405)
N3: (5.769,87.089,66.676)
N4: (8.003,86.681,66.959)
C6: (5.292,84.384,66.569)
C5: (6.543,84.804,66.764)
O3': (2.511,82.730,63.148)
Image (generated by PyMOL):