ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUM:R4:R5

Extra

PDB:
ATOM 1 O3' C A 3 -25.459 -7.508 13.783 1.00 58.96 O
ATOM 2 P A A 4 -24.221 -6.841 13.003 1.00 60.33 P
ATOM 3 OP1 A A 4 -24.197 -7.427 11.642 1.00 60.00 O
ATOM 4 OP2 A A 4 -23.002 -6.918 13.850 1.00 58.88 O
ATOM 5 O5' A A 4 -24.691 -5.309 12.907 1.00 57.44 O
ATOM 6 C5' A A 4 -23.833 -4.266 13.339 1.00 53.80 C
ATOM 7 C4' A A 4 -24.490 -3.411 14.403 1.00 50.64 C
ATOM 8 O4' A A 4 -24.770 -4.185 15.598 1.00 49.48 O
ATOM 9 C3' A A 4 -23.597 -2.301 14.911 1.00 48.91 C
ATOM 10 O3' A A 4 -23.633 -1.199 14.027 1.00 47.99 O
ATOM 11 C2' A A 4 -24.246 -1.985 16.251 1.00 48.01 C
ATOM 12 O2' A A 4 -25.403 -1.188 16.122 1.00 46.99 O
ATOM 13 C1' A A 4 -24.587 -3.385 16.756 1.00 47.53 C
ATOM 14 N9 A A 4 -23.524 -3.964 17.588 1.00 46.74 N
ATOM 15 C8 A A 4 -22.871 -5.149 17.381 1.00 46.08 C
ATOM 16 N7 A A 4 -21.951 -5.421 18.278 1.00 44.99 N
ATOM 17 C5 A A 4 -21.998 -4.341 19.145 1.00 44.79 C
ATOM 18 C6 A A 4 -21.268 -4.020 20.317 1.00 43.48 C
ATOM 19 N6 A A 4 -20.313 -4.801 20.828 1.00 43.62 N
ATOM 20 N1 A A 4 -21.553 -2.860 20.950 1.00 42.83 N
ATOM 21 C2 A A 4 -22.508 -2.071 20.437 1.00 45.43 C
ATOM 22 N3 A A 4 -23.261 -2.264 19.347 1.00 46.51 N
ATOM 23 C4 A A 4 -22.958 -3.430 18.735 1.00 46.08 C
ATOM 24 P C A 5 -22.294 -0.364 13.781 1.00 48.65 P
ATOM 25 OP1 C A 5 -22.625 0.754 12.868 1.00 51.27 O
ATOM 26 OP2 C A 5 -21.199 -1.307 13.455 1.00 46.65 O
ATOM 27 O5' C A 5 -21.972 0.254 15.210 1.00 45.58 O
TER

ATOM 1 O3' A B 4 -23.633 -1.199 14.027 1.00 47.99 O
ATOM 2 P C B 5 -22.294 -0.364 13.781 1.00 48.65 P
ATOM 3 OP1 C B 5 -22.625 0.754 12.868 1.00 51.27 O
ATOM 4 OP2 C B 5 -21.199 -1.307 13.455 1.00 46.65 O
ATOM 5 O5' C B 5 -21.972 0.254 15.210 1.00 45.58 O
ATOM 6 C5' C B 5 -22.768 1.292 15.747 1.00 42.34 C
ATOM 7 C4' C B 5 -22.121 1.709 17.039 1.00 39.47 C
ATOM 8 O4' C B 5 -22.047 0.544 17.892 1.00 37.22 O
ATOM 9 C3' C B 5 -20.674 2.114 16.856 1.00 39.39 C
ATOM 10 O3' C B 5 -20.605 3.485 16.494 1.00 42.33 O
ATOM 11 C2' C B 5 -20.079 1.826 18.228 1.00 37.50 C
ATOM 12 O2' C B 5 -20.306 2.876 19.145 1.00 37.51 O
ATOM 13 C1' C B 5 -20.854 0.583 18.650 1.00 35.01 C
ATOM 14 N1 C B 5 -20.100 -0.696 18.470 1.00 31.65 N
ATOM 15 C2 C B 5 -19.174 -1.100 19.457 1.00 32.14 C
ATOM 16 O2 C B 5 -18.992 -0.391 20.456 1.00 33.16 O
ATOM 17 N3 C B 5 -18.492 -2.266 19.291 1.00 29.86 N
ATOM 18 C4 C B 5 -18.711 -3.014 18.203 1.00 29.54 C
ATOM 19 N4 C B 5 -18.025 -4.151 18.088 1.00 29.98 N
ATOM 20 C5 C B 5 -19.646 -2.628 17.191 1.00 29.06 C
ATOM 21 C6 C B 5 -20.311 -1.474 17.364 1.00 29.45 C
ATOM 22 P G B 6 -19.262 4.075 15.845 1.00 44.75 P
ATOM 23 OP1 G B 6 -19.518 5.480 15.443 1.00 45.20 O
ATOM 24 OP2 G B 6 -18.740 3.100 14.861 1.00 44.83 O
ATOM 25 O5' G B 6 -18.257 4.069 17.080 1.00 44.24 O
TER

Atoms:
OP1: (-24.197,-7.427,11.642)
OP2: (-23.002,-6.918,13.850)
C3': (-23.597,-2.301,14.911)
C1': (-24.587,-3.385,16.756)
C5': (-23.833,-4.266,13.339)
O4': (-24.770,-4.185,15.598)
C8: (-22.871,-5.149,17.381)
O2': (-25.403,-1.188,16.122)
C6: (-21.268,-4.020,20.317)
C5: (-21.998,-4.341,19.145)
C4: (-22.958,-3.430,18.735)
P: (-24.221,-6.841,13.003)
C4': (-24.490,-3.411,14.403)
C2': (-24.246,-1.985,16.251)
C2: (-22.508,-2.071,20.437)
N1: (-21.553,-2.860,20.950)
N3: (-23.261,-2.264,19.347)
N6: (-20.313,-4.801,20.828)
N7: (-21.951,-5.421,18.278)
N9: (-23.524,-3.964,17.588)
O5': (-24.691,-5.309,12.907)
O3': (-23.633,-1.199,14.027)
C2: (-19.174,-1.100,19.457)
OP1: (-22.625,0.754,12.868)
OP2: (-21.199,-1.307,13.455)
C4: (-18.711,-3.014,18.203)
O5': (-21.972,0.254,15.210)
C3': (-20.674,2.114,16.856)
C1': (-20.854,0.583,18.650)
O4': (-22.047,0.544,17.892)
C5': (-22.768,1.292,15.747)
P: (-22.294,-0.364,13.781)
O2: (-18.992,-0.391,20.456)
C4': (-22.121,1.709,17.039)
C2': (-20.079,1.826,18.228)
O2': (-20.306,2.876,19.145)
N1: (-20.100,-0.696,18.470)
N3: (-18.492,-2.266,19.291)
N4: (-18.025,-4.151,18.088)
C6: (-20.311,-1.474,17.364)
C5: (-19.646,-2.628,17.191)
O3': (-20.605,3.485,16.494)
Image (generated by PyMOL):
PyMOL image
show in jmol