ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A589:A590

Extra

PDB:
ATOM 1 O3' G A 588 -13.296 43.685 84.588 1.00 45.60 O
ATOM 2 P A A 589 -13.733 43.432 83.068 1.00 22.79 P
ATOM 3 OP1 A A 589 -15.225 43.465 83.036 1.00 30.05 O
ATOM 4 OP2 A A 589 -13.012 42.221 82.601 1.00 31.14 O
ATOM 5 O5' A A 589 -13.136 44.681 82.284 1.00 25.46 O
ATOM 6 C5' A A 589 -13.761 45.974 82.382 1.00 24.94 C
ATOM 7 C4' A A 589 -13.209 46.903 81.331 1.00 25.51 C
ATOM 8 O4' A A 589 -11.834 47.233 81.647 1.00 25.44 O
ATOM 9 C3' A A 589 -13.167 46.287 79.950 1.00 26.40 C
ATOM 10 O3' A A 589 -14.415 46.460 79.299 1.00 26.95 O
ATOM 11 C2' A A 589 -11.999 47.008 79.292 1.00 26.31 C
ATOM 12 O2' A A 589 -12.355 48.281 78.793 1.00 26.17 O
ATOM 13 C1' A A 589 -11.047 47.186 80.477 1.00 25.80 C
ATOM 14 N9 A A 589 -10.143 46.055 80.639 1.00 36.64 N
ATOM 15 C8 A A 589 -10.314 44.983 81.484 1.00 36.42 C
ATOM 16 N7 A A 589 -9.341 44.112 81.431 1.00 37.29 N
ATOM 17 C5 A A 589 -8.476 44.640 80.488 1.00 38.91 C
ATOM 18 C6 A A 589 -7.268 44.185 79.980 1.00 41.60 C
ATOM 19 N6 A A 589 -6.696 43.045 80.367 1.00 44.01 N
ATOM 20 N1 A A 589 -6.654 44.941 79.048 1.00 41.69 N
ATOM 21 C2 A A 589 -7.239 46.080 78.663 1.00 40.34 C
ATOM 22 N3 A A 589 -8.383 46.614 79.067 1.00 39.57 N
ATOM 23 C4 A A 589 -8.958 45.835 79.992 1.00 37.68 C
ATOM 24 P C A 590 -15.100 45.207 78.568 1.00 80.63 P
ATOM 25 OP1 C A 590 -16.495 45.578 78.205 1.00107.82 O
ATOM 26 OP2 C A 590 -14.853 43.997 79.393 1.00107.37 O
ATOM 27 O5' C A 590 -14.253 45.085 77.232 1.00 14.54 O
TER

ATOM 1 O3' A B 589 -14.415 46.460 79.299 1.00 26.95 O
ATOM 2 P C B 590 -15.100 45.207 78.568 1.00 80.63 P
ATOM 3 OP1 C B 590 -16.495 45.578 78.205 1.00107.82 O
ATOM 4 OP2 C B 590 -14.853 43.997 79.393 1.00107.37 O
ATOM 5 O5' C B 590 -14.253 45.085 77.232 1.00 14.54 O
ATOM 6 C5' C B 590 -14.256 46.157 76.305 1.00 16.01 C
ATOM 7 C4' C B 590 -13.315 45.875 75.179 1.00 17.78 C
ATOM 8 O4' C B 590 -11.953 45.921 75.659 1.00 18.83 O
ATOM 9 C3' C B 590 -13.418 44.518 74.512 1.00 18.09 C
ATOM 10 O3' C B 590 -14.478 44.443 73.564 1.00 18.71 O
ATOM 11 C2' C B 590 -12.059 44.405 73.831 1.00 18.32 C
ATOM 12 O2' C B 590 -12.021 45.112 72.610 1.00 17.95 O
ATOM 13 C1' C B 590 -11.141 45.110 74.831 1.00 19.16 C
ATOM 14 N1 C B 590 -10.380 44.161 75.660 1.00 85.46 N
ATOM 15 C2 C B 590 -9.171 43.653 75.162 1.00 86.50 C
ATOM 16 O2 C B 590 -8.765 44.035 74.052 1.00 87.60 O
ATOM 17 N3 C B 590 -8.477 42.761 75.900 1.00 87.31 N
ATOM 18 C4 C B 590 -8.943 42.373 77.090 1.00 88.13 C
ATOM 19 N4 C B 590 -8.232 41.480 77.779 1.00 89.01 N
ATOM 20 C5 C B 590 -10.163 42.882 77.625 1.00 88.66 C
ATOM 21 C6 C B 590 -10.841 43.766 76.885 1.00 86.95 C
ATOM 22 P C B 591 -15.029 43.001 73.102 1.00 42.53 P
ATOM 23 OP1 C B 591 -16.045 43.218 72.036 1.00 66.91 O
ATOM 24 OP2 C B 591 -15.398 42.257 74.331 1.00 64.89 O
ATOM 25 O5' C B 591 -13.765 42.282 72.453 1.00 35.27 O
TER

Atoms:
OP1: (-15.225,43.465,83.036)
OP2: (-13.012,42.221,82.601)
C3': (-13.167,46.287,79.950)
C1': (-11.047,47.186,80.477)
C5': (-13.761,45.974,82.382)
O4': (-11.834,47.233,81.647)
C8: (-10.314,44.983,81.484)
O2': (-12.355,48.281,78.793)
C6: (-7.268,44.185,79.980)
C5: (-8.476,44.640,80.488)
C4: (-8.958,45.835,79.992)
P: (-13.733,43.432,83.068)
C4': (-13.209,46.903,81.331)
C2': (-11.999,47.008,79.292)
C2: (-7.239,46.080,78.663)
N1: (-6.654,44.941,79.048)
N3: (-8.383,46.614,79.067)
N6: (-6.696,43.045,80.367)
N7: (-9.341,44.112,81.431)
N9: (-10.143,46.055,80.639)
O5': (-13.136,44.681,82.284)
O3': (-14.415,46.460,79.299)
C2: (-9.171,43.653,75.162)
OP1: (-16.495,45.578,78.205)
OP2: (-14.853,43.997,79.393)
C4: (-8.943,42.373,77.090)
O5': (-14.253,45.085,77.232)
C3': (-13.418,44.518,74.512)
C1': (-11.141,45.110,74.831)
O4': (-11.953,45.921,75.659)
C5': (-14.256,46.157,76.305)
P: (-15.100,45.207,78.568)
O2: (-8.765,44.035,74.052)
C4': (-13.315,45.875,75.179)
C2': (-12.059,44.405,73.831)
O2': (-12.021,45.112,72.610)
N1: (-10.380,44.161,75.660)
N3: (-8.477,42.761,75.900)
N4: (-8.232,41.480,77.779)
C6: (-10.841,43.766,76.885)
C5: (-10.163,42.882,77.625)
O3': (-14.478,44.443,73.564)
Image (generated by PyMOL):
PyMOL image
show in jmol