ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PN4:C7:C8

Extra

PDB:
ATOM 1 O3' A A 6 -26.998 -8.804 22.587 1.00 47.27 O
ATOM 2 P A A 7 -28.415 -8.653 21.863 1.00 49.17 P
ATOM 3 OP1 A A 7 -28.438 -7.256 21.350 1.00 49.07 O
ATOM 4 OP2 A A 7 -29.486 -9.132 22.771 1.00 47.02 O
ATOM 5 O5' A A 7 -28.279 -9.682 20.635 1.00 49.06 O
ATOM 6 C5' A A 7 -27.627 -9.326 19.418 1.00 48.27 C
ATOM 7 C4' A A 7 -27.363 -10.593 18.589 1.00 49.17 C
ATOM 8 O4' A A 7 -26.775 -11.670 19.361 1.00 47.56 O
ATOM 9 C3' A A 7 -28.598 -11.284 18.060 1.00 49.60 C
ATOM 10 O3' A A 7 -29.049 -10.550 16.973 1.00 51.93 O
ATOM 11 C2' A A 7 -27.990 -12.623 17.654 1.00 50.24 C
ATOM 12 O2' A A 7 -27.050 -12.517 16.584 1.00 53.81 O
ATOM 13 C1' A A 7 -27.281 -12.927 18.948 1.00 45.55 C
ATOM 14 N9 A A 7 -28.103 -13.494 20.025 1.00 43.46 N
ATOM 15 C8 A A 7 -28.590 -12.840 21.120 1.00 41.16 C
ATOM 16 N7 A A 7 -29.270 -13.606 21.935 1.00 42.76 N
ATOM 17 C5 A A 7 -29.252 -14.857 21.320 1.00 43.94 C
ATOM 18 C6 A A 7 -29.799 -16.118 21.661 1.00 43.19 C
ATOM 19 N6 A A 7 -30.508 -16.364 22.757 1.00 42.75 N
ATOM 20 N1 A A 7 -29.599 -17.152 20.824 1.00 44.19 N
ATOM 21 C2 A A 7 -28.891 -16.934 19.703 1.00 45.07 C
ATOM 22 N3 A A 7 -28.317 -15.803 19.288 1.00 44.16 N
ATOM 23 C4 A A 7 -28.533 -14.796 20.142 1.00 42.90 C
ATOM 24 P C A 8 -30.587 -10.284 16.711 1.00 50.94 P
ATOM 25 OP1 C A 8 -30.644 -9.189 15.754 1.00 51.62 O
ATOM 26 OP2 C A 8 -31.367 -10.156 17.953 1.00 53.69 O
ATOM 27 O5' C A 8 -30.967 -11.690 16.070 1.00 52.03 O
TER

ATOM 1 O3' A B 7 -29.049 -10.550 16.973 1.00 51.93 O
ATOM 2 P C B 8 -30.587 -10.284 16.711 1.00 50.94 P
ATOM 3 OP1 C B 8 -30.644 -9.189 15.754 1.00 51.62 O
ATOM 4 OP2 C B 8 -31.367 -10.156 17.953 1.00 53.69 O
ATOM 5 O5' C B 8 -30.967 -11.690 16.070 1.00 52.03 O
ATOM 6 C5' C B 8 -30.086 -12.376 15.171 1.00 51.78 C
ATOM 7 C4' C B 8 -30.502 -13.825 15.002 1.00 51.62 C
ATOM 8 O4' C B 8 -30.072 -14.567 16.170 1.00 50.61 O
ATOM 9 C3' C B 8 -31.999 -14.076 14.949 1.00 52.49 C
ATOM 10 O3' C B 8 -32.402 -13.923 13.641 1.00 55.22 O
ATOM 11 C2' C B 8 -32.107 -15.525 15.425 1.00 51.75 C
ATOM 12 O2' C B 8 -31.693 -16.515 14.486 1.00 52.66 O
ATOM 13 C1' C B 8 -31.096 -15.472 16.563 1.00 48.40 C
ATOM 14 N1 C B 8 -31.669 -15.102 17.920 1.00 46.12 N
ATOM 15 C2 C B 8 -32.161 -16.154 18.689 1.00 43.82 C
ATOM 16 O2 C B 8 -32.121 -17.259 18.211 1.00 43.29 O
ATOM 17 N3 C B 8 -32.711 -15.942 19.908 1.00 44.36 N
ATOM 18 C4 C B 8 -32.756 -14.699 20.372 1.00 43.02 C
ATOM 19 N4 C B 8 -33.265 -14.572 21.595 1.00 43.43 N
ATOM 20 C5 C B 8 -32.252 -13.581 19.619 1.00 42.77 C
ATOM 21 C6 C B 8 -31.723 -13.817 18.408 1.00 42.43 C
ATOM 22 P U B 9 -33.827 -13.340 13.207 1.00 54.28 P
ATOM 23 OP1 U B 9 -33.585 -12.617 11.932 1.00 55.06 O
ATOM 24 OP2 U B 9 -34.484 -12.679 14.346 1.00 56.21 O
ATOM 25 O5' U B 9 -34.579 -14.693 12.824 1.00 56.30 O
TER

Atoms:
OP1: (-28.438,-7.256,21.350)
OP2: (-29.486,-9.132,22.771)
C3': (-28.598,-11.284,18.060)
C1': (-27.281,-12.927,18.948)
C5': (-27.627,-9.326,19.418)
O4': (-26.775,-11.670,19.361)
C8: (-28.590,-12.840,21.120)
O2': (-27.050,-12.517,16.584)
C6: (-29.799,-16.118,21.661)
C5: (-29.252,-14.857,21.320)
C4: (-28.533,-14.796,20.142)
P: (-28.415,-8.653,21.863)
C4': (-27.363,-10.593,18.589)
C2': (-27.990,-12.623,17.654)
C2: (-28.891,-16.934,19.703)
N1: (-29.599,-17.152,20.824)
N3: (-28.317,-15.803,19.288)
N6: (-30.508,-16.364,22.757)
N7: (-29.270,-13.606,21.935)
N9: (-28.103,-13.494,20.025)
O5': (-28.279,-9.682,20.635)
O3': (-29.049,-10.550,16.973)
C2: (-32.161,-16.154,18.689)
OP1: (-30.644,-9.189,15.754)
OP2: (-31.367,-10.156,17.953)
C4: (-32.756,-14.699,20.372)
O5': (-30.967,-11.690,16.070)
C3': (-31.999,-14.076,14.949)
C1': (-31.096,-15.472,16.563)
O4': (-30.072,-14.567,16.170)
C5': (-30.086,-12.376,15.171)
P: (-30.587,-10.284,16.711)
O2: (-32.121,-17.259,18.211)
C4': (-30.502,-13.825,15.002)
C2': (-32.107,-15.525,15.425)
O2': (-31.693,-16.515,14.486)
N1: (-31.669,-15.102,17.920)
N3: (-32.711,-15.942,19.908)
N4: (-33.265,-14.572,21.595)
C6: (-31.723,-13.817,18.408)
C5: (-32.252,-13.581,19.619)
O3': (-32.402,-13.923,13.641)
Image (generated by PyMOL):
PyMOL image
show in jmol