Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A2:A3
Extra
PDB:
ATOM 1 O3' G A 1 8.755 -3.791 18.247 1.00 63.59 O
ATOM 2 P A A 2 9.432 -3.576 16.806 1.00 62.32 P
ATOM 3 OP1 A A 2 10.784 -4.190 16.817 1.00 62.32 O
ATOM 4 OP2 A A 2 9.281 -2.139 16.462 1.00 62.20 O
ATOM 5 O5' A A 2 8.510 -4.417 15.815 1.00 60.73 O
ATOM 6 C5' A A 2 8.439 -5.836 15.913 1.00 58.33 C
ATOM 7 C4' A A 2 7.649 -6.399 14.757 1.00 56.44 C
ATOM 8 O4' A A 2 6.246 -6.060 14.922 1.00 55.71 O
ATOM 9 C3' A A 2 8.016 -5.838 13.394 1.00 55.50 C
ATOM 10 O3' A A 2 9.106 -6.570 12.850 1.00 54.47 O
ATOM 11 C2' A A 2 6.739 -6.068 12.596 1.00 55.26 C
ATOM 12 O2' A A 2 6.628 -7.386 12.094 1.00 55.10 O
ATOM 13 C1' A A 2 5.665 -5.807 13.654 1.00 55.02 C
ATOM 14 N9 A A 2 5.167 -4.433 13.647 1.00 54.39 N
ATOM 15 C8 A A 2 5.629 -3.360 14.369 1.00 54.14 C
ATOM 16 N7 A A 2 4.972 -2.248 14.142 1.00 53.96 N
ATOM 17 C5 A A 2 4.013 -2.613 13.207 1.00 53.93 C
ATOM 18 C6 A A 2 2.999 -1.887 12.557 1.00 53.64 C
ATOM 19 N6 A A 2 2.773 -0.586 12.755 1.00 53.49 N
ATOM 20 N1 A A 2 2.214 -2.552 11.682 1.00 53.73 N
ATOM 21 C2 A A 2 2.440 -3.856 11.481 1.00 53.72 C
ATOM 22 N3 A A 2 3.358 -4.647 12.031 1.00 53.87 N
ATOM 23 C4 A A 2 4.121 -3.956 12.895 1.00 54.10 C
ATOM 24 P C A 3 10.076 -5.873 11.777 1.00 53.82 P
ATOM 25 OP1 C A 3 11.341 -6.648 11.707 1.00 53.76 O
ATOM 26 OP2 C A 3 10.118 -4.420 12.088 1.00 53.59 O
ATOM 27 O5' C A 3 9.303 -6.049 10.398 1.00 52.62 O
TER
ATOM 1 O3' A B 2 9.106 -6.570 12.850 1.00 54.47 O
ATOM 2 P C B 3 10.076 -5.873 11.777 1.00 53.82 P
ATOM 3 OP1 C B 3 11.341 -6.648 11.707 1.00 53.76 O
ATOM 4 OP2 C B 3 10.118 -4.420 12.088 1.00 53.59 O
ATOM 5 O5' C B 3 9.303 -6.049 10.398 1.00 52.62 O
ATOM 6 C5' C B 3 9.059 -4.930 9.562 1.00 50.88 C
ATOM 7 C4' C B 3 7.752 -5.101 8.833 1.00 49.64 C
ATOM 8 O4' C B 3 6.652 -4.818 9.736 1.00 49.12 O
ATOM 9 C3' C B 3 7.542 -4.156 7.666 1.00 48.64 C
ATOM 10 O3' C B 3 8.151 -4.693 6.501 1.00 47.44 O
ATOM 11 C2' C B 3 6.024 -4.120 7.558 1.00 48.56 C
ATOM 12 O2' C B 3 5.495 -5.238 6.876 1.00 48.84 O
ATOM 13 C1' C B 3 5.616 -4.154 9.032 1.00 48.49 C
ATOM 14 N1 C B 3 5.477 -2.806 9.602 1.00 47.88 N
ATOM 15 C2 C B 3 4.425 -1.997 9.171 1.00 47.58 C
ATOM 16 O2 C B 3 3.634 -2.443 8.327 1.00 48.18 O
ATOM 17 N3 C B 3 4.295 -0.752 9.684 1.00 47.35 N
ATOM 18 C4 C B 3 5.167 -0.309 10.589 1.00 47.05 C
ATOM 19 N4 C B 3 5.000 0.928 11.063 1.00 46.57 N
ATOM 20 C5 C B 3 6.249 -1.114 11.049 1.00 47.33 C
ATOM 21 C6 C B 3 6.365 -2.344 10.534 1.00 47.65 C
ATOM 22 P A B 4 9.036 -3.740 5.561 1.00 46.38 P
ATOM 23 OP1 A B 4 9.782 -4.593 4.601 1.00 46.78 O
ATOM 24 OP2 A B 4 9.777 -2.802 6.441 1.00 46.09 O
ATOM 25 O5' A B 4 7.945 -2.912 4.751 1.00 45.07 O
TER
ATOM 2 P A A 2 9.432 -3.576 16.806 1.00 62.32 P
ATOM 3 OP1 A A 2 10.784 -4.190 16.817 1.00 62.32 O
ATOM 4 OP2 A A 2 9.281 -2.139 16.462 1.00 62.20 O
ATOM 5 O5' A A 2 8.510 -4.417 15.815 1.00 60.73 O
ATOM 6 C5' A A 2 8.439 -5.836 15.913 1.00 58.33 C
ATOM 7 C4' A A 2 7.649 -6.399 14.757 1.00 56.44 C
ATOM 8 O4' A A 2 6.246 -6.060 14.922 1.00 55.71 O
ATOM 9 C3' A A 2 8.016 -5.838 13.394 1.00 55.50 C
ATOM 10 O3' A A 2 9.106 -6.570 12.850 1.00 54.47 O
ATOM 11 C2' A A 2 6.739 -6.068 12.596 1.00 55.26 C
ATOM 12 O2' A A 2 6.628 -7.386 12.094 1.00 55.10 O
ATOM 13 C1' A A 2 5.665 -5.807 13.654 1.00 55.02 C
ATOM 14 N9 A A 2 5.167 -4.433 13.647 1.00 54.39 N
ATOM 15 C8 A A 2 5.629 -3.360 14.369 1.00 54.14 C
ATOM 16 N7 A A 2 4.972 -2.248 14.142 1.00 53.96 N
ATOM 17 C5 A A 2 4.013 -2.613 13.207 1.00 53.93 C
ATOM 18 C6 A A 2 2.999 -1.887 12.557 1.00 53.64 C
ATOM 19 N6 A A 2 2.773 -0.586 12.755 1.00 53.49 N
ATOM 20 N1 A A 2 2.214 -2.552 11.682 1.00 53.73 N
ATOM 21 C2 A A 2 2.440 -3.856 11.481 1.00 53.72 C
ATOM 22 N3 A A 2 3.358 -4.647 12.031 1.00 53.87 N
ATOM 23 C4 A A 2 4.121 -3.956 12.895 1.00 54.10 C
ATOM 24 P C A 3 10.076 -5.873 11.777 1.00 53.82 P
ATOM 25 OP1 C A 3 11.341 -6.648 11.707 1.00 53.76 O
ATOM 26 OP2 C A 3 10.118 -4.420 12.088 1.00 53.59 O
ATOM 27 O5' C A 3 9.303 -6.049 10.398 1.00 52.62 O
TER
ATOM 1 O3' A B 2 9.106 -6.570 12.850 1.00 54.47 O
ATOM 2 P C B 3 10.076 -5.873 11.777 1.00 53.82 P
ATOM 3 OP1 C B 3 11.341 -6.648 11.707 1.00 53.76 O
ATOM 4 OP2 C B 3 10.118 -4.420 12.088 1.00 53.59 O
ATOM 5 O5' C B 3 9.303 -6.049 10.398 1.00 52.62 O
ATOM 6 C5' C B 3 9.059 -4.930 9.562 1.00 50.88 C
ATOM 7 C4' C B 3 7.752 -5.101 8.833 1.00 49.64 C
ATOM 8 O4' C B 3 6.652 -4.818 9.736 1.00 49.12 O
ATOM 9 C3' C B 3 7.542 -4.156 7.666 1.00 48.64 C
ATOM 10 O3' C B 3 8.151 -4.693 6.501 1.00 47.44 O
ATOM 11 C2' C B 3 6.024 -4.120 7.558 1.00 48.56 C
ATOM 12 O2' C B 3 5.495 -5.238 6.876 1.00 48.84 O
ATOM 13 C1' C B 3 5.616 -4.154 9.032 1.00 48.49 C
ATOM 14 N1 C B 3 5.477 -2.806 9.602 1.00 47.88 N
ATOM 15 C2 C B 3 4.425 -1.997 9.171 1.00 47.58 C
ATOM 16 O2 C B 3 3.634 -2.443 8.327 1.00 48.18 O
ATOM 17 N3 C B 3 4.295 -0.752 9.684 1.00 47.35 N
ATOM 18 C4 C B 3 5.167 -0.309 10.589 1.00 47.05 C
ATOM 19 N4 C B 3 5.000 0.928 11.063 1.00 46.57 N
ATOM 20 C5 C B 3 6.249 -1.114 11.049 1.00 47.33 C
ATOM 21 C6 C B 3 6.365 -2.344 10.534 1.00 47.65 C
ATOM 22 P A B 4 9.036 -3.740 5.561 1.00 46.38 P
ATOM 23 OP1 A B 4 9.782 -4.593 4.601 1.00 46.78 O
ATOM 24 OP2 A B 4 9.777 -2.802 6.441 1.00 46.09 O
ATOM 25 O5' A B 4 7.945 -2.912 4.751 1.00 45.07 O
TER
Atoms:
OP1: (10.784,-4.190,16.817)
OP2: (9.281,-2.139,16.462)
C3': (8.016,-5.838,13.394)
C1': (5.665,-5.807,13.654)
C5': (8.439,-5.836,15.913)
O4': (6.246,-6.060,14.922)
C8: (5.629,-3.360,14.369)
O2': (6.628,-7.386,12.094)
C6: (2.999,-1.887,12.557)
C5: (4.013,-2.613,13.207)
C4: (4.121,-3.956,12.895)
P: (9.432,-3.576,16.806)
C4': (7.649,-6.399,14.757)
C2': (6.739,-6.068,12.596)
C2: (2.440,-3.856,11.481)
N1: (2.214,-2.552,11.682)
N3: (3.358,-4.647,12.031)
N6: (2.773,-0.586,12.755)
N7: (4.972,-2.248,14.142)
N9: (5.167,-4.433,13.647)
O5': (8.510,-4.417,15.815)
O3': (9.106,-6.570,12.850)
OP2: (9.281,-2.139,16.462)
C3': (8.016,-5.838,13.394)
C1': (5.665,-5.807,13.654)
C5': (8.439,-5.836,15.913)
O4': (6.246,-6.060,14.922)
C8: (5.629,-3.360,14.369)
O2': (6.628,-7.386,12.094)
C6: (2.999,-1.887,12.557)
C5: (4.013,-2.613,13.207)
C4: (4.121,-3.956,12.895)
P: (9.432,-3.576,16.806)
C4': (7.649,-6.399,14.757)
C2': (6.739,-6.068,12.596)
C2: (2.440,-3.856,11.481)
N1: (2.214,-2.552,11.682)
N3: (3.358,-4.647,12.031)
N6: (2.773,-0.586,12.755)
N7: (4.972,-2.248,14.142)
N9: (5.167,-4.433,13.647)
O5': (8.510,-4.417,15.815)
O3': (9.106,-6.570,12.850)
C2: (4.425,-1.997,9.171)
OP1: (11.341,-6.648,11.707)
OP2: (10.118,-4.420,12.088)
C4: (5.167,-0.309,10.589)
O5': (9.303,-6.049,10.398)
C3': (7.542,-4.156,7.666)
C1': (5.616,-4.154,9.032)
O4': (6.652,-4.818,9.736)
C5': (9.059,-4.930,9.562)
P: (10.076,-5.873,11.777)
O2: (3.634,-2.443,8.327)
C4': (7.752,-5.101,8.833)
C2': (6.024,-4.120,7.558)
O2': (5.495,-5.238,6.876)
N1: (5.477,-2.806,9.602)
N3: (4.295,-0.752,9.684)
N4: (5.000,0.928,11.063)
C6: (6.365,-2.344,10.534)
C5: (6.249,-1.114,11.049)
O3': (8.151,-4.693,6.501)
OP1: (11.341,-6.648,11.707)
OP2: (10.118,-4.420,12.088)
C4: (5.167,-0.309,10.589)
O5': (9.303,-6.049,10.398)
C3': (7.542,-4.156,7.666)
C1': (5.616,-4.154,9.032)
O4': (6.652,-4.818,9.736)
C5': (9.059,-4.930,9.562)
P: (10.076,-5.873,11.777)
O2: (3.634,-2.443,8.327)
C4': (7.752,-5.101,8.833)
C2': (6.024,-4.120,7.558)
O2': (5.495,-5.238,6.876)
N1: (5.477,-2.806,9.602)
N3: (4.295,-0.752,9.684)
N4: (5.000,0.928,11.063)
C6: (6.365,-2.344,10.534)
C5: (6.249,-1.114,11.049)
O3': (8.151,-4.693,6.501)
Image (generated by PyMOL):