Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01230:01231
Extra
PDB:
ATOM 1 O3' U A1229 19.596 93.171 74.571 1.00 38.14 O
ATOM 2 P A A1230 18.936 92.204 73.468 1.00 39.66 P
ATOM 3 OP1 A A1230 19.883 92.058 72.339 1.00 39.93 O
ATOM 4 OP2 A A1230 17.560 92.710 73.213 1.00 38.36 O
ATOM 5 O5' A A1230 18.842 90.790 74.197 1.00 39.15 O
ATOM 6 C5' A A1230 20.031 90.124 74.654 1.00 38.98 C
ATOM 7 C4' A A1230 19.678 88.870 75.413 1.00 39.55 C
ATOM 8 O4' A A1230 19.001 89.213 76.651 1.00 39.72 O
ATOM 9 C3' A A1230 18.705 87.939 74.718 1.00 41.79 C
ATOM 10 O3' A A1230 19.323 87.126 73.734 1.00 41.95 O
ATOM 11 C2' A A1230 18.144 87.144 75.887 1.00 41.17 C
ATOM 12 O2' A A1230 19.052 86.178 76.370 1.00 42.56 O
ATOM 13 C1' A A1230 18.010 88.239 76.940 1.00 38.56 C
ATOM 14 N9 A A1230 16.703 88.895 76.911 1.00 39.16 N
ATOM 15 C8 A A1230 16.367 90.065 76.280 1.00 39.43 C
ATOM 16 N7 A A1230 15.133 90.446 76.494 1.00 40.31 N
ATOM 17 C5 A A1230 14.611 89.450 77.306 1.00 39.72 C
ATOM 18 C6 A A1230 13.345 89.276 77.901 1.00 39.99 C
ATOM 19 N6 A A1230 12.341 90.146 77.782 1.00 36.48 N
ATOM 20 N1 A A1230 13.150 88.167 78.642 1.00 41.77 N
ATOM 21 C2 A A1230 14.166 87.302 78.782 1.00 40.88 C
ATOM 22 N3 A A1230 15.398 87.361 78.288 1.00 39.28 N
ATOM 23 C4 A A1230 15.560 88.474 77.551 1.00 40.01 C
ATOM 24 P C A1231 18.497 86.730 72.416 1.00 47.47 P
ATOM 25 OP1 C A1231 19.436 86.083 71.456 1.00 45.44 O
ATOM 26 OP2 C A1231 17.711 87.928 71.994 1.00 46.43 O
ATOM 27 O5' C A1231 17.451 85.641 72.923 1.00 48.43 O
TER
ATOM 1 O3' A B1230 19.323 87.126 73.734 1.00 41.95 O
ATOM 2 P C B1231 18.497 86.730 72.416 1.00 47.47 P
ATOM 3 OP1 C B1231 19.436 86.083 71.456 1.00 45.44 O
ATOM 4 OP2 C B1231 17.711 87.928 71.994 1.00 46.43 O
ATOM 5 O5' C B1231 17.451 85.641 72.923 1.00 48.43 O
ATOM 6 C5' C B1231 17.897 84.410 73.520 1.00 48.94 C
ATOM 7 C4' C B1231 16.762 83.739 74.257 1.00 48.92 C
ATOM 8 O4' C B1231 16.308 84.596 75.340 1.00 47.41 O
ATOM 9 C3' C B1231 15.485 83.480 73.471 1.00 48.50 C
ATOM 10 O3' C B1231 15.555 82.356 72.607 1.00 49.56 O
ATOM 11 C2' C B1231 14.479 83.283 74.591 1.00 47.37 C
ATOM 12 O2' C B1231 14.616 82.026 75.225 1.00 47.64 O
ATOM 13 C1' C B1231 14.918 84.379 75.560 1.00 48.15 C
ATOM 14 N1 C B1231 14.181 85.634 75.311 1.00 48.60 N
ATOM 15 C2 C B1231 12.935 85.812 75.928 1.00 47.83 C
ATOM 16 O2 C B1231 12.500 84.917 76.667 1.00 49.28 O
ATOM 17 N3 C B1231 12.238 86.948 75.700 1.00 46.16 N
ATOM 18 C4 C B1231 12.736 87.882 74.890 1.00 45.92 C
ATOM 19 N4 C B1231 12.012 88.979 74.686 1.00 46.09 N
ATOM 20 C5 C B1231 13.999 87.731 74.250 1.00 46.42 C
ATOM 21 C6 C B1231 14.684 86.605 74.488 1.00 48.25 C
ATOM 22 P C B1232 14.620 82.310 71.300 1.00 51.34 P
ATOM 23 OP1 C B1232 15.098 81.210 70.436 1.00 51.29 O
ATOM 24 OP2 C B1232 14.527 83.688 70.748 1.00 52.62 O
ATOM 25 O5' C B1232 13.178 81.934 71.860 1.00 50.72 O
TER
ATOM 2 P A A1230 18.936 92.204 73.468 1.00 39.66 P
ATOM 3 OP1 A A1230 19.883 92.058 72.339 1.00 39.93 O
ATOM 4 OP2 A A1230 17.560 92.710 73.213 1.00 38.36 O
ATOM 5 O5' A A1230 18.842 90.790 74.197 1.00 39.15 O
ATOM 6 C5' A A1230 20.031 90.124 74.654 1.00 38.98 C
ATOM 7 C4' A A1230 19.678 88.870 75.413 1.00 39.55 C
ATOM 8 O4' A A1230 19.001 89.213 76.651 1.00 39.72 O
ATOM 9 C3' A A1230 18.705 87.939 74.718 1.00 41.79 C
ATOM 10 O3' A A1230 19.323 87.126 73.734 1.00 41.95 O
ATOM 11 C2' A A1230 18.144 87.144 75.887 1.00 41.17 C
ATOM 12 O2' A A1230 19.052 86.178 76.370 1.00 42.56 O
ATOM 13 C1' A A1230 18.010 88.239 76.940 1.00 38.56 C
ATOM 14 N9 A A1230 16.703 88.895 76.911 1.00 39.16 N
ATOM 15 C8 A A1230 16.367 90.065 76.280 1.00 39.43 C
ATOM 16 N7 A A1230 15.133 90.446 76.494 1.00 40.31 N
ATOM 17 C5 A A1230 14.611 89.450 77.306 1.00 39.72 C
ATOM 18 C6 A A1230 13.345 89.276 77.901 1.00 39.99 C
ATOM 19 N6 A A1230 12.341 90.146 77.782 1.00 36.48 N
ATOM 20 N1 A A1230 13.150 88.167 78.642 1.00 41.77 N
ATOM 21 C2 A A1230 14.166 87.302 78.782 1.00 40.88 C
ATOM 22 N3 A A1230 15.398 87.361 78.288 1.00 39.28 N
ATOM 23 C4 A A1230 15.560 88.474 77.551 1.00 40.01 C
ATOM 24 P C A1231 18.497 86.730 72.416 1.00 47.47 P
ATOM 25 OP1 C A1231 19.436 86.083 71.456 1.00 45.44 O
ATOM 26 OP2 C A1231 17.711 87.928 71.994 1.00 46.43 O
ATOM 27 O5' C A1231 17.451 85.641 72.923 1.00 48.43 O
TER
ATOM 1 O3' A B1230 19.323 87.126 73.734 1.00 41.95 O
ATOM 2 P C B1231 18.497 86.730 72.416 1.00 47.47 P
ATOM 3 OP1 C B1231 19.436 86.083 71.456 1.00 45.44 O
ATOM 4 OP2 C B1231 17.711 87.928 71.994 1.00 46.43 O
ATOM 5 O5' C B1231 17.451 85.641 72.923 1.00 48.43 O
ATOM 6 C5' C B1231 17.897 84.410 73.520 1.00 48.94 C
ATOM 7 C4' C B1231 16.762 83.739 74.257 1.00 48.92 C
ATOM 8 O4' C B1231 16.308 84.596 75.340 1.00 47.41 O
ATOM 9 C3' C B1231 15.485 83.480 73.471 1.00 48.50 C
ATOM 10 O3' C B1231 15.555 82.356 72.607 1.00 49.56 O
ATOM 11 C2' C B1231 14.479 83.283 74.591 1.00 47.37 C
ATOM 12 O2' C B1231 14.616 82.026 75.225 1.00 47.64 O
ATOM 13 C1' C B1231 14.918 84.379 75.560 1.00 48.15 C
ATOM 14 N1 C B1231 14.181 85.634 75.311 1.00 48.60 N
ATOM 15 C2 C B1231 12.935 85.812 75.928 1.00 47.83 C
ATOM 16 O2 C B1231 12.500 84.917 76.667 1.00 49.28 O
ATOM 17 N3 C B1231 12.238 86.948 75.700 1.00 46.16 N
ATOM 18 C4 C B1231 12.736 87.882 74.890 1.00 45.92 C
ATOM 19 N4 C B1231 12.012 88.979 74.686 1.00 46.09 N
ATOM 20 C5 C B1231 13.999 87.731 74.250 1.00 46.42 C
ATOM 21 C6 C B1231 14.684 86.605 74.488 1.00 48.25 C
ATOM 22 P C B1232 14.620 82.310 71.300 1.00 51.34 P
ATOM 23 OP1 C B1232 15.098 81.210 70.436 1.00 51.29 O
ATOM 24 OP2 C B1232 14.527 83.688 70.748 1.00 52.62 O
ATOM 25 O5' C B1232 13.178 81.934 71.860 1.00 50.72 O
TER
Atoms:
OP1: (19.883,92.058,72.339)
OP2: (17.560,92.710,73.213)
C3': (18.705,87.939,74.718)
C1': (18.010,88.239,76.940)
C5': (20.031,90.124,74.654)
O4': (19.001,89.213,76.651)
C8: (16.367,90.065,76.280)
O2': (19.052,86.178,76.370)
C6: (13.345,89.276,77.901)
C5: (14.611,89.450,77.306)
C4: (15.560,88.474,77.551)
P: (18.936,92.204,73.468)
C4': (19.678,88.870,75.413)
C2': (18.144,87.144,75.887)
C2: (14.166,87.302,78.782)
N1: (13.150,88.167,78.642)
N3: (15.398,87.361,78.288)
N6: (12.341,90.146,77.782)
N7: (15.133,90.446,76.494)
N9: (16.703,88.895,76.911)
O5': (18.842,90.790,74.197)
O3': (19.323,87.126,73.734)
OP2: (17.560,92.710,73.213)
C3': (18.705,87.939,74.718)
C1': (18.010,88.239,76.940)
C5': (20.031,90.124,74.654)
O4': (19.001,89.213,76.651)
C8: (16.367,90.065,76.280)
O2': (19.052,86.178,76.370)
C6: (13.345,89.276,77.901)
C5: (14.611,89.450,77.306)
C4: (15.560,88.474,77.551)
P: (18.936,92.204,73.468)
C4': (19.678,88.870,75.413)
C2': (18.144,87.144,75.887)
C2: (14.166,87.302,78.782)
N1: (13.150,88.167,78.642)
N3: (15.398,87.361,78.288)
N6: (12.341,90.146,77.782)
N7: (15.133,90.446,76.494)
N9: (16.703,88.895,76.911)
O5': (18.842,90.790,74.197)
O3': (19.323,87.126,73.734)
C2: (12.935,85.812,75.928)
OP1: (19.436,86.083,71.456)
OP2: (17.711,87.928,71.994)
C4: (12.736,87.882,74.890)
O5': (17.451,85.641,72.923)
C3': (15.485,83.480,73.471)
C1': (14.918,84.379,75.560)
O4': (16.308,84.596,75.340)
C5': (17.897,84.410,73.520)
P: (18.497,86.730,72.416)
O2: (12.500,84.917,76.667)
C4': (16.762,83.739,74.257)
C2': (14.479,83.283,74.591)
O2': (14.616,82.026,75.225)
N1: (14.181,85.634,75.311)
N3: (12.238,86.948,75.700)
N4: (12.012,88.979,74.686)
C6: (14.684,86.605,74.488)
C5: (13.999,87.731,74.250)
O3': (15.555,82.356,72.607)
OP1: (19.436,86.083,71.456)
OP2: (17.711,87.928,71.994)
C4: (12.736,87.882,74.890)
O5': (17.451,85.641,72.923)
C3': (15.485,83.480,73.471)
C1': (14.918,84.379,75.560)
O4': (16.308,84.596,75.340)
C5': (17.897,84.410,73.520)
P: (18.497,86.730,72.416)
O2: (12.500,84.917,76.667)
C4': (16.762,83.739,74.257)
C2': (14.479,83.283,74.591)
O2': (14.616,82.026,75.225)
N1: (14.181,85.634,75.311)
N3: (12.238,86.948,75.700)
N4: (12.012,88.979,74.686)
C6: (14.684,86.605,74.488)
C5: (13.999,87.731,74.250)
O3': (15.555,82.356,72.607)
Image (generated by PyMOL):