Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2987:2988
Extra
PDB:
ATOM 1 O3' U A 986 -33.595 -16.970 86.153 1.00 85.86 O
ATOM 2 P A A 987 -33.548 -17.681 87.603 1.00 68.13 P
ATOM 3 OP1 A A 987 -32.731 -16.808 88.462 1.00 67.61 O
ATOM 4 OP2 A A 987 -33.108 -19.108 87.413 1.00 69.30 O
ATOM 5 O5' A A 987 -35.084 -17.629 88.065 1.00 68.18 O
ATOM 6 C5' A A 987 -35.916 -18.787 88.029 1.00 69.15 C
ATOM 7 C4' A A 987 -37.394 -18.430 87.951 1.00 68.87 C
ATOM 8 O4' A A 987 -37.885 -18.687 86.614 1.00 68.84 O
ATOM 9 C3' A A 987 -38.317 -19.234 88.855 1.00 69.80 C
ATOM 10 O3' A A 987 -38.410 -18.689 90.153 1.00 69.66 O
ATOM 11 C2' A A 987 -39.647 -19.246 88.104 1.00 69.72 C
ATOM 12 O2' A A 987 -40.416 -18.085 88.393 1.00 68.87 O
ATOM 13 C1' A A 987 -39.201 -19.185 86.651 1.00 69.34 C
ATOM 14 N9 A A 987 -39.208 -20.505 86.011 1.00 70.35 N
ATOM 15 C8 A A 987 -38.134 -21.351 85.885 1.00 71.01 C
ATOM 16 N7 A A 987 -38.383 -22.469 85.249 1.00 71.90 N
ATOM 17 C5 A A 987 -39.724 -22.344 84.931 1.00 71.81 C
ATOM 18 C6 A A 987 -40.591 -23.200 84.243 1.00 72.54 C
ATOM 19 N6 A A 987 -40.215 -24.391 83.752 1.00 73.52 N
ATOM 20 N1 A A 987 -41.858 -22.769 84.073 1.00 72.24 N
ATOM 21 C2 A A 987 -42.221 -21.590 84.573 1.00 71.31 C
ATOM 22 N3 A A 987 -41.490 -20.711 85.240 1.00 70.58 N
ATOM 23 C4 A A 987 -40.240 -21.145 85.387 1.00 70.87 C
ATOM 24 P C A 988 -38.479 -19.650 91.439 1.00 76.25 P
ATOM 25 OP1 C A 988 -38.351 -18.774 92.638 1.00 75.85 O
ATOM 26 OP2 C A 988 -37.496 -20.720 91.236 1.00 77.08 O
ATOM 27 O5' C A 988 -39.940 -20.253 91.372 1.00 76.85 O
TER
ATOM 1 O3' A B 987 -38.410 -18.689 90.153 1.00 69.66 O
ATOM 2 P C B 988 -38.479 -19.650 91.439 1.00 76.25 P
ATOM 3 OP1 C B 988 -38.351 -18.774 92.638 1.00 75.85 O
ATOM 4 OP2 C B 988 -37.496 -20.720 91.236 1.00 77.08 O
ATOM 5 O5' C B 988 -39.940 -20.253 91.372 1.00 76.85 O
ATOM 6 C5' C B 988 -41.073 -19.422 91.512 1.00 76.26 C
ATOM 7 C4' C B 988 -42.312 -20.135 91.050 1.00 76.87 C
ATOM 8 O4' C B 988 -42.188 -20.434 89.637 1.00 76.75 O
ATOM 9 C3' C B 988 -42.581 -21.481 91.699 1.00 78.25 C
ATOM 10 O3' C B 988 -43.270 -21.361 92.935 1.00 78.60 O
ATOM 11 C2' C B 988 -43.387 -22.200 90.635 1.00 78.69 C
ATOM 12 O2' C B 988 -44.729 -21.754 90.672 1.00 78.48 O
ATOM 13 C1' C B 988 -42.762 -21.673 89.349 1.00 77.82 C
ATOM 14 N1 C B 988 -41.709 -22.572 88.799 1.00 78.38 N
ATOM 15 C2 C B 988 -42.077 -23.452 87.784 1.00 78.98 C
ATOM 16 O2 C B 988 -43.263 -23.433 87.430 1.00 79.02 O
ATOM 17 N3 C B 988 -41.182 -24.304 87.220 1.00 79.56 N
ATOM 18 C4 C B 988 -39.924 -24.309 87.625 1.00 79.55 C
ATOM 19 N4 C B 988 -39.092 -25.170 87.046 1.00 80.18 N
ATOM 20 C5 C B 988 -39.492 -23.419 88.652 1.00 78.94 C
ATOM 21 C6 C B 988 -40.398 -22.578 89.200 1.00 78.37 C
ATOM 22 P C B 989 -42.473 -21.428 94.330 1.00 82.00 P
ATOM 23 OP1 C B 989 -43.413 -21.038 95.399 1.00 82.13 O
ATOM 24 OP2 C B 989 -41.236 -20.632 94.167 1.00 81.13 O
ATOM 25 O5' C B 989 -42.101 -22.978 94.451 1.00 83.40 O
TER
ATOM 2 P A A 987 -33.548 -17.681 87.603 1.00 68.13 P
ATOM 3 OP1 A A 987 -32.731 -16.808 88.462 1.00 67.61 O
ATOM 4 OP2 A A 987 -33.108 -19.108 87.413 1.00 69.30 O
ATOM 5 O5' A A 987 -35.084 -17.629 88.065 1.00 68.18 O
ATOM 6 C5' A A 987 -35.916 -18.787 88.029 1.00 69.15 C
ATOM 7 C4' A A 987 -37.394 -18.430 87.951 1.00 68.87 C
ATOM 8 O4' A A 987 -37.885 -18.687 86.614 1.00 68.84 O
ATOM 9 C3' A A 987 -38.317 -19.234 88.855 1.00 69.80 C
ATOM 10 O3' A A 987 -38.410 -18.689 90.153 1.00 69.66 O
ATOM 11 C2' A A 987 -39.647 -19.246 88.104 1.00 69.72 C
ATOM 12 O2' A A 987 -40.416 -18.085 88.393 1.00 68.87 O
ATOM 13 C1' A A 987 -39.201 -19.185 86.651 1.00 69.34 C
ATOM 14 N9 A A 987 -39.208 -20.505 86.011 1.00 70.35 N
ATOM 15 C8 A A 987 -38.134 -21.351 85.885 1.00 71.01 C
ATOM 16 N7 A A 987 -38.383 -22.469 85.249 1.00 71.90 N
ATOM 17 C5 A A 987 -39.724 -22.344 84.931 1.00 71.81 C
ATOM 18 C6 A A 987 -40.591 -23.200 84.243 1.00 72.54 C
ATOM 19 N6 A A 987 -40.215 -24.391 83.752 1.00 73.52 N
ATOM 20 N1 A A 987 -41.858 -22.769 84.073 1.00 72.24 N
ATOM 21 C2 A A 987 -42.221 -21.590 84.573 1.00 71.31 C
ATOM 22 N3 A A 987 -41.490 -20.711 85.240 1.00 70.58 N
ATOM 23 C4 A A 987 -40.240 -21.145 85.387 1.00 70.87 C
ATOM 24 P C A 988 -38.479 -19.650 91.439 1.00 76.25 P
ATOM 25 OP1 C A 988 -38.351 -18.774 92.638 1.00 75.85 O
ATOM 26 OP2 C A 988 -37.496 -20.720 91.236 1.00 77.08 O
ATOM 27 O5' C A 988 -39.940 -20.253 91.372 1.00 76.85 O
TER
ATOM 1 O3' A B 987 -38.410 -18.689 90.153 1.00 69.66 O
ATOM 2 P C B 988 -38.479 -19.650 91.439 1.00 76.25 P
ATOM 3 OP1 C B 988 -38.351 -18.774 92.638 1.00 75.85 O
ATOM 4 OP2 C B 988 -37.496 -20.720 91.236 1.00 77.08 O
ATOM 5 O5' C B 988 -39.940 -20.253 91.372 1.00 76.85 O
ATOM 6 C5' C B 988 -41.073 -19.422 91.512 1.00 76.26 C
ATOM 7 C4' C B 988 -42.312 -20.135 91.050 1.00 76.87 C
ATOM 8 O4' C B 988 -42.188 -20.434 89.637 1.00 76.75 O
ATOM 9 C3' C B 988 -42.581 -21.481 91.699 1.00 78.25 C
ATOM 10 O3' C B 988 -43.270 -21.361 92.935 1.00 78.60 O
ATOM 11 C2' C B 988 -43.387 -22.200 90.635 1.00 78.69 C
ATOM 12 O2' C B 988 -44.729 -21.754 90.672 1.00 78.48 O
ATOM 13 C1' C B 988 -42.762 -21.673 89.349 1.00 77.82 C
ATOM 14 N1 C B 988 -41.709 -22.572 88.799 1.00 78.38 N
ATOM 15 C2 C B 988 -42.077 -23.452 87.784 1.00 78.98 C
ATOM 16 O2 C B 988 -43.263 -23.433 87.430 1.00 79.02 O
ATOM 17 N3 C B 988 -41.182 -24.304 87.220 1.00 79.56 N
ATOM 18 C4 C B 988 -39.924 -24.309 87.625 1.00 79.55 C
ATOM 19 N4 C B 988 -39.092 -25.170 87.046 1.00 80.18 N
ATOM 20 C5 C B 988 -39.492 -23.419 88.652 1.00 78.94 C
ATOM 21 C6 C B 988 -40.398 -22.578 89.200 1.00 78.37 C
ATOM 22 P C B 989 -42.473 -21.428 94.330 1.00 82.00 P
ATOM 23 OP1 C B 989 -43.413 -21.038 95.399 1.00 82.13 O
ATOM 24 OP2 C B 989 -41.236 -20.632 94.167 1.00 81.13 O
ATOM 25 O5' C B 989 -42.101 -22.978 94.451 1.00 83.40 O
TER
Atoms:
OP1: (-32.731,-16.808,88.462)
OP2: (-33.108,-19.108,87.413)
C3': (-38.317,-19.234,88.855)
C1': (-39.201,-19.185,86.651)
C5': (-35.916,-18.787,88.029)
O4': (-37.885,-18.687,86.614)
C8: (-38.134,-21.351,85.885)
O2': (-40.416,-18.085,88.393)
C6: (-40.591,-23.200,84.243)
C5: (-39.724,-22.344,84.931)
C4: (-40.240,-21.145,85.387)
P: (-33.548,-17.681,87.603)
C4': (-37.394,-18.430,87.951)
C2': (-39.647,-19.246,88.104)
C2: (-42.221,-21.590,84.573)
N1: (-41.858,-22.769,84.073)
N3: (-41.490,-20.711,85.240)
N6: (-40.215,-24.391,83.752)
N7: (-38.383,-22.469,85.249)
N9: (-39.208,-20.505,86.011)
O5': (-35.084,-17.629,88.065)
O3': (-38.410,-18.689,90.153)
OP2: (-33.108,-19.108,87.413)
C3': (-38.317,-19.234,88.855)
C1': (-39.201,-19.185,86.651)
C5': (-35.916,-18.787,88.029)
O4': (-37.885,-18.687,86.614)
C8: (-38.134,-21.351,85.885)
O2': (-40.416,-18.085,88.393)
C6: (-40.591,-23.200,84.243)
C5: (-39.724,-22.344,84.931)
C4: (-40.240,-21.145,85.387)
P: (-33.548,-17.681,87.603)
C4': (-37.394,-18.430,87.951)
C2': (-39.647,-19.246,88.104)
C2: (-42.221,-21.590,84.573)
N1: (-41.858,-22.769,84.073)
N3: (-41.490,-20.711,85.240)
N6: (-40.215,-24.391,83.752)
N7: (-38.383,-22.469,85.249)
N9: (-39.208,-20.505,86.011)
O5': (-35.084,-17.629,88.065)
O3': (-38.410,-18.689,90.153)
C2: (-42.077,-23.452,87.784)
OP1: (-38.351,-18.774,92.638)
OP2: (-37.496,-20.720,91.236)
C4: (-39.924,-24.309,87.625)
O5': (-39.940,-20.253,91.372)
C3': (-42.581,-21.481,91.699)
C1': (-42.762,-21.673,89.349)
O4': (-42.188,-20.434,89.637)
C5': (-41.073,-19.422,91.512)
P: (-38.479,-19.650,91.439)
O2: (-43.263,-23.433,87.430)
C4': (-42.312,-20.135,91.050)
C2': (-43.387,-22.200,90.635)
O2': (-44.729,-21.754,90.672)
N1: (-41.709,-22.572,88.799)
N3: (-41.182,-24.304,87.220)
N4: (-39.092,-25.170,87.046)
C6: (-40.398,-22.578,89.200)
C5: (-39.492,-23.419,88.652)
O3': (-43.270,-21.361,92.935)
OP1: (-38.351,-18.774,92.638)
OP2: (-37.496,-20.720,91.236)
C4: (-39.924,-24.309,87.625)
O5': (-39.940,-20.253,91.372)
C3': (-42.581,-21.481,91.699)
C1': (-42.762,-21.673,89.349)
O4': (-42.188,-20.434,89.637)
C5': (-41.073,-19.422,91.512)
P: (-38.479,-19.650,91.439)
O2: (-43.263,-23.433,87.430)
C4': (-42.312,-20.135,91.050)
C2': (-43.387,-22.200,90.635)
O2': (-44.729,-21.754,90.672)
N1: (-41.709,-22.572,88.799)
N3: (-41.182,-24.304,87.220)
N4: (-39.092,-25.170,87.046)
C6: (-40.398,-22.578,89.200)
C5: (-39.492,-23.419,88.652)
O3': (-43.270,-21.361,92.935)
Image (generated by PyMOL):