ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52230:52231

Extra

PDB:
ATOM 1 O3' G A2229 170.349 -24.910 221.337 1.00 64.65 O
ATOM 2 P A A2230 169.386 -24.592 222.578 1.00 57.24 P
ATOM 3 OP1 A A2230 170.042 -23.478 223.402 1.00 56.95 O
ATOM 4 OP2 A A2230 169.114 -25.937 223.261 1.00 57.34 O
ATOM 5 O5' A A2230 168.040 -24.041 221.803 1.00 57.18 O
ATOM 6 C5' A A2230 167.246 -24.902 220.988 1.00 57.43 C
ATOM 7 C4' A A2230 166.011 -25.358 221.737 1.00 57.28 C
ATOM 8 O4' A A2230 165.221 -24.206 222.096 1.00 56.95 O
ATOM 9 C3' A A2230 165.075 -26.274 220.968 1.00 57.54 C
ATOM 10 O3' A A2230 165.307 -27.622 221.242 1.00 57.76 O
ATOM 11 C2' A A2230 163.681 -25.827 221.367 1.00 57.29 C
ATOM 12 O2' A A2230 163.250 -26.504 222.540 1.00 57.17 O
ATOM 13 C1' A A2230 163.897 -24.363 221.694 1.00 56.97 C
ATOM 14 N9 A A2230 163.655 -23.473 220.532 1.00 57.02 N
ATOM 15 C8 A A2230 164.540 -22.584 219.984 1.00 57.03 C
ATOM 16 N7 A A2230 164.079 -21.879 218.992 1.00 57.08 N
ATOM 17 C5 A A2230 162.778 -22.317 218.858 1.00 57.11 C
ATOM 18 C6 A A2230 161.756 -21.960 217.981 1.00 57.17 C
ATOM 19 N6 A A2230 161.833 -21.063 217.019 1.00 57.23 N
ATOM 20 N1 A A2230 160.602 -22.566 218.128 1.00 57.19 N
ATOM 21 C2 A A2230 160.474 -23.469 219.084 1.00 57.14 C
ATOM 22 N3 A A2230 161.334 -23.913 219.967 1.00 57.09 N
ATOM 23 C4 A A2230 162.497 -23.286 219.800 1.00 57.07 C
ATOM 24 P C A2231 165.459 -28.653 220.042 1.00 51.49 P
ATOM 25 OP1 C A2231 166.102 -29.864 220.578 1.00 51.68 O
ATOM 26 OP2 C A2231 166.114 -27.922 218.935 1.00 51.62 O
ATOM 27 O5' C A2231 163.959 -28.985 219.632 1.00 51.55 O
TER

ATOM 1 O3' A B2230 165.307 -27.622 221.242 1.00 57.76 O
ATOM 2 P C B2231 165.459 -28.653 220.042 1.00 51.49 P
ATOM 3 OP1 C B2231 166.102 -29.864 220.578 1.00 51.68 O
ATOM 4 OP2 C B2231 166.114 -27.922 218.935 1.00 51.62 O
ATOM 5 O5' C B2231 163.959 -28.985 219.632 1.00 51.55 O
ATOM 6 C5' C B2231 162.979 -29.340 220.590 1.00 51.37 C
ATOM 7 C4' C B2231 161.626 -29.397 219.949 1.00 51.44 C
ATOM 8 O4' C B2231 161.043 -28.070 219.870 1.00 51.16 O
ATOM 9 C3' C B2231 161.611 -29.872 218.519 1.00 51.83 C
ATOM 10 O3' C B2231 161.672 -31.251 218.438 1.00 52.14 O
ATOM 11 C2' C B2231 160.302 -29.327 218.021 1.00 51.76 C
ATOM 12 O2' C B2231 159.221 -30.076 218.570 1.00 51.75 O
ATOM 13 C1' C B2231 160.307 -27.960 218.672 1.00 51.35 C
ATOM 14 N1 C B2231 160.957 -26.959 217.829 1.00 51.35 N
ATOM 15 C2 C B2231 160.171 -26.268 216.923 1.00 51.38 C
ATOM 16 O2 C B2231 158.972 -26.578 216.855 1.00 51.40 O
ATOM 17 N3 C B2231 160.759 -25.311 216.187 1.00 51.38 N
ATOM 18 C4 C B2231 162.047 -25.063 216.363 1.00 51.36 C
ATOM 19 N4 C B2231 162.649 -24.146 215.651 1.00 51.39 N
ATOM 20 C5 C B2231 162.851 -25.749 217.274 1.00 51.34 C
ATOM 21 C6 C B2231 162.271 -26.689 217.987 1.00 51.33 C
ATOM 22 P U B2232 162.330 -31.947 217.181 1.00 50.43 P
ATOM 23 OP1 U B2232 162.181 -33.424 217.411 1.00 50.70 O
ATOM 24 OP2 U B2232 163.702 -31.352 217.018 1.00 50.42 O
ATOM 25 O5' U B2232 161.394 -31.458 215.956 1.00 50.54 O
TER

Atoms:
OP1: (170.042,-23.478,223.402)
OP2: (169.114,-25.937,223.261)
C3': (165.075,-26.274,220.968)
C1': (163.897,-24.363,221.694)
C5': (167.246,-24.902,220.988)
O4': (165.221,-24.206,222.096)
C8: (164.540,-22.584,219.984)
O2': (163.250,-26.504,222.540)
C6: (161.756,-21.960,217.981)
C5: (162.778,-22.317,218.858)
C4: (162.497,-23.286,219.800)
P: (169.386,-24.592,222.578)
C4': (166.011,-25.358,221.737)
C2': (163.681,-25.827,221.367)
C2: (160.474,-23.469,219.084)
N1: (160.602,-22.566,218.128)
N3: (161.334,-23.913,219.967)
N6: (161.833,-21.063,217.019)
N7: (164.079,-21.879,218.992)
N9: (163.655,-23.473,220.532)
O5': (168.040,-24.041,221.803)
O3': (165.307,-27.622,221.242)
C2: (160.171,-26.268,216.923)
OP1: (166.102,-29.864,220.578)
OP2: (166.114,-27.922,218.935)
C4: (162.047,-25.063,216.363)
O5': (163.959,-28.985,219.632)
C3': (161.611,-29.872,218.519)
C1': (160.307,-27.960,218.672)
O4': (161.043,-28.070,219.870)
C5': (162.979,-29.340,220.590)
P: (165.459,-28.653,220.042)
O2: (158.972,-26.578,216.855)
C4': (161.626,-29.397,219.949)
C2': (160.302,-29.327,218.021)
O2': (159.221,-30.076,218.570)
N1: (160.957,-26.959,217.829)
N3: (160.759,-25.311,216.187)
N4: (162.649,-24.146,215.651)
C6: (162.271,-26.689,217.987)
C5: (162.851,-25.749,217.274)
O3': (161.672,-31.251,218.438)
Image (generated by PyMOL):
PyMOL image
show in jmol