Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01233:01234
Extra
PDB:
ATOM 1 O3' C A1232 10.111 79.164 71.062 1.00 55.92 O
ATOM 2 P A A1233 9.680 79.280 69.520 1.00 56.23 P
ATOM 3 OP1 A A1233 9.734 77.909 68.966 1.00 56.80 O
ATOM 4 OP2 A A1233 10.467 80.361 68.872 1.00 57.13 O
ATOM 5 O5' A A1233 8.165 79.755 69.592 1.00 53.36 O
ATOM 6 C5' A A1233 7.169 78.924 70.203 1.00 50.08 C
ATOM 7 C4' A A1233 5.821 79.595 70.136 1.00 50.22 C
ATOM 8 O4' A A1233 5.782 80.739 71.027 1.00 49.67 O
ATOM 9 C3' A A1233 5.451 80.180 68.787 1.00 49.91 C
ATOM 10 O3' A A1233 4.994 79.174 67.901 1.00 48.70 O
ATOM 11 C2' A A1233 4.376 81.190 69.164 1.00 50.18 C
ATOM 12 O2' A A1233 3.130 80.587 69.441 1.00 50.79 O
ATOM 13 C1' A A1233 4.942 81.745 70.472 1.00 50.18 C
ATOM 14 N9 A A1233 5.731 82.967 70.293 1.00 49.83 N
ATOM 15 C8 A A1233 7.098 83.095 70.170 1.00 49.43 C
ATOM 16 N7 A A1233 7.503 84.334 70.031 1.00 48.13 N
ATOM 17 C5 A A1233 6.328 85.073 70.062 1.00 48.85 C
ATOM 18 C6 A A1233 6.076 86.451 69.960 1.00 48.21 C
ATOM 19 N6 A A1233 7.030 87.368 69.796 1.00 48.36 N
ATOM 20 N1 A A1233 4.791 86.862 70.028 1.00 48.96 N
ATOM 21 C2 A A1233 3.830 85.942 70.181 1.00 48.75 C
ATOM 22 N3 A A1233 3.940 84.619 70.286 1.00 49.24 N
ATOM 23 C4 A A1233 5.229 84.244 70.219 1.00 49.40 C
ATOM 24 P C A1234 5.235 79.337 66.324 1.00 50.09 P
ATOM 25 OP1 C A1234 4.559 78.182 65.663 1.00 52.05 O
ATOM 26 OP2 C A1234 6.677 79.575 66.082 1.00 50.21 O
ATOM 27 O5' C A1234 4.424 80.653 65.955 1.00 47.39 O
TER
ATOM 1 O3' A B1233 4.994 79.174 67.901 1.00 48.70 O
ATOM 2 P C B1234 5.235 79.337 66.324 1.00 50.09 P
ATOM 3 OP1 C B1234 4.559 78.182 65.663 1.00 52.05 O
ATOM 4 OP2 C B1234 6.677 79.575 66.082 1.00 50.21 O
ATOM 5 O5' C B1234 4.424 80.653 65.955 1.00 47.39 O
ATOM 6 C5' C B1234 2.999 80.655 66.006 1.00 46.62 C
ATOM 7 C4' C B1234 2.462 82.031 65.717 1.00 48.81 C
ATOM 8 O4' C B1234 2.851 82.942 66.779 1.00 50.26 O
ATOM 9 C3' C B1234 2.987 82.719 64.470 1.00 49.01 C
ATOM 10 O3' C B1234 2.382 82.242 63.282 1.00 50.09 O
ATOM 11 C2' C B1234 2.625 84.167 64.756 1.00 49.97 C
ATOM 12 O2' C B1234 1.257 84.436 64.559 1.00 50.93 O
ATOM 13 C1' C B1234 2.939 84.260 66.252 1.00 50.67 C
ATOM 14 N1 C B1234 4.296 84.790 66.481 1.00 51.03 N
ATOM 15 C2 C B1234 4.491 86.175 66.408 1.00 52.29 C
ATOM 16 O2 C B1234 3.509 86.913 66.211 1.00 53.80 O
ATOM 17 N3 C B1234 5.737 86.675 66.558 1.00 52.23 N
ATOM 18 C4 C B1234 6.758 85.854 66.784 1.00 51.55 C
ATOM 19 N4 C B1234 7.967 86.391 66.915 1.00 53.96 N
ATOM 20 C5 C B1234 6.586 84.443 66.886 1.00 51.81 C
ATOM 21 C6 C B1234 5.351 83.959 66.734 1.00 50.54 C
ATOM 22 P U B1235 3.288 81.979 61.982 1.00 51.52 P
ATOM 23 OP1 U B1235 2.417 81.508 60.872 1.00 52.87 O
ATOM 24 OP2 U B1235 4.443 81.150 62.404 1.00 50.37 O
ATOM 25 O5' U B1235 3.813 83.428 61.588 1.00 52.66 O
TER
ATOM 2 P A A1233 9.680 79.280 69.520 1.00 56.23 P
ATOM 3 OP1 A A1233 9.734 77.909 68.966 1.00 56.80 O
ATOM 4 OP2 A A1233 10.467 80.361 68.872 1.00 57.13 O
ATOM 5 O5' A A1233 8.165 79.755 69.592 1.00 53.36 O
ATOM 6 C5' A A1233 7.169 78.924 70.203 1.00 50.08 C
ATOM 7 C4' A A1233 5.821 79.595 70.136 1.00 50.22 C
ATOM 8 O4' A A1233 5.782 80.739 71.027 1.00 49.67 O
ATOM 9 C3' A A1233 5.451 80.180 68.787 1.00 49.91 C
ATOM 10 O3' A A1233 4.994 79.174 67.901 1.00 48.70 O
ATOM 11 C2' A A1233 4.376 81.190 69.164 1.00 50.18 C
ATOM 12 O2' A A1233 3.130 80.587 69.441 1.00 50.79 O
ATOM 13 C1' A A1233 4.942 81.745 70.472 1.00 50.18 C
ATOM 14 N9 A A1233 5.731 82.967 70.293 1.00 49.83 N
ATOM 15 C8 A A1233 7.098 83.095 70.170 1.00 49.43 C
ATOM 16 N7 A A1233 7.503 84.334 70.031 1.00 48.13 N
ATOM 17 C5 A A1233 6.328 85.073 70.062 1.00 48.85 C
ATOM 18 C6 A A1233 6.076 86.451 69.960 1.00 48.21 C
ATOM 19 N6 A A1233 7.030 87.368 69.796 1.00 48.36 N
ATOM 20 N1 A A1233 4.791 86.862 70.028 1.00 48.96 N
ATOM 21 C2 A A1233 3.830 85.942 70.181 1.00 48.75 C
ATOM 22 N3 A A1233 3.940 84.619 70.286 1.00 49.24 N
ATOM 23 C4 A A1233 5.229 84.244 70.219 1.00 49.40 C
ATOM 24 P C A1234 5.235 79.337 66.324 1.00 50.09 P
ATOM 25 OP1 C A1234 4.559 78.182 65.663 1.00 52.05 O
ATOM 26 OP2 C A1234 6.677 79.575 66.082 1.00 50.21 O
ATOM 27 O5' C A1234 4.424 80.653 65.955 1.00 47.39 O
TER
ATOM 1 O3' A B1233 4.994 79.174 67.901 1.00 48.70 O
ATOM 2 P C B1234 5.235 79.337 66.324 1.00 50.09 P
ATOM 3 OP1 C B1234 4.559 78.182 65.663 1.00 52.05 O
ATOM 4 OP2 C B1234 6.677 79.575 66.082 1.00 50.21 O
ATOM 5 O5' C B1234 4.424 80.653 65.955 1.00 47.39 O
ATOM 6 C5' C B1234 2.999 80.655 66.006 1.00 46.62 C
ATOM 7 C4' C B1234 2.462 82.031 65.717 1.00 48.81 C
ATOM 8 O4' C B1234 2.851 82.942 66.779 1.00 50.26 O
ATOM 9 C3' C B1234 2.987 82.719 64.470 1.00 49.01 C
ATOM 10 O3' C B1234 2.382 82.242 63.282 1.00 50.09 O
ATOM 11 C2' C B1234 2.625 84.167 64.756 1.00 49.97 C
ATOM 12 O2' C B1234 1.257 84.436 64.559 1.00 50.93 O
ATOM 13 C1' C B1234 2.939 84.260 66.252 1.00 50.67 C
ATOM 14 N1 C B1234 4.296 84.790 66.481 1.00 51.03 N
ATOM 15 C2 C B1234 4.491 86.175 66.408 1.00 52.29 C
ATOM 16 O2 C B1234 3.509 86.913 66.211 1.00 53.80 O
ATOM 17 N3 C B1234 5.737 86.675 66.558 1.00 52.23 N
ATOM 18 C4 C B1234 6.758 85.854 66.784 1.00 51.55 C
ATOM 19 N4 C B1234 7.967 86.391 66.915 1.00 53.96 N
ATOM 20 C5 C B1234 6.586 84.443 66.886 1.00 51.81 C
ATOM 21 C6 C B1234 5.351 83.959 66.734 1.00 50.54 C
ATOM 22 P U B1235 3.288 81.979 61.982 1.00 51.52 P
ATOM 23 OP1 U B1235 2.417 81.508 60.872 1.00 52.87 O
ATOM 24 OP2 U B1235 4.443 81.150 62.404 1.00 50.37 O
ATOM 25 O5' U B1235 3.813 83.428 61.588 1.00 52.66 O
TER
Atoms:
OP1: (9.734,77.909,68.966)
OP2: (10.467,80.361,68.872)
C3': (5.451,80.180,68.787)
C1': (4.942,81.745,70.472)
C5': (7.169,78.924,70.203)
O4': (5.782,80.739,71.027)
C8: (7.098,83.095,70.170)
O2': (3.130,80.587,69.441)
C6: (6.076,86.451,69.960)
C5: (6.328,85.073,70.062)
C4: (5.229,84.244,70.219)
P: (9.680,79.280,69.520)
C4': (5.821,79.595,70.136)
C2': (4.376,81.190,69.164)
C2: (3.830,85.942,70.181)
N1: (4.791,86.862,70.028)
N3: (3.940,84.619,70.286)
N6: (7.030,87.368,69.796)
N7: (7.503,84.334,70.031)
N9: (5.731,82.967,70.293)
O5': (8.165,79.755,69.592)
O3': (4.994,79.174,67.901)
OP2: (10.467,80.361,68.872)
C3': (5.451,80.180,68.787)
C1': (4.942,81.745,70.472)
C5': (7.169,78.924,70.203)
O4': (5.782,80.739,71.027)
C8: (7.098,83.095,70.170)
O2': (3.130,80.587,69.441)
C6: (6.076,86.451,69.960)
C5: (6.328,85.073,70.062)
C4: (5.229,84.244,70.219)
P: (9.680,79.280,69.520)
C4': (5.821,79.595,70.136)
C2': (4.376,81.190,69.164)
C2: (3.830,85.942,70.181)
N1: (4.791,86.862,70.028)
N3: (3.940,84.619,70.286)
N6: (7.030,87.368,69.796)
N7: (7.503,84.334,70.031)
N9: (5.731,82.967,70.293)
O5': (8.165,79.755,69.592)
O3': (4.994,79.174,67.901)
C2: (4.491,86.175,66.408)
OP1: (4.559,78.182,65.663)
OP2: (6.677,79.575,66.082)
C4: (6.758,85.854,66.784)
O5': (4.424,80.653,65.955)
C3': (2.987,82.719,64.470)
C1': (2.939,84.260,66.252)
O4': (2.851,82.942,66.779)
C5': (2.999,80.655,66.006)
P: (5.235,79.337,66.324)
O2: (3.509,86.913,66.211)
C4': (2.462,82.031,65.717)
C2': (2.625,84.167,64.756)
O2': (1.257,84.436,64.559)
N1: (4.296,84.790,66.481)
N3: (5.737,86.675,66.558)
N4: (7.967,86.391,66.915)
C6: (5.351,83.959,66.734)
C5: (6.586,84.443,66.886)
O3': (2.382,82.242,63.282)
OP1: (4.559,78.182,65.663)
OP2: (6.677,79.575,66.082)
C4: (6.758,85.854,66.784)
O5': (4.424,80.653,65.955)
C3': (2.987,82.719,64.470)
C1': (2.939,84.260,66.252)
O4': (2.851,82.942,66.779)
C5': (2.999,80.655,66.006)
P: (5.235,79.337,66.324)
O2: (3.509,86.913,66.211)
C4': (2.462,82.031,65.717)
C2': (2.625,84.167,64.756)
O2': (1.257,84.436,64.559)
N1: (4.296,84.790,66.481)
N3: (5.737,86.675,66.558)
N4: (7.967,86.391,66.915)
C6: (5.351,83.959,66.734)
C5: (6.586,84.443,66.886)
O3': (2.382,82.242,63.282)
Image (generated by PyMOL):