ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SIU:F7:F21

Extra

PDB:
ATOM 1 O3' A A 6 -7.236 14.284 88.034 1.00 59.91 O
ATOM 2 P A A 7 -8.136 13.239 88.824 1.00 63.97 P
ATOM 3 OP1 A A 7 -9.431 13.140 88.097 1.00 58.28 O
ATOM 4 OP2 A A 7 -8.146 13.658 90.250 1.00 65.49 O
ATOM 5 O5' A A 7 -7.321 11.892 88.662 1.00 58.84 O
ATOM 6 C5' A A 7 -5.904 11.888 88.731 1.00 57.74 C
ATOM 7 C4' A A 7 -5.355 10.556 88.300 1.00 59.01 C
ATOM 8 O4' A A 7 -3.908 10.576 88.409 1.00 60.37 O
ATOM 9 C3' A A 7 -5.810 9.377 89.130 1.00 58.42 C
ATOM 10 O3' A A 7 -5.719 8.201 88.327 1.00 51.96 O
ATOM 11 C2' A A 7 -4.742 9.337 90.229 1.00 55.61 C
ATOM 12 O2' A A 7 -4.631 8.096 90.895 1.00 54.70 O
ATOM 13 C1' A A 7 -3.494 9.653 89.413 1.00 62.32 C
ATOM 14 N9 A A 7 -2.383 10.271 90.158 1.00 57.55 N
ATOM 15 C8 A A 7 -1.099 9.784 90.189 1.00 56.12 C
ATOM 16 N7 A A 7 -0.258 10.550 90.815 1.00 59.57 N
ATOM 17 C5 A A 7 -1.030 11.631 91.209 1.00 58.18 C
ATOM 18 C6 A A 7 -0.712 12.785 91.925 1.00 59.61 C
ATOM 19 N6 A A 7 0.511 13.026 92.371 1.00 60.16 N
ATOM 20 N1 A A 7 -1.683 13.684 92.177 1.00 60.31 N
ATOM 21 C2 A A 7 -2.909 13.423 91.719 1.00 57.46 C
ATOM 22 N3 A A 7 -3.333 12.368 91.022 1.00 57.94 N
ATOM 23 C4 A A 7 -2.334 11.492 90.795 1.00 56.98 C
ATOM 24 P U A 8 -6.739 6.994 88.537 1.00 55.03 P
ATOM 25 OP1 U A 8 -7.144 7.009 89.969 1.00 61.17 O
ATOM 26 OP2 U A 8 -6.101 5.782 87.997 1.00 57.20 O
ATOM 27 O5' U A 8 -7.971 7.410 87.639 1.00 62.60 O
TER

ATOM 1 O3' G B 20 5.329 11.799 88.398 1.00 69.72 O
ATOM 2 P A B 21 5.690 11.759 89.973 1.00 70.96 P
ATOM 3 OP1 A B 21 7.158 11.673 90.083 1.00 69.24 O
ATOM 4 OP2 A B 21 4.867 10.689 90.599 1.00 65.47 O
ATOM 5 O5' A B 21 5.196 13.182 90.459 1.00 62.50 O
ATOM 6 C5' A B 21 5.885 14.360 90.062 1.00 63.57 C
ATOM 7 C4' A B 21 5.154 15.590 90.510 1.00 65.93 C
ATOM 8 O4' A B 21 4.011 15.787 89.639 1.00 67.69 O
ATOM 9 C3' A B 21 4.604 15.503 91.930 1.00 64.87 C
ATOM 10 O3' A B 21 4.597 16.787 92.542 1.00 73.18 O
ATOM 11 C2' A B 21 3.181 15.031 91.718 1.00 67.33 C
ATOM 12 O2' A B 21 2.290 15.402 92.735 1.00 61.90 O
ATOM 13 C1' A B 21 2.811 15.686 90.387 1.00 69.03 C
ATOM 14 N9 A B 21 1.839 14.894 89.627 1.00 64.19 N
ATOM 15 C8 A B 21 2.013 13.686 88.997 1.00 64.84 C
ATOM 16 N7 A B 21 0.909 13.216 88.456 1.00 63.96 N
ATOM 17 C5 A B 21 -0.055 14.157 88.795 1.00 63.70 C
ATOM 18 C6 A B 21 -1.435 14.253 88.541 1.00 60.87 C
ATOM 19 N6 A B 21 -2.134 13.348 87.855 1.00 61.85 N
ATOM 20 N1 A B 21 -2.094 15.327 89.009 1.00 61.29 N
ATOM 21 C2 A B 21 -1.413 16.241 89.702 1.00 64.46 C
ATOM 22 N3 A B 21 -0.118 16.265 89.998 1.00 66.06 N
ATOM 23 C4 A B 21 0.506 15.182 89.521 1.00 63.42 C
ATOM 24 P G B 22 5.282 16.984 93.981 1.00 76.81 P
ATOM 25 OP1 G B 22 6.750 16.903 93.767 1.00 77.46 O
ATOM 26 OP2 G B 22 4.645 16.024 94.900 1.00 64.49 O
ATOM 27 O5' G B 22 4.873 18.464 94.383 1.00 63.53 O
TER

Atoms:
OP1: (-9.431,13.140,88.097)
OP2: (-8.146,13.658,90.250)
C3': (-5.810,9.377,89.130)
C1': (-3.494,9.653,89.413)
C5': (-5.904,11.888,88.731)
O4': (-3.908,10.576,88.409)
C8: (-1.099,9.784,90.189)
O2': (-4.631,8.096,90.895)
C6: (-0.712,12.785,91.925)
C5: (-1.030,11.631,91.209)
C4: (-2.334,11.492,90.795)
P: (-8.136,13.239,88.824)
C4': (-5.355,10.556,88.300)
C2': (-4.742,9.337,90.229)
C2: (-2.909,13.423,91.719)
N1: (-1.683,13.684,92.177)
N3: (-3.333,12.368,91.022)
N6: (0.511,13.026,92.371)
N7: (-0.258,10.550,90.815)
N9: (-2.383,10.271,90.158)
O5': (-7.321,11.892,88.662)
O3': (-5.719,8.201,88.327)
OP1: (7.158,11.673,90.083)
OP2: (4.867,10.689,90.599)
C3': (4.604,15.503,91.930)
C1': (2.811,15.686,90.387)
C5': (5.885,14.360,90.062)
O4': (4.011,15.787,89.639)
C8: (2.013,13.686,88.997)
O2': (2.290,15.402,92.735)
C6: (-1.435,14.253,88.541)
C5: (-0.055,14.157,88.795)
C4: (0.506,15.182,89.521)
P: (5.690,11.759,89.973)
C4': (5.154,15.590,90.510)
C2': (3.181,15.031,91.718)
C2: (-1.413,16.241,89.702)
N1: (-2.094,15.327,89.009)
N3: (-0.118,16.265,89.998)
N6: (-2.134,13.348,87.855)
N7: (0.909,13.216,88.456)
N9: (1.839,14.894,89.627)
O5': (5.196,13.182,90.459)
O3': (4.597,16.787,92.542)
Image (generated by PyMOL):
PyMOL image
show in jmol