Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0335:0336
Extra
PDB:
ATOM 1 O3' U A 334 26.238 129.104 25.993 1.00 50.05 O
ATOM 2 P A A 335 26.805 128.756 24.532 1.00 50.02 P
ATOM 3 OP1 A A 335 27.820 127.677 24.636 1.00 47.40 O
ATOM 4 OP2 A A 335 27.175 130.044 23.892 1.00 50.10 O
ATOM 5 O5' A A 335 25.537 128.144 23.782 1.00 52.62 O
ATOM 6 C5' A A 335 24.944 126.903 24.228 1.00 52.80 C
ATOM 7 C4' A A 335 23.811 126.490 23.314 1.00 54.49 C
ATOM 8 O4' A A 335 22.728 127.456 23.395 1.00 56.96 O
ATOM 9 C3' A A 335 24.127 126.416 21.831 1.00 54.83 C
ATOM 10 O3' A A 335 24.784 125.202 21.483 1.00 54.45 O
ATOM 11 C2' A A 335 22.743 126.537 21.206 1.00 55.95 C
ATOM 12 O2' A A 335 22.004 125.331 21.262 1.00 56.97 O
ATOM 13 C1' A A 335 22.086 127.560 22.133 1.00 57.24 C
ATOM 14 N9 A A 335 22.229 128.937 21.658 1.00 60.84 N
ATOM 15 C8 A A 335 23.142 129.882 22.070 1.00 62.14 C
ATOM 16 N7 A A 335 23.025 131.035 21.459 1.00 63.20 N
ATOM 17 C5 A A 335 21.965 130.840 20.583 1.00 64.03 C
ATOM 18 C6 A A 335 21.345 131.685 19.646 1.00 63.67 C
ATOM 19 N6 A A 335 21.711 132.952 19.437 1.00 63.25 N
ATOM 20 N1 A A 335 20.320 131.179 18.926 1.00 63.59 N
ATOM 21 C2 A A 335 19.946 129.914 19.145 1.00 62.43 C
ATOM 22 N3 A A 335 20.443 129.024 19.997 1.00 63.08 N
ATOM 23 C4 A A 335 21.465 129.553 20.694 1.00 63.16 C
ATOM 24 P C A 336 25.915 125.214 20.342 1.00 55.34 P
ATOM 25 OP1 C A 336 26.330 123.814 20.073 1.00 53.41 O
ATOM 26 OP2 C A 336 26.936 126.220 20.721 1.00 55.58 O
ATOM 27 O5' C A 336 25.149 125.771 19.059 1.00 58.74 O
TER
ATOM 1 O3' A B 335 24.784 125.202 21.483 1.00 54.45 O
ATOM 2 P C B 336 25.915 125.214 20.342 1.00 55.34 P
ATOM 3 OP1 C B 336 26.330 123.814 20.073 1.00 53.41 O
ATOM 4 OP2 C B 336 26.936 126.220 20.721 1.00 55.58 O
ATOM 5 O5' C B 336 25.149 125.771 19.059 1.00 58.74 O
ATOM 6 C5' C B 336 24.016 125.070 18.508 1.00 60.54 C
ATOM 7 C4' C B 336 23.394 125.866 17.382 1.00 63.17 C
ATOM 8 O4' C B 336 22.768 127.070 17.897 1.00 64.40 O
ATOM 9 C3' C B 336 24.349 126.390 16.325 1.00 64.52 C
ATOM 10 O3' C B 336 24.711 125.387 15.393 1.00 66.32 O
ATOM 11 C2' C B 336 23.534 127.502 15.682 1.00 65.94 C
ATOM 12 O2' C B 336 22.586 127.031 14.750 1.00 69.06 O
ATOM 13 C1' C B 336 22.803 128.078 16.898 1.00 66.96 C
ATOM 14 N1 C B 336 23.479 129.274 17.427 1.00 69.72 N
ATOM 15 C2 C B 336 23.141 130.519 16.886 1.00 71.63 C
ATOM 16 O2 C B 336 22.252 130.578 16.020 1.00 73.58 O
ATOM 17 N3 C B 336 23.784 131.625 17.319 1.00 72.63 N
ATOM 18 C4 C B 336 24.722 131.525 18.261 1.00 72.70 C
ATOM 19 N4 C B 336 25.342 132.644 18.643 1.00 74.07 N
ATOM 20 C5 C B 336 25.069 130.273 18.849 1.00 71.33 C
ATOM 21 C6 C B 336 24.429 129.184 18.407 1.00 70.39 C
ATOM 22 P U B 337 26.212 125.335 14.827 1.00 69.59 P
ATOM 23 OP1 U B 337 26.361 124.116 13.997 1.00 69.62 O
ATOM 24 OP2 U B 337 27.132 125.557 15.973 1.00 70.80 O
ATOM 25 O5' U B 337 26.301 126.606 13.869 1.00 71.71 O
TER
ATOM 2 P A A 335 26.805 128.756 24.532 1.00 50.02 P
ATOM 3 OP1 A A 335 27.820 127.677 24.636 1.00 47.40 O
ATOM 4 OP2 A A 335 27.175 130.044 23.892 1.00 50.10 O
ATOM 5 O5' A A 335 25.537 128.144 23.782 1.00 52.62 O
ATOM 6 C5' A A 335 24.944 126.903 24.228 1.00 52.80 C
ATOM 7 C4' A A 335 23.811 126.490 23.314 1.00 54.49 C
ATOM 8 O4' A A 335 22.728 127.456 23.395 1.00 56.96 O
ATOM 9 C3' A A 335 24.127 126.416 21.831 1.00 54.83 C
ATOM 10 O3' A A 335 24.784 125.202 21.483 1.00 54.45 O
ATOM 11 C2' A A 335 22.743 126.537 21.206 1.00 55.95 C
ATOM 12 O2' A A 335 22.004 125.331 21.262 1.00 56.97 O
ATOM 13 C1' A A 335 22.086 127.560 22.133 1.00 57.24 C
ATOM 14 N9 A A 335 22.229 128.937 21.658 1.00 60.84 N
ATOM 15 C8 A A 335 23.142 129.882 22.070 1.00 62.14 C
ATOM 16 N7 A A 335 23.025 131.035 21.459 1.00 63.20 N
ATOM 17 C5 A A 335 21.965 130.840 20.583 1.00 64.03 C
ATOM 18 C6 A A 335 21.345 131.685 19.646 1.00 63.67 C
ATOM 19 N6 A A 335 21.711 132.952 19.437 1.00 63.25 N
ATOM 20 N1 A A 335 20.320 131.179 18.926 1.00 63.59 N
ATOM 21 C2 A A 335 19.946 129.914 19.145 1.00 62.43 C
ATOM 22 N3 A A 335 20.443 129.024 19.997 1.00 63.08 N
ATOM 23 C4 A A 335 21.465 129.553 20.694 1.00 63.16 C
ATOM 24 P C A 336 25.915 125.214 20.342 1.00 55.34 P
ATOM 25 OP1 C A 336 26.330 123.814 20.073 1.00 53.41 O
ATOM 26 OP2 C A 336 26.936 126.220 20.721 1.00 55.58 O
ATOM 27 O5' C A 336 25.149 125.771 19.059 1.00 58.74 O
TER
ATOM 1 O3' A B 335 24.784 125.202 21.483 1.00 54.45 O
ATOM 2 P C B 336 25.915 125.214 20.342 1.00 55.34 P
ATOM 3 OP1 C B 336 26.330 123.814 20.073 1.00 53.41 O
ATOM 4 OP2 C B 336 26.936 126.220 20.721 1.00 55.58 O
ATOM 5 O5' C B 336 25.149 125.771 19.059 1.00 58.74 O
ATOM 6 C5' C B 336 24.016 125.070 18.508 1.00 60.54 C
ATOM 7 C4' C B 336 23.394 125.866 17.382 1.00 63.17 C
ATOM 8 O4' C B 336 22.768 127.070 17.897 1.00 64.40 O
ATOM 9 C3' C B 336 24.349 126.390 16.325 1.00 64.52 C
ATOM 10 O3' C B 336 24.711 125.387 15.393 1.00 66.32 O
ATOM 11 C2' C B 336 23.534 127.502 15.682 1.00 65.94 C
ATOM 12 O2' C B 336 22.586 127.031 14.750 1.00 69.06 O
ATOM 13 C1' C B 336 22.803 128.078 16.898 1.00 66.96 C
ATOM 14 N1 C B 336 23.479 129.274 17.427 1.00 69.72 N
ATOM 15 C2 C B 336 23.141 130.519 16.886 1.00 71.63 C
ATOM 16 O2 C B 336 22.252 130.578 16.020 1.00 73.58 O
ATOM 17 N3 C B 336 23.784 131.625 17.319 1.00 72.63 N
ATOM 18 C4 C B 336 24.722 131.525 18.261 1.00 72.70 C
ATOM 19 N4 C B 336 25.342 132.644 18.643 1.00 74.07 N
ATOM 20 C5 C B 336 25.069 130.273 18.849 1.00 71.33 C
ATOM 21 C6 C B 336 24.429 129.184 18.407 1.00 70.39 C
ATOM 22 P U B 337 26.212 125.335 14.827 1.00 69.59 P
ATOM 23 OP1 U B 337 26.361 124.116 13.997 1.00 69.62 O
ATOM 24 OP2 U B 337 27.132 125.557 15.973 1.00 70.80 O
ATOM 25 O5' U B 337 26.301 126.606 13.869 1.00 71.71 O
TER
Atoms:
OP1: (27.820,127.677,24.636)
OP2: (27.175,130.044,23.892)
C3': (24.127,126.416,21.831)
C1': (22.086,127.560,22.133)
C5': (24.944,126.903,24.228)
O4': (22.728,127.456,23.395)
C8: (23.142,129.882,22.070)
O2': (22.004,125.331,21.262)
C6: (21.345,131.685,19.646)
C5: (21.965,130.840,20.583)
C4: (21.465,129.553,20.694)
P: (26.805,128.756,24.532)
C4': (23.811,126.490,23.314)
C2': (22.743,126.537,21.206)
C2: (19.946,129.914,19.145)
N1: (20.320,131.179,18.926)
N3: (20.443,129.024,19.997)
N6: (21.711,132.952,19.437)
N7: (23.025,131.035,21.459)
N9: (22.229,128.937,21.658)
O5': (25.537,128.144,23.782)
O3': (24.784,125.202,21.483)
OP2: (27.175,130.044,23.892)
C3': (24.127,126.416,21.831)
C1': (22.086,127.560,22.133)
C5': (24.944,126.903,24.228)
O4': (22.728,127.456,23.395)
C8: (23.142,129.882,22.070)
O2': (22.004,125.331,21.262)
C6: (21.345,131.685,19.646)
C5: (21.965,130.840,20.583)
C4: (21.465,129.553,20.694)
P: (26.805,128.756,24.532)
C4': (23.811,126.490,23.314)
C2': (22.743,126.537,21.206)
C2: (19.946,129.914,19.145)
N1: (20.320,131.179,18.926)
N3: (20.443,129.024,19.997)
N6: (21.711,132.952,19.437)
N7: (23.025,131.035,21.459)
N9: (22.229,128.937,21.658)
O5': (25.537,128.144,23.782)
O3': (24.784,125.202,21.483)
C2: (23.141,130.519,16.886)
OP1: (26.330,123.814,20.073)
OP2: (26.936,126.220,20.721)
C4: (24.722,131.525,18.261)
O5': (25.149,125.771,19.059)
C3': (24.349,126.390,16.325)
C1': (22.803,128.078,16.898)
O4': (22.768,127.070,17.897)
C5': (24.016,125.070,18.508)
P: (25.915,125.214,20.342)
O2: (22.252,130.578,16.020)
C4': (23.394,125.866,17.382)
C2': (23.534,127.502,15.682)
O2': (22.586,127.031,14.750)
N1: (23.479,129.274,17.427)
N3: (23.784,131.625,17.319)
N4: (25.342,132.644,18.643)
C6: (24.429,129.184,18.407)
C5: (25.069,130.273,18.849)
O3': (24.711,125.387,15.393)
OP1: (26.330,123.814,20.073)
OP2: (26.936,126.220,20.721)
C4: (24.722,131.525,18.261)
O5': (25.149,125.771,19.059)
C3': (24.349,126.390,16.325)
C1': (22.803,128.078,16.898)
O4': (22.768,127.070,17.897)
C5': (24.016,125.070,18.508)
P: (25.915,125.214,20.342)
O2: (22.252,130.578,16.020)
C4': (23.394,125.866,17.382)
C2': (23.534,127.502,15.682)
O2': (22.586,127.031,14.750)
N1: (23.479,129.274,17.427)
N3: (23.784,131.625,17.319)
N4: (25.342,132.644,18.643)
C6: (24.429,129.184,18.407)
C5: (25.069,130.273,18.849)
O3': (24.711,125.387,15.393)
Image (generated by PyMOL):