Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDH:R5:R7
Extra
PDB:
ATOM 1 O3' G A 4 27.619 98.582 27.465 0.60 49.92 O
ATOM 2 P A A 5 27.614 100.174 27.194 0.60 47.98 P
ATOM 3 OP1 A A 5 28.975 100.627 26.772 0.60 46.27 O
ATOM 4 OP2 A A 5 26.950 100.809 28.383 0.60 47.99 O
ATOM 5 O5' A A 5 26.665 100.314 25.924 0.60 48.87 O
ATOM 6 C5' A A 5 26.894 99.460 24.784 0.60 50.06 C
ATOM 7 C4' A A 5 25.791 99.612 23.778 0.60 50.52 C
ATOM 8 O4' A A 5 24.540 99.124 24.333 0.60 50.59 O
ATOM 9 C3' A A 5 25.516 101.048 23.386 0.60 50.12 C
ATOM 10 O3' A A 5 26.409 101.393 22.331 0.60 48.40 O
ATOM 11 C2' A A 5 24.049 101.016 22.965 0.60 49.93 C
ATOM 12 O2' A A 5 23.857 100.595 21.632 0.60 50.48 O
ATOM 13 C1' A A 5 23.468 99.937 23.890 0.60 50.04 C
ATOM 14 N9 A A 5 22.815 100.485 25.079 0.60 48.40 N
ATOM 15 C8 A A 5 23.293 100.523 26.366 0.60 48.44 C
ATOM 16 N7 A A 5 22.465 101.070 27.226 0.60 49.57 N
ATOM 17 C5 A A 5 21.377 101.422 26.454 0.60 48.91 C
ATOM 18 C6 A A 5 20.158 102.058 26.765 0.60 49.12 C
ATOM 19 N6 A A 5 19.864 102.487 28.001 0.60 49.94 N
ATOM 20 N1 A A 5 19.258 102.240 25.762 0.60 49.59 N
ATOM 21 C2 A A 5 19.590 101.831 24.523 0.60 49.06 C
ATOM 22 N3 A A 5 20.714 101.246 24.105 0.60 48.55 N
ATOM 23 C4 A A 5 21.563 101.069 25.124 0.60 48.21 C
ATOM 24 P U A 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 25 OP1 U A 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 26 OP2 U A 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 27 O5' U A 6 25.502 103.446 21.189 0.60 48.92 O
TER
ATOM 1 O3' U B 6 22.324 104.560 18.552 0.60 53.94 O
ATOM 2 P C B 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 3 OP1 C B 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 4 OP2 C B 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 5 O5' C B 7 20.719 105.080 20.438 0.60 54.41 O
ATOM 6 C5' C B 7 19.541 104.251 20.451 0.60 50.84 C
ATOM 7 C4' C B 7 18.742 104.530 21.695 0.60 47.35 C
ATOM 8 O4' C B 7 19.480 104.037 22.843 0.60 44.62 O
ATOM 9 C3' C B 7 18.466 106.007 21.944 0.60 46.72 C
ATOM 10 O3' C B 7 17.190 106.123 22.569 0.60 50.79 O
ATOM 11 C2' C B 7 19.562 106.406 22.937 0.60 44.74 C
ATOM 12 O2' C B 7 19.110 107.427 23.817 0.60 47.24 O
ATOM 13 C1' C B 7 19.800 105.105 23.708 0.60 41.80 C
ATOM 14 N1 C B 7 21.193 104.895 24.125 0.60 36.96 N
ATOM 15 C2 C B 7 21.556 105.136 25.462 0.60 35.60 C
ATOM 16 O2 C B 7 20.712 105.615 26.241 0.60 35.31 O
ATOM 17 N3 C B 7 22.820 104.856 25.866 0.60 34.27 N
ATOM 18 C4 C B 7 23.712 104.382 24.986 0.60 33.60 C
ATOM 19 N4 C B 7 24.942 104.109 25.427 0.60 32.20 N
ATOM 20 C5 C B 7 23.385 104.172 23.610 0.60 33.89 C
ATOM 21 C6 C B 7 22.122 104.439 23.232 0.60 34.92 C
ATOM 22 P A B 8 15.885 106.482 21.692 0.60 50.93 P
ATOM 23 OP1 A B 8 15.875 105.618 20.461 0.60 51.50 O
ATOM 24 OP2 A B 8 15.797 107.993 21.547 0.60 50.93 O
ATOM 25 O5' A B 8 14.696 106.015 22.654 0.60 49.67 O
TER
ATOM 2 P A A 5 27.614 100.174 27.194 0.60 47.98 P
ATOM 3 OP1 A A 5 28.975 100.627 26.772 0.60 46.27 O
ATOM 4 OP2 A A 5 26.950 100.809 28.383 0.60 47.99 O
ATOM 5 O5' A A 5 26.665 100.314 25.924 0.60 48.87 O
ATOM 6 C5' A A 5 26.894 99.460 24.784 0.60 50.06 C
ATOM 7 C4' A A 5 25.791 99.612 23.778 0.60 50.52 C
ATOM 8 O4' A A 5 24.540 99.124 24.333 0.60 50.59 O
ATOM 9 C3' A A 5 25.516 101.048 23.386 0.60 50.12 C
ATOM 10 O3' A A 5 26.409 101.393 22.331 0.60 48.40 O
ATOM 11 C2' A A 5 24.049 101.016 22.965 0.60 49.93 C
ATOM 12 O2' A A 5 23.857 100.595 21.632 0.60 50.48 O
ATOM 13 C1' A A 5 23.468 99.937 23.890 0.60 50.04 C
ATOM 14 N9 A A 5 22.815 100.485 25.079 0.60 48.40 N
ATOM 15 C8 A A 5 23.293 100.523 26.366 0.60 48.44 C
ATOM 16 N7 A A 5 22.465 101.070 27.226 0.60 49.57 N
ATOM 17 C5 A A 5 21.377 101.422 26.454 0.60 48.91 C
ATOM 18 C6 A A 5 20.158 102.058 26.765 0.60 49.12 C
ATOM 19 N6 A A 5 19.864 102.487 28.001 0.60 49.94 N
ATOM 20 N1 A A 5 19.258 102.240 25.762 0.60 49.59 N
ATOM 21 C2 A A 5 19.590 101.831 24.523 0.60 49.06 C
ATOM 22 N3 A A 5 20.714 101.246 24.105 0.60 48.55 N
ATOM 23 C4 A A 5 21.563 101.069 25.124 0.60 48.21 C
ATOM 24 P U A 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 25 OP1 U A 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 26 OP2 U A 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 27 O5' U A 6 25.502 103.446 21.189 0.60 48.92 O
TER
ATOM 1 O3' U B 6 22.324 104.560 18.552 0.60 53.94 O
ATOM 2 P C B 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 3 OP1 C B 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 4 OP2 C B 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 5 O5' C B 7 20.719 105.080 20.438 0.60 54.41 O
ATOM 6 C5' C B 7 19.541 104.251 20.451 0.60 50.84 C
ATOM 7 C4' C B 7 18.742 104.530 21.695 0.60 47.35 C
ATOM 8 O4' C B 7 19.480 104.037 22.843 0.60 44.62 O
ATOM 9 C3' C B 7 18.466 106.007 21.944 0.60 46.72 C
ATOM 10 O3' C B 7 17.190 106.123 22.569 0.60 50.79 O
ATOM 11 C2' C B 7 19.562 106.406 22.937 0.60 44.74 C
ATOM 12 O2' C B 7 19.110 107.427 23.817 0.60 47.24 O
ATOM 13 C1' C B 7 19.800 105.105 23.708 0.60 41.80 C
ATOM 14 N1 C B 7 21.193 104.895 24.125 0.60 36.96 N
ATOM 15 C2 C B 7 21.556 105.136 25.462 0.60 35.60 C
ATOM 16 O2 C B 7 20.712 105.615 26.241 0.60 35.31 O
ATOM 17 N3 C B 7 22.820 104.856 25.866 0.60 34.27 N
ATOM 18 C4 C B 7 23.712 104.382 24.986 0.60 33.60 C
ATOM 19 N4 C B 7 24.942 104.109 25.427 0.60 32.20 N
ATOM 20 C5 C B 7 23.385 104.172 23.610 0.60 33.89 C
ATOM 21 C6 C B 7 22.122 104.439 23.232 0.60 34.92 C
ATOM 22 P A B 8 15.885 106.482 21.692 0.60 50.93 P
ATOM 23 OP1 A B 8 15.875 105.618 20.461 0.60 51.50 O
ATOM 24 OP2 A B 8 15.797 107.993 21.547 0.60 50.93 O
ATOM 25 O5' A B 8 14.696 106.015 22.654 0.60 49.67 O
TER
Atoms:
OP1: (28.975,100.627,26.772)
OP2: (26.950,100.809,28.383)
C3': (25.516,101.048,23.386)
C1': (23.468,99.937,23.890)
C5': (26.894,99.460,24.784)
O4': (24.540,99.124,24.333)
C8: (23.293,100.523,26.366)
O2': (23.857,100.595,21.632)
C6: (20.158,102.058,26.765)
C5: (21.377,101.422,26.454)
C4: (21.563,101.069,25.124)
P: (27.614,100.174,27.194)
C4': (25.791,99.612,23.778)
C2': (24.049,101.016,22.965)
C2: (19.590,101.831,24.523)
N1: (19.258,102.240,25.762)
N3: (20.714,101.246,24.105)
N6: (19.864,102.487,28.001)
N7: (22.465,101.070,27.226)
N9: (22.815,100.485,25.079)
O5': (26.665,100.314,25.924)
O3': (26.409,101.393,22.331)
OP2: (26.950,100.809,28.383)
C3': (25.516,101.048,23.386)
C1': (23.468,99.937,23.890)
C5': (26.894,99.460,24.784)
O4': (24.540,99.124,24.333)
C8: (23.293,100.523,26.366)
O2': (23.857,100.595,21.632)
C6: (20.158,102.058,26.765)
C5: (21.377,101.422,26.454)
C4: (21.563,101.069,25.124)
P: (27.614,100.174,27.194)
C4': (25.791,99.612,23.778)
C2': (24.049,101.016,22.965)
C2: (19.590,101.831,24.523)
N1: (19.258,102.240,25.762)
N3: (20.714,101.246,24.105)
N6: (19.864,102.487,28.001)
N7: (22.465,101.070,27.226)
N9: (22.815,100.485,25.079)
O5': (26.665,100.314,25.924)
O3': (26.409,101.393,22.331)
C2: (21.556,105.136,25.462)
OP1: (20.119,105.711,18.083)
OP2: (22.002,106.970,19.366)
C4: (23.712,104.382,24.986)
O5': (20.719,105.080,20.438)
C3': (18.466,106.007,21.944)
C1': (19.800,105.105,23.708)
O4': (19.480,104.037,22.843)
C5': (19.541,104.251,20.451)
P: (21.271,105.687,19.065)
O2: (20.712,105.615,26.241)
C4': (18.742,104.530,21.695)
C2': (19.562,106.406,22.937)
O2': (19.110,107.427,23.817)
N1: (21.193,104.895,24.125)
N3: (22.820,104.856,25.866)
N4: (24.942,104.109,25.427)
C6: (22.122,104.439,23.232)
C5: (23.385,104.172,23.610)
O3': (17.190,106.123,22.569)
OP1: (20.119,105.711,18.083)
OP2: (22.002,106.970,19.366)
C4: (23.712,104.382,24.986)
O5': (20.719,105.080,20.438)
C3': (18.466,106.007,21.944)
C1': (19.800,105.105,23.708)
O4': (19.480,104.037,22.843)
C5': (19.541,104.251,20.451)
P: (21.271,105.687,19.065)
O2: (20.712,105.615,26.241)
C4': (18.742,104.530,21.695)
C2': (19.562,106.406,22.937)
O2': (19.110,107.427,23.817)
N1: (21.193,104.895,24.125)
N3: (22.820,104.856,25.866)
N4: (24.942,104.109,25.427)
C6: (22.122,104.439,23.232)
C5: (23.385,104.172,23.610)
O3': (17.190,106.123,22.569)
Image (generated by PyMOL):