Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YZ9:D3:D4
Extra
PDB:
ATOM 1 O3' A A 2 31.193 11.243 41.328 1.00 44.13 O
ATOM 2 P A A 3 32.576 11.666 42.034 1.00 52.26 P
ATOM 3 OP1 A A 3 33.668 11.050 41.241 1.00 51.53 O
ATOM 4 OP2 A A 3 32.489 11.397 43.490 1.00 45.98 O
ATOM 5 O5' A A 3 32.640 13.252 41.857 1.00 53.02 O
ATOM 6 C5' A A 3 32.701 13.840 40.561 1.00 49.41 C
ATOM 7 C4' A A 3 32.358 15.313 40.629 1.00 44.40 C
ATOM 8 O4' A A 3 31.019 15.471 41.184 1.00 50.23 O
ATOM 9 C3' A A 3 33.220 16.173 41.540 1.00 47.23 C
ATOM 10 O3' A A 3 34.455 16.544 40.926 1.00 38.35 O
ATOM 11 C2' A A 3 32.305 17.368 41.770 1.00 41.68 C
ATOM 12 O2' A A 3 32.225 18.206 40.634 1.00 45.68 O
ATOM 13 C1' A A 3 30.957 16.669 41.946 1.00 45.53 C
ATOM 14 N9 A A 3 30.706 16.322 43.343 1.00 41.36 N
ATOM 15 C8 A A 3 30.861 15.103 43.955 1.00 40.58 C
ATOM 16 N7 A A 3 30.570 15.114 45.236 1.00 41.47 N
ATOM 17 C5 A A 3 30.193 16.427 45.481 1.00 36.90 C
ATOM 18 C6 A A 3 29.774 17.087 46.646 1.00 37.93 C
ATOM 19 N6 A A 3 29.651 16.487 47.833 1.00 30.08 N
ATOM 20 N1 A A 3 29.483 18.404 46.553 1.00 31.94 N
ATOM 21 C2 A A 3 29.606 19.004 45.365 1.00 38.14 C
ATOM 22 N3 A A 3 29.989 18.491 44.198 1.00 41.41 N
ATOM 23 C4 A A 3 30.272 17.182 44.325 1.00 40.15 C
ATOM 24 P C A 4 35.665 17.096 41.839 1.00 44.17 P
ATOM 25 OP1 C A 4 36.848 17.269 40.962 1.00 48.60 O
ATOM 26 OP2 C A 4 35.771 16.264 43.063 1.00 48.55 O
ATOM 27 O5' C A 4 35.183 18.542 42.308 1.00 45.82 O
TER
ATOM 1 O3' A B 3 34.455 16.544 40.926 1.00 38.35 O
ATOM 2 P C B 4 35.665 17.096 41.839 1.00 44.17 P
ATOM 3 OP1 C B 4 36.848 17.269 40.962 1.00 48.60 O
ATOM 4 OP2 C B 4 35.771 16.264 43.063 1.00 48.55 O
ATOM 5 O5' C B 4 35.183 18.542 42.308 1.00 45.82 O
ATOM 6 C5' C B 4 34.941 19.572 41.353 1.00 43.61 C
ATOM 7 C4' C B 4 34.548 20.858 42.046 1.00 43.94 C
ATOM 8 O4' C B 4 33.277 20.686 42.731 1.00 34.92 O
ATOM 9 C3' C B 4 35.460 21.337 43.164 1.00 43.87 C
ATOM 10 O3' C B 4 36.638 21.953 42.655 1.00 49.62 O
ATOM 11 C2' C B 4 34.548 22.325 43.882 1.00 48.00 C
ATOM 12 O2' C B 4 34.431 23.557 43.193 1.00 42.37 O
ATOM 13 C1' C B 4 33.208 21.583 43.829 1.00 39.76 C
ATOM 14 N1 C B 4 32.960 20.811 45.056 1.00 43.65 N
ATOM 15 C2 C B 4 32.454 21.483 46.173 1.00 43.42 C
ATOM 16 O2 C B 4 32.188 22.693 46.077 1.00 41.25 O
ATOM 17 N3 C B 4 32.265 20.801 47.326 1.00 41.94 N
ATOM 18 C4 C B 4 32.550 19.498 47.386 1.00 36.20 C
ATOM 19 N4 C B 4 32.364 18.875 48.552 1.00 37.93 N
ATOM 20 C5 C B 4 33.044 18.782 46.256 1.00 36.53 C
ATOM 21 C6 C B 4 33.232 19.471 45.121 1.00 44.24 C
ATOM 22 P U B 5 38.037 21.772 43.439 1.00 49.73 P
ATOM 23 OP1 U B 5 39.081 22.425 42.612 1.00 51.60 O
ATOM 24 OP2 U B 5 38.197 20.348 43.827 1.00 51.40 O
ATOM 25 O5' U B 5 37.843 22.607 44.776 1.00 42.54 O
TER
ATOM 2 P A A 3 32.576 11.666 42.034 1.00 52.26 P
ATOM 3 OP1 A A 3 33.668 11.050 41.241 1.00 51.53 O
ATOM 4 OP2 A A 3 32.489 11.397 43.490 1.00 45.98 O
ATOM 5 O5' A A 3 32.640 13.252 41.857 1.00 53.02 O
ATOM 6 C5' A A 3 32.701 13.840 40.561 1.00 49.41 C
ATOM 7 C4' A A 3 32.358 15.313 40.629 1.00 44.40 C
ATOM 8 O4' A A 3 31.019 15.471 41.184 1.00 50.23 O
ATOM 9 C3' A A 3 33.220 16.173 41.540 1.00 47.23 C
ATOM 10 O3' A A 3 34.455 16.544 40.926 1.00 38.35 O
ATOM 11 C2' A A 3 32.305 17.368 41.770 1.00 41.68 C
ATOM 12 O2' A A 3 32.225 18.206 40.634 1.00 45.68 O
ATOM 13 C1' A A 3 30.957 16.669 41.946 1.00 45.53 C
ATOM 14 N9 A A 3 30.706 16.322 43.343 1.00 41.36 N
ATOM 15 C8 A A 3 30.861 15.103 43.955 1.00 40.58 C
ATOM 16 N7 A A 3 30.570 15.114 45.236 1.00 41.47 N
ATOM 17 C5 A A 3 30.193 16.427 45.481 1.00 36.90 C
ATOM 18 C6 A A 3 29.774 17.087 46.646 1.00 37.93 C
ATOM 19 N6 A A 3 29.651 16.487 47.833 1.00 30.08 N
ATOM 20 N1 A A 3 29.483 18.404 46.553 1.00 31.94 N
ATOM 21 C2 A A 3 29.606 19.004 45.365 1.00 38.14 C
ATOM 22 N3 A A 3 29.989 18.491 44.198 1.00 41.41 N
ATOM 23 C4 A A 3 30.272 17.182 44.325 1.00 40.15 C
ATOM 24 P C A 4 35.665 17.096 41.839 1.00 44.17 P
ATOM 25 OP1 C A 4 36.848 17.269 40.962 1.00 48.60 O
ATOM 26 OP2 C A 4 35.771 16.264 43.063 1.00 48.55 O
ATOM 27 O5' C A 4 35.183 18.542 42.308 1.00 45.82 O
TER
ATOM 1 O3' A B 3 34.455 16.544 40.926 1.00 38.35 O
ATOM 2 P C B 4 35.665 17.096 41.839 1.00 44.17 P
ATOM 3 OP1 C B 4 36.848 17.269 40.962 1.00 48.60 O
ATOM 4 OP2 C B 4 35.771 16.264 43.063 1.00 48.55 O
ATOM 5 O5' C B 4 35.183 18.542 42.308 1.00 45.82 O
ATOM 6 C5' C B 4 34.941 19.572 41.353 1.00 43.61 C
ATOM 7 C4' C B 4 34.548 20.858 42.046 1.00 43.94 C
ATOM 8 O4' C B 4 33.277 20.686 42.731 1.00 34.92 O
ATOM 9 C3' C B 4 35.460 21.337 43.164 1.00 43.87 C
ATOM 10 O3' C B 4 36.638 21.953 42.655 1.00 49.62 O
ATOM 11 C2' C B 4 34.548 22.325 43.882 1.00 48.00 C
ATOM 12 O2' C B 4 34.431 23.557 43.193 1.00 42.37 O
ATOM 13 C1' C B 4 33.208 21.583 43.829 1.00 39.76 C
ATOM 14 N1 C B 4 32.960 20.811 45.056 1.00 43.65 N
ATOM 15 C2 C B 4 32.454 21.483 46.173 1.00 43.42 C
ATOM 16 O2 C B 4 32.188 22.693 46.077 1.00 41.25 O
ATOM 17 N3 C B 4 32.265 20.801 47.326 1.00 41.94 N
ATOM 18 C4 C B 4 32.550 19.498 47.386 1.00 36.20 C
ATOM 19 N4 C B 4 32.364 18.875 48.552 1.00 37.93 N
ATOM 20 C5 C B 4 33.044 18.782 46.256 1.00 36.53 C
ATOM 21 C6 C B 4 33.232 19.471 45.121 1.00 44.24 C
ATOM 22 P U B 5 38.037 21.772 43.439 1.00 49.73 P
ATOM 23 OP1 U B 5 39.081 22.425 42.612 1.00 51.60 O
ATOM 24 OP2 U B 5 38.197 20.348 43.827 1.00 51.40 O
ATOM 25 O5' U B 5 37.843 22.607 44.776 1.00 42.54 O
TER
Atoms:
OP1: (33.668,11.050,41.241)
OP2: (32.489,11.397,43.490)
C3': (33.220,16.173,41.540)
C1': (30.957,16.669,41.946)
C5': (32.701,13.840,40.561)
O4': (31.019,15.471,41.184)
C8: (30.861,15.103,43.955)
O2': (32.225,18.206,40.634)
C6: (29.774,17.087,46.646)
C5: (30.193,16.427,45.481)
C4: (30.272,17.182,44.325)
P: (32.576,11.666,42.034)
C4': (32.358,15.313,40.629)
C2': (32.305,17.368,41.770)
C2: (29.606,19.004,45.365)
N1: (29.483,18.404,46.553)
N3: (29.989,18.491,44.198)
N6: (29.651,16.487,47.833)
N7: (30.570,15.114,45.236)
N9: (30.706,16.322,43.343)
O5': (32.640,13.252,41.857)
O3': (34.455,16.544,40.926)
OP2: (32.489,11.397,43.490)
C3': (33.220,16.173,41.540)
C1': (30.957,16.669,41.946)
C5': (32.701,13.840,40.561)
O4': (31.019,15.471,41.184)
C8: (30.861,15.103,43.955)
O2': (32.225,18.206,40.634)
C6: (29.774,17.087,46.646)
C5: (30.193,16.427,45.481)
C4: (30.272,17.182,44.325)
P: (32.576,11.666,42.034)
C4': (32.358,15.313,40.629)
C2': (32.305,17.368,41.770)
C2: (29.606,19.004,45.365)
N1: (29.483,18.404,46.553)
N3: (29.989,18.491,44.198)
N6: (29.651,16.487,47.833)
N7: (30.570,15.114,45.236)
N9: (30.706,16.322,43.343)
O5': (32.640,13.252,41.857)
O3': (34.455,16.544,40.926)
C2: (32.454,21.483,46.173)
OP1: (36.848,17.269,40.962)
OP2: (35.771,16.264,43.063)
C4: (32.550,19.498,47.386)
O5': (35.183,18.542,42.308)
C3': (35.460,21.337,43.164)
C1': (33.208,21.583,43.829)
O4': (33.277,20.686,42.731)
C5': (34.941,19.572,41.353)
P: (35.665,17.096,41.839)
O2: (32.188,22.693,46.077)
C4': (34.548,20.858,42.046)
C2': (34.548,22.325,43.882)
O2': (34.431,23.557,43.193)
N1: (32.960,20.811,45.056)
N3: (32.265,20.801,47.326)
N4: (32.364,18.875,48.552)
C6: (33.232,19.471,45.121)
C5: (33.044,18.782,46.256)
O3': (36.638,21.953,42.655)
OP1: (36.848,17.269,40.962)
OP2: (35.771,16.264,43.063)
C4: (32.550,19.498,47.386)
O5': (35.183,18.542,42.308)
C3': (35.460,21.337,43.164)
C1': (33.208,21.583,43.829)
O4': (33.277,20.686,42.731)
C5': (34.941,19.572,41.353)
P: (35.665,17.096,41.839)
O2: (32.188,22.693,46.077)
C4': (34.548,20.858,42.046)
C2': (34.548,22.325,43.882)
O2': (34.431,23.557,43.193)
N1: (32.960,20.811,45.056)
N3: (32.265,20.801,47.326)
N4: (32.364,18.875,48.552)
C6: (33.232,19.471,45.121)
C5: (33.044,18.782,46.256)
O3': (36.638,21.953,42.655)
Image (generated by PyMOL):