ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1T0E:C13:C14

Extra

PDB:
ATOM 1 O3' C A 12 0.292 -6.872 10.896 1.00 40.00 O
ATOM 2 P A A 13 -0.398 -6.821 9.465 1.00 40.44 P
ATOM 3 OP1 A A 13 0.642 -7.495 8.654 1.00 41.61 O
ATOM 4 OP2 A A 13 -1.047 -5.551 8.956 1.00 37.87 O
ATOM 5 O5' A A 13 -1.534 -7.941 9.606 1.00 38.77 O
ATOM 6 C5' A A 13 -1.128 -9.278 9.843 1.00 36.36 C
ATOM 7 C4' A A 13 -2.346 -10.124 10.041 1.00 36.51 C
ATOM 8 O4' A A 13 -2.991 -9.769 11.305 1.00 36.09 O
ATOM 9 C3' A A 13 -3.400 -9.802 9.021 1.00 35.14 C
ATOM 10 O3' A A 13 -3.075 -10.585 7.890 1.00 36.57 O
ATOM 11 C2' A A 13 -4.663 -10.299 9.693 1.00 35.50 C
ATOM 12 O2' A A 13 -4.859 -11.708 9.726 1.00 35.08 O
ATOM 13 C1' A A 13 -4.416 -9.820 11.113 1.00 33.98 C
ATOM 14 N9 A A 13 -4.920 -8.458 11.205 1.00 32.34 N
ATOM 15 C8 A A 13 -4.246 -7.280 11.072 1.00 30.38 C
ATOM 16 N7 A A 13 -5.013 -6.235 11.179 1.00 30.43 N
ATOM 17 C5 A A 13 -6.281 -6.769 11.444 1.00 28.26 C
ATOM 18 C6 A A 13 -7.538 -6.152 11.692 1.00 25.54 C
ATOM 19 N6 A A 13 -7.721 -4.857 11.745 1.00 22.67 N
ATOM 20 N1 A A 13 -8.601 -6.943 11.879 1.00 24.40 N
ATOM 21 C2 A A 13 -8.413 -8.268 11.837 1.00 26.66 C
ATOM 22 N3 A A 13 -7.270 -8.980 11.625 1.00 28.52 N
ATOM 23 C4 A A 13 -6.234 -8.135 11.443 1.00 29.57 C
ATOM 24 P C A 14 -3.647 -10.159 6.478 1.00 32.53 P
ATOM 25 OP1 C A 14 -3.179 -11.140 5.465 1.00 38.33 O
ATOM 26 OP2 C A 14 -3.711 -8.718 6.165 1.00 36.14 O
ATOM 27 O5' C A 14 -5.177 -10.576 6.794 1.00 33.93 O
TER

ATOM 1 O3' A B 13 -3.075 -10.585 7.890 1.00 36.57 O
ATOM 2 P C B 14 -3.647 -10.159 6.478 1.00 32.53 P
ATOM 3 OP1 C B 14 -3.179 -11.140 5.465 1.00 38.33 O
ATOM 4 OP2 C B 14 -3.711 -8.718 6.165 1.00 36.14 O
ATOM 5 O5' C B 14 -5.177 -10.576 6.794 1.00 33.93 O
ATOM 6 C5' C B 14 -6.179 -10.321 5.934 1.00 29.88 C
ATOM 7 C4' C B 14 -7.501 -10.718 6.622 1.00 26.51 C
ATOM 8 O4' C B 14 -7.549 -10.232 7.989 1.00 26.39 O
ATOM 9 C3' C B 14 -8.509 -9.935 5.923 1.00 26.01 C
ATOM 10 O3' C B 14 -8.952 -10.842 4.942 1.00 25.81 O
ATOM 11 C2' C B 14 -9.578 -9.702 6.940 1.00 24.76 C
ATOM 12 O2' C B 14 -10.373 -10.855 7.106 1.00 24.34 O
ATOM 13 C1' C B 14 -8.744 -9.465 8.168 1.00 24.79 C
ATOM 14 N1 C B 14 -8.463 -8.043 8.238 1.00 23.95 N
ATOM 15 C2 C B 14 -9.478 -7.227 8.729 1.00 22.28 C
ATOM 16 O2 C B 14 -10.484 -7.794 9.160 1.00 21.74 O
ATOM 17 N3 C B 14 -9.331 -5.852 8.760 1.00 22.99 N
ATOM 18 C4 C B 14 -8.133 -5.327 8.472 1.00 24.54 C
ATOM 19 N4 C B 14 -7.928 -3.985 8.684 1.00 24.88 N
ATOM 20 C5 C B 14 -7.051 -6.151 7.996 1.00 25.60 C
ATOM 21 C6 C B 14 -7.277 -7.507 7.842 1.00 24.51 C
ATOM 22 P C B 15 -9.374 -10.294 3.632 1.00 27.55 P
ATOM 23 OP1 C B 15 -9.355 -11.535 2.773 1.00 29.71 O
ATOM 24 OP2 C B 15 -8.513 -9.082 3.250 1.00 27.12 O
ATOM 25 O5' C B 15 -10.846 -9.714 3.782 1.00 24.32 O
TER

Atoms:
OP1: (0.642,-7.495,8.654)
OP2: (-1.047,-5.551,8.956)
C3': (-3.400,-9.802,9.021)
C1': (-4.416,-9.820,11.113)
C5': (-1.128,-9.278,9.843)
O4': (-2.991,-9.769,11.305)
C8: (-4.246,-7.280,11.072)
O2': (-4.859,-11.708,9.726)
C6: (-7.538,-6.152,11.692)
C5: (-6.281,-6.769,11.444)
C4: (-6.234,-8.135,11.443)
P: (-0.398,-6.821,9.465)
C4': (-2.346,-10.124,10.041)
C2': (-4.663,-10.299,9.693)
C2: (-8.413,-8.268,11.837)
N1: (-8.601,-6.943,11.879)
N3: (-7.270,-8.980,11.625)
N6: (-7.721,-4.857,11.745)
N7: (-5.013,-6.235,11.179)
N9: (-4.920,-8.458,11.205)
O5': (-1.534,-7.941,9.606)
O3': (-3.075,-10.585,7.890)
C2: (-9.478,-7.227,8.729)
OP1: (-3.179,-11.140,5.465)
OP2: (-3.711,-8.718,6.165)
C4: (-8.133,-5.327,8.472)
O5': (-5.177,-10.576,6.794)
C3': (-8.509,-9.935,5.923)
C1': (-8.744,-9.465,8.168)
O4': (-7.549,-10.232,7.989)
C5': (-6.179,-10.321,5.934)
P: (-3.647,-10.159,6.478)
O2: (-10.484,-7.794,9.160)
C4': (-7.501,-10.718,6.622)
C2': (-9.578,-9.702,6.940)
O2': (-10.373,-10.855,7.106)
N1: (-8.463,-8.043,8.238)
N3: (-9.331,-5.852,8.760)
N4: (-7.928,-3.985,8.684)
C6: (-7.277,-7.507,7.842)
C5: (-7.051,-6.151,7.996)
O3': (-8.952,-10.842,4.942)
Image (generated by PyMOL):
PyMOL image
show in jmol