Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A977:A978
Extra
PDB:
ATOM 1 O3' U A 976 43.832 68.231 91.941 1.00 41.19 O
ATOM 2 P A A 977 42.653 67.604 91.062 1.00 40.67 P
ATOM 3 OP1 A A 977 42.587 68.424 89.813 1.00 42.28 O
ATOM 4 OP2 A A 977 41.471 67.523 91.954 1.00 39.02 O
ATOM 5 O5' A A 977 43.195 66.151 90.671 1.00 42.30 O
ATOM 6 C5' A A 977 44.235 66.020 89.662 1.00 44.30 C
ATOM 7 C4' A A 977 44.374 64.600 89.163 1.00 44.55 C
ATOM 8 O4' A A 977 44.875 63.754 90.215 1.00 45.72 O
ATOM 9 C3' A A 977 43.129 63.911 88.647 1.00 44.81 C
ATOM 10 O3' A A 977 42.915 64.253 87.290 1.00 45.13 O
ATOM 11 C2' A A 977 43.485 62.442 88.820 1.00 46.30 C
ATOM 12 O2' A A 977 44.330 61.904 87.824 1.00 48.43 O
ATOM 13 C1' A A 977 44.265 62.481 90.130 1.00 47.07 C
ATOM 14 N9 A A 977 43.363 62.346 91.266 1.00 48.26 N
ATOM 15 C8 A A 977 42.854 63.345 92.056 1.00 49.28 C
ATOM 16 N7 A A 977 42.039 62.919 92.983 1.00 49.40 N
ATOM 17 C5 A A 977 42.014 61.548 92.794 1.00 49.88 C
ATOM 18 C6 A A 977 41.324 60.522 93.447 1.00 50.35 C
ATOM 19 N6 A A 977 40.483 60.731 94.465 1.00 50.25 N
ATOM 20 N1 A A 977 41.521 59.256 93.011 1.00 50.53 N
ATOM 21 C2 A A 977 42.350 59.057 91.975 1.00 50.17 C
ATOM 22 N3 A A 977 43.045 59.942 91.278 1.00 50.18 N
ATOM 23 C4 A A 977 42.831 61.182 91.745 1.00 49.16 C
ATOM 24 P C A 978 41.426 64.505 86.753 1.00 44.70 P
ATOM 25 OP1 C A 978 41.576 64.962 85.348 1.00 44.52 O
ATOM 26 OP2 C A 978 40.722 65.379 87.714 1.00 43.08 O
ATOM 27 O5' C A 978 40.791 63.036 86.774 1.00 44.90 O
TER
ATOM 1 O3' A B 977 42.915 64.253 87.290 1.00 45.13 O
ATOM 2 P C B 978 41.426 64.505 86.753 1.00 44.70 P
ATOM 3 OP1 C B 978 41.576 64.962 85.348 1.00 44.52 O
ATOM 4 OP2 C B 978 40.722 65.379 87.714 1.00 43.08 O
ATOM 5 O5' C B 978 40.791 63.036 86.774 1.00 44.90 O
ATOM 6 C5' C B 978 41.399 61.958 86.024 1.00 46.58 C
ATOM 7 C4' C B 978 40.824 60.610 86.416 1.00 50.65 C
ATOM 8 O4' C B 978 41.190 60.282 87.779 1.00 50.90 O
ATOM 9 C3' C B 978 39.317 60.435 86.404 1.00 52.29 C
ATOM 10 O3' C B 978 38.756 60.204 85.129 1.00 55.04 O
ATOM 11 C2' C B 978 39.129 59.207 87.274 1.00 53.13 C
ATOM 12 O2' C B 978 39.370 58.001 86.577 1.00 53.47 O
ATOM 13 C1' C B 978 40.187 59.451 88.351 1.00 52.24 C
ATOM 14 N1 C B 978 39.608 60.135 89.523 1.00 51.15 N
ATOM 15 C2 C B 978 39.082 59.355 90.565 1.00 51.28 C
ATOM 16 O2 C B 978 39.076 58.118 90.454 1.00 51.57 O
ATOM 17 N3 C B 978 38.576 59.970 91.657 1.00 51.45 N
ATOM 18 C4 C B 978 38.559 61.300 91.726 1.00 50.93 C
ATOM 19 N4 C B 978 38.060 61.851 92.831 1.00 51.62 N
ATOM 20 C5 C B 978 39.057 62.118 90.669 1.00 49.77 C
ATOM 21 C6 C B 978 39.574 61.501 89.601 1.00 49.51 C
ATOM 22 P A B 979 37.234 60.630 84.866 1.00 57.33 P
ATOM 23 OP1 A B 979 36.985 60.425 83.424 1.00 56.63 O
ATOM 24 OP2 A B 979 37.051 61.979 85.459 1.00 57.39 O
ATOM 25 O5' A B 979 36.368 59.586 85.718 1.00 57.92 O
TER
ATOM 2 P A A 977 42.653 67.604 91.062 1.00 40.67 P
ATOM 3 OP1 A A 977 42.587 68.424 89.813 1.00 42.28 O
ATOM 4 OP2 A A 977 41.471 67.523 91.954 1.00 39.02 O
ATOM 5 O5' A A 977 43.195 66.151 90.671 1.00 42.30 O
ATOM 6 C5' A A 977 44.235 66.020 89.662 1.00 44.30 C
ATOM 7 C4' A A 977 44.374 64.600 89.163 1.00 44.55 C
ATOM 8 O4' A A 977 44.875 63.754 90.215 1.00 45.72 O
ATOM 9 C3' A A 977 43.129 63.911 88.647 1.00 44.81 C
ATOM 10 O3' A A 977 42.915 64.253 87.290 1.00 45.13 O
ATOM 11 C2' A A 977 43.485 62.442 88.820 1.00 46.30 C
ATOM 12 O2' A A 977 44.330 61.904 87.824 1.00 48.43 O
ATOM 13 C1' A A 977 44.265 62.481 90.130 1.00 47.07 C
ATOM 14 N9 A A 977 43.363 62.346 91.266 1.00 48.26 N
ATOM 15 C8 A A 977 42.854 63.345 92.056 1.00 49.28 C
ATOM 16 N7 A A 977 42.039 62.919 92.983 1.00 49.40 N
ATOM 17 C5 A A 977 42.014 61.548 92.794 1.00 49.88 C
ATOM 18 C6 A A 977 41.324 60.522 93.447 1.00 50.35 C
ATOM 19 N6 A A 977 40.483 60.731 94.465 1.00 50.25 N
ATOM 20 N1 A A 977 41.521 59.256 93.011 1.00 50.53 N
ATOM 21 C2 A A 977 42.350 59.057 91.975 1.00 50.17 C
ATOM 22 N3 A A 977 43.045 59.942 91.278 1.00 50.18 N
ATOM 23 C4 A A 977 42.831 61.182 91.745 1.00 49.16 C
ATOM 24 P C A 978 41.426 64.505 86.753 1.00 44.70 P
ATOM 25 OP1 C A 978 41.576 64.962 85.348 1.00 44.52 O
ATOM 26 OP2 C A 978 40.722 65.379 87.714 1.00 43.08 O
ATOM 27 O5' C A 978 40.791 63.036 86.774 1.00 44.90 O
TER
ATOM 1 O3' A B 977 42.915 64.253 87.290 1.00 45.13 O
ATOM 2 P C B 978 41.426 64.505 86.753 1.00 44.70 P
ATOM 3 OP1 C B 978 41.576 64.962 85.348 1.00 44.52 O
ATOM 4 OP2 C B 978 40.722 65.379 87.714 1.00 43.08 O
ATOM 5 O5' C B 978 40.791 63.036 86.774 1.00 44.90 O
ATOM 6 C5' C B 978 41.399 61.958 86.024 1.00 46.58 C
ATOM 7 C4' C B 978 40.824 60.610 86.416 1.00 50.65 C
ATOM 8 O4' C B 978 41.190 60.282 87.779 1.00 50.90 O
ATOM 9 C3' C B 978 39.317 60.435 86.404 1.00 52.29 C
ATOM 10 O3' C B 978 38.756 60.204 85.129 1.00 55.04 O
ATOM 11 C2' C B 978 39.129 59.207 87.274 1.00 53.13 C
ATOM 12 O2' C B 978 39.370 58.001 86.577 1.00 53.47 O
ATOM 13 C1' C B 978 40.187 59.451 88.351 1.00 52.24 C
ATOM 14 N1 C B 978 39.608 60.135 89.523 1.00 51.15 N
ATOM 15 C2 C B 978 39.082 59.355 90.565 1.00 51.28 C
ATOM 16 O2 C B 978 39.076 58.118 90.454 1.00 51.57 O
ATOM 17 N3 C B 978 38.576 59.970 91.657 1.00 51.45 N
ATOM 18 C4 C B 978 38.559 61.300 91.726 1.00 50.93 C
ATOM 19 N4 C B 978 38.060 61.851 92.831 1.00 51.62 N
ATOM 20 C5 C B 978 39.057 62.118 90.669 1.00 49.77 C
ATOM 21 C6 C B 978 39.574 61.501 89.601 1.00 49.51 C
ATOM 22 P A B 979 37.234 60.630 84.866 1.00 57.33 P
ATOM 23 OP1 A B 979 36.985 60.425 83.424 1.00 56.63 O
ATOM 24 OP2 A B 979 37.051 61.979 85.459 1.00 57.39 O
ATOM 25 O5' A B 979 36.368 59.586 85.718 1.00 57.92 O
TER
Atoms:
OP1: (42.587,68.424,89.813)
OP2: (41.471,67.523,91.954)
C3': (43.129,63.911,88.647)
C1': (44.265,62.481,90.130)
C5': (44.235,66.020,89.662)
O4': (44.875,63.754,90.215)
C8: (42.854,63.345,92.056)
O2': (44.330,61.904,87.824)
C6: (41.324,60.522,93.447)
C5: (42.014,61.548,92.794)
C4: (42.831,61.182,91.745)
P: (42.653,67.604,91.062)
C4': (44.374,64.600,89.163)
C2': (43.485,62.442,88.820)
C2: (42.350,59.057,91.975)
N1: (41.521,59.256,93.011)
N3: (43.045,59.942,91.278)
N6: (40.483,60.731,94.465)
N7: (42.039,62.919,92.983)
N9: (43.363,62.346,91.266)
O5': (43.195,66.151,90.671)
O3': (42.915,64.253,87.290)
OP2: (41.471,67.523,91.954)
C3': (43.129,63.911,88.647)
C1': (44.265,62.481,90.130)
C5': (44.235,66.020,89.662)
O4': (44.875,63.754,90.215)
C8: (42.854,63.345,92.056)
O2': (44.330,61.904,87.824)
C6: (41.324,60.522,93.447)
C5: (42.014,61.548,92.794)
C4: (42.831,61.182,91.745)
P: (42.653,67.604,91.062)
C4': (44.374,64.600,89.163)
C2': (43.485,62.442,88.820)
C2: (42.350,59.057,91.975)
N1: (41.521,59.256,93.011)
N3: (43.045,59.942,91.278)
N6: (40.483,60.731,94.465)
N7: (42.039,62.919,92.983)
N9: (43.363,62.346,91.266)
O5': (43.195,66.151,90.671)
O3': (42.915,64.253,87.290)
C2: (39.082,59.355,90.565)
OP1: (41.576,64.962,85.348)
OP2: (40.722,65.379,87.714)
C4: (38.559,61.300,91.726)
O5': (40.791,63.036,86.774)
C3': (39.317,60.435,86.404)
C1': (40.187,59.451,88.351)
O4': (41.190,60.282,87.779)
C5': (41.399,61.958,86.024)
P: (41.426,64.505,86.753)
O2: (39.076,58.118,90.454)
C4': (40.824,60.610,86.416)
C2': (39.129,59.207,87.274)
O2': (39.370,58.001,86.577)
N1: (39.608,60.135,89.523)
N3: (38.576,59.970,91.657)
N4: (38.060,61.851,92.831)
C6: (39.574,61.501,89.601)
C5: (39.057,62.118,90.669)
O3': (38.756,60.204,85.129)
OP1: (41.576,64.962,85.348)
OP2: (40.722,65.379,87.714)
C4: (38.559,61.300,91.726)
O5': (40.791,63.036,86.774)
C3': (39.317,60.435,86.404)
C1': (40.187,59.451,88.351)
O4': (41.190,60.282,87.779)
C5': (41.399,61.958,86.024)
P: (41.426,64.505,86.753)
O2: (39.076,58.118,90.454)
C4': (40.824,60.610,86.416)
C2': (39.129,59.207,87.274)
O2': (39.370,58.001,86.577)
N1: (39.608,60.135,89.523)
N3: (38.576,59.970,91.657)
N4: (38.060,61.851,92.831)
C6: (39.574,61.501,89.601)
C5: (39.057,62.118,90.669)
O3': (38.756,60.204,85.129)
Image (generated by PyMOL):