Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:01233:01234
Extra
PDB:
ATOM 1 O3' C A1232 10.001 79.209 71.052 1.00 43.52 O
ATOM 2 P A A1233 9.539 79.306 69.518 1.00 45.35 P
ATOM 3 OP1 A A1233 9.498 77.912 69.006 1.00 44.11 O
ATOM 4 OP2 A A1233 10.351 80.325 68.798 1.00 44.60 O
ATOM 5 O5' A A1233 8.051 79.866 69.621 1.00 45.27 O
ATOM 6 C5' A A1233 7.000 79.062 70.185 1.00 44.04 C
ATOM 7 C4' A A1233 5.680 79.788 70.098 1.00 44.64 C
ATOM 8 O4' A A1233 5.676 80.931 70.989 1.00 44.32 O
ATOM 9 C3' A A1233 5.333 80.393 68.750 1.00 45.18 C
ATOM 10 O3' A A1233 4.862 79.414 67.840 1.00 45.16 O
ATOM 11 C2' A A1233 4.271 81.415 69.131 1.00 45.34 C
ATOM 12 O2' A A1233 3.004 80.842 69.383 1.00 45.88 O
ATOM 13 C1' A A1233 4.838 81.946 70.450 1.00 45.97 C
ATOM 14 N9 A A1233 5.628 83.166 70.274 1.00 46.60 N
ATOM 15 C8 A A1233 6.985 83.286 70.075 1.00 47.43 C
ATOM 16 N7 A A1233 7.393 84.525 69.945 1.00 47.58 N
ATOM 17 C5 A A1233 6.229 85.273 70.067 1.00 46.82 C
ATOM 18 C6 A A1233 5.985 86.656 70.012 1.00 46.51 C
ATOM 19 N6 A A1233 6.937 87.568 69.811 1.00 46.57 N
ATOM 20 N1 A A1233 4.709 87.075 70.167 1.00 47.32 N
ATOM 21 C2 A A1233 3.751 86.158 70.357 1.00 46.66 C
ATOM 22 N3 A A1233 3.856 84.832 70.425 1.00 46.87 N
ATOM 23 C4 A A1233 5.135 84.449 70.271 1.00 46.37 C
ATOM 24 P C A1234 5.195 79.558 66.280 1.00 46.64 P
ATOM 25 OP1 C A1234 4.593 78.385 65.599 1.00 47.63 O
ATOM 26 OP2 C A1234 6.648 79.821 66.120 1.00 47.78 O
ATOM 27 O5' C A1234 4.392 80.867 65.858 1.00 44.28 O
TER
ATOM 1 O3' A B1233 4.862 79.414 67.840 1.00 45.16 O
ATOM 2 P C B1234 5.195 79.558 66.280 1.00 46.64 P
ATOM 3 OP1 C B1234 4.593 78.385 65.599 1.00 47.63 O
ATOM 4 OP2 C B1234 6.648 79.821 66.120 1.00 47.78 O
ATOM 5 O5' C B1234 4.392 80.867 65.858 1.00 44.28 O
ATOM 6 C5' C B1234 2.962 80.875 65.870 1.00 43.33 C
ATOM 7 C4' C B1234 2.435 82.244 65.516 1.00 44.97 C
ATOM 8 O4' C B1234 2.715 83.183 66.586 1.00 44.84 O
ATOM 9 C3' C B1234 3.038 82.904 64.290 1.00 45.64 C
ATOM 10 O3' C B1234 2.507 82.391 63.076 1.00 46.20 O
ATOM 11 C2' C B1234 2.684 84.364 64.527 1.00 46.63 C
ATOM 12 O2' C B1234 1.339 84.663 64.215 1.00 48.42 O
ATOM 13 C1' C B1234 2.907 84.480 66.039 1.00 47.05 C
ATOM 14 N1 C B1234 4.281 84.928 66.347 1.00 47.98 N
ATOM 15 C2 C B1234 4.545 86.302 66.416 1.00 48.49 C
ATOM 16 O2 C B1234 3.606 87.105 66.291 1.00 49.70 O
ATOM 17 N3 C B1234 5.816 86.718 66.621 1.00 49.41 N
ATOM 18 C4 C B1234 6.795 85.825 66.775 1.00 48.30 C
ATOM 19 N4 C B1234 8.034 86.279 66.962 1.00 49.37 N
ATOM 20 C5 C B1234 6.549 84.425 66.744 1.00 48.16 C
ATOM 21 C6 C B1234 5.292 84.024 66.532 1.00 48.35 C
ATOM 22 P U B1235 3.477 82.188 61.810 1.00 48.04 P
ATOM 23 OP1 U B1235 2.666 81.682 60.674 1.00 47.82 O
ATOM 24 OP2 U B1235 4.655 81.410 62.260 1.00 47.08 O
ATOM 25 O5' U B1235 3.954 83.674 61.473 1.00 47.71 O
TER
ATOM 2 P A A1233 9.539 79.306 69.518 1.00 45.35 P
ATOM 3 OP1 A A1233 9.498 77.912 69.006 1.00 44.11 O
ATOM 4 OP2 A A1233 10.351 80.325 68.798 1.00 44.60 O
ATOM 5 O5' A A1233 8.051 79.866 69.621 1.00 45.27 O
ATOM 6 C5' A A1233 7.000 79.062 70.185 1.00 44.04 C
ATOM 7 C4' A A1233 5.680 79.788 70.098 1.00 44.64 C
ATOM 8 O4' A A1233 5.676 80.931 70.989 1.00 44.32 O
ATOM 9 C3' A A1233 5.333 80.393 68.750 1.00 45.18 C
ATOM 10 O3' A A1233 4.862 79.414 67.840 1.00 45.16 O
ATOM 11 C2' A A1233 4.271 81.415 69.131 1.00 45.34 C
ATOM 12 O2' A A1233 3.004 80.842 69.383 1.00 45.88 O
ATOM 13 C1' A A1233 4.838 81.946 70.450 1.00 45.97 C
ATOM 14 N9 A A1233 5.628 83.166 70.274 1.00 46.60 N
ATOM 15 C8 A A1233 6.985 83.286 70.075 1.00 47.43 C
ATOM 16 N7 A A1233 7.393 84.525 69.945 1.00 47.58 N
ATOM 17 C5 A A1233 6.229 85.273 70.067 1.00 46.82 C
ATOM 18 C6 A A1233 5.985 86.656 70.012 1.00 46.51 C
ATOM 19 N6 A A1233 6.937 87.568 69.811 1.00 46.57 N
ATOM 20 N1 A A1233 4.709 87.075 70.167 1.00 47.32 N
ATOM 21 C2 A A1233 3.751 86.158 70.357 1.00 46.66 C
ATOM 22 N3 A A1233 3.856 84.832 70.425 1.00 46.87 N
ATOM 23 C4 A A1233 5.135 84.449 70.271 1.00 46.37 C
ATOM 24 P C A1234 5.195 79.558 66.280 1.00 46.64 P
ATOM 25 OP1 C A1234 4.593 78.385 65.599 1.00 47.63 O
ATOM 26 OP2 C A1234 6.648 79.821 66.120 1.00 47.78 O
ATOM 27 O5' C A1234 4.392 80.867 65.858 1.00 44.28 O
TER
ATOM 1 O3' A B1233 4.862 79.414 67.840 1.00 45.16 O
ATOM 2 P C B1234 5.195 79.558 66.280 1.00 46.64 P
ATOM 3 OP1 C B1234 4.593 78.385 65.599 1.00 47.63 O
ATOM 4 OP2 C B1234 6.648 79.821 66.120 1.00 47.78 O
ATOM 5 O5' C B1234 4.392 80.867 65.858 1.00 44.28 O
ATOM 6 C5' C B1234 2.962 80.875 65.870 1.00 43.33 C
ATOM 7 C4' C B1234 2.435 82.244 65.516 1.00 44.97 C
ATOM 8 O4' C B1234 2.715 83.183 66.586 1.00 44.84 O
ATOM 9 C3' C B1234 3.038 82.904 64.290 1.00 45.64 C
ATOM 10 O3' C B1234 2.507 82.391 63.076 1.00 46.20 O
ATOM 11 C2' C B1234 2.684 84.364 64.527 1.00 46.63 C
ATOM 12 O2' C B1234 1.339 84.663 64.215 1.00 48.42 O
ATOM 13 C1' C B1234 2.907 84.480 66.039 1.00 47.05 C
ATOM 14 N1 C B1234 4.281 84.928 66.347 1.00 47.98 N
ATOM 15 C2 C B1234 4.545 86.302 66.416 1.00 48.49 C
ATOM 16 O2 C B1234 3.606 87.105 66.291 1.00 49.70 O
ATOM 17 N3 C B1234 5.816 86.718 66.621 1.00 49.41 N
ATOM 18 C4 C B1234 6.795 85.825 66.775 1.00 48.30 C
ATOM 19 N4 C B1234 8.034 86.279 66.962 1.00 49.37 N
ATOM 20 C5 C B1234 6.549 84.425 66.744 1.00 48.16 C
ATOM 21 C6 C B1234 5.292 84.024 66.532 1.00 48.35 C
ATOM 22 P U B1235 3.477 82.188 61.810 1.00 48.04 P
ATOM 23 OP1 U B1235 2.666 81.682 60.674 1.00 47.82 O
ATOM 24 OP2 U B1235 4.655 81.410 62.260 1.00 47.08 O
ATOM 25 O5' U B1235 3.954 83.674 61.473 1.00 47.71 O
TER
Atoms:
OP1: (9.498,77.912,69.006)
OP2: (10.351,80.325,68.798)
C3': (5.333,80.393,68.750)
C1': (4.838,81.946,70.450)
C5': (7.000,79.062,70.185)
O4': (5.676,80.931,70.989)
C8: (6.985,83.286,70.075)
O2': (3.004,80.842,69.383)
C6: (5.985,86.656,70.012)
C5: (6.229,85.273,70.067)
C4: (5.135,84.449,70.271)
P: (9.539,79.306,69.518)
C4': (5.680,79.788,70.098)
C2': (4.271,81.415,69.131)
C2: (3.751,86.158,70.357)
N1: (4.709,87.075,70.167)
N3: (3.856,84.832,70.425)
N6: (6.937,87.568,69.811)
N7: (7.393,84.525,69.945)
N9: (5.628,83.166,70.274)
O5': (8.051,79.866,69.621)
O3': (4.862,79.414,67.840)
OP2: (10.351,80.325,68.798)
C3': (5.333,80.393,68.750)
C1': (4.838,81.946,70.450)
C5': (7.000,79.062,70.185)
O4': (5.676,80.931,70.989)
C8: (6.985,83.286,70.075)
O2': (3.004,80.842,69.383)
C6: (5.985,86.656,70.012)
C5: (6.229,85.273,70.067)
C4: (5.135,84.449,70.271)
P: (9.539,79.306,69.518)
C4': (5.680,79.788,70.098)
C2': (4.271,81.415,69.131)
C2: (3.751,86.158,70.357)
N1: (4.709,87.075,70.167)
N3: (3.856,84.832,70.425)
N6: (6.937,87.568,69.811)
N7: (7.393,84.525,69.945)
N9: (5.628,83.166,70.274)
O5': (8.051,79.866,69.621)
O3': (4.862,79.414,67.840)
C2: (4.545,86.302,66.416)
OP1: (4.593,78.385,65.599)
OP2: (6.648,79.821,66.120)
C4: (6.795,85.825,66.775)
O5': (4.392,80.867,65.858)
C3': (3.038,82.904,64.290)
C1': (2.907,84.480,66.039)
O4': (2.715,83.183,66.586)
C5': (2.962,80.875,65.870)
P: (5.195,79.558,66.280)
O2: (3.606,87.105,66.291)
C4': (2.435,82.244,65.516)
C2': (2.684,84.364,64.527)
O2': (1.339,84.663,64.215)
N1: (4.281,84.928,66.347)
N3: (5.816,86.718,66.621)
N4: (8.034,86.279,66.962)
C6: (5.292,84.024,66.532)
C5: (6.549,84.425,66.744)
O3': (2.507,82.391,63.076)
OP1: (4.593,78.385,65.599)
OP2: (6.648,79.821,66.120)
C4: (6.795,85.825,66.775)
O5': (4.392,80.867,65.858)
C3': (3.038,82.904,64.290)
C1': (2.907,84.480,66.039)
O4': (2.715,83.183,66.586)
C5': (2.962,80.875,65.870)
P: (5.195,79.558,66.280)
O2: (3.606,87.105,66.291)
C4': (2.435,82.244,65.516)
C2': (2.684,84.364,64.527)
O2': (1.339,84.663,64.215)
N1: (4.281,84.928,66.347)
N3: (5.816,86.718,66.621)
N4: (8.034,86.279,66.962)
C6: (5.292,84.024,66.532)
C5: (6.549,84.425,66.744)
O3': (2.507,82.391,63.076)
Image (generated by PyMOL):