Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1L3Z:B4:B5
Extra
PDB:
ATOM 1 O3' U A 3 6.910 1.514 13.229 1.00 37.69 O
ATOM 2 P A A 4 7.552 2.054 11.856 1.00 38.78 P
ATOM 3 OP1 A A 4 8.527 1.031 11.399 1.00 40.67 O
ATOM 4 OP2 A A 4 8.000 3.454 12.064 1.00 39.13 O
ATOM 5 O5' A A 4 6.325 2.113 10.836 1.00 37.72 O
ATOM 6 C5' A A 4 5.620 0.933 10.476 1.00 37.72 C
ATOM 7 C4' A A 4 4.380 1.272 9.676 1.00 37.98 C
ATOM 8 O4' A A 4 3.418 1.970 10.513 1.00 38.12 O
ATOM 9 C3' A A 4 4.541 2.199 8.480 1.00 37.39 C
ATOM 10 O3' A A 4 5.022 1.512 7.330 1.00 37.73 O
ATOM 11 C2' A A 4 3.108 2.663 8.262 1.00 35.47 C
ATOM 12 O2' A A 4 2.320 1.690 7.614 1.00 35.87 O
ATOM 13 C1' A A 4 2.617 2.816 9.702 1.00 35.29 C
ATOM 14 N9 A A 4 2.755 4.190 10.177 1.00 33.11 N
ATOM 15 C8 A A 4 3.794 4.751 10.874 1.00 33.23 C
ATOM 16 N7 A A 4 3.618 6.021 11.151 1.00 33.79 N
ATOM 17 C5 A A 4 2.379 6.314 10.600 1.00 31.34 C
ATOM 18 C6 A A 4 1.618 7.495 10.559 1.00 30.79 C
ATOM 19 N6 A A 4 2.011 8.647 11.099 1.00 28.69 N
ATOM 20 N1 A A 4 0.421 7.448 9.937 1.00 31.76 N
ATOM 21 C2 A A 4 0.026 6.288 9.393 1.00 31.44 C
ATOM 22 N3 A A 4 0.653 5.115 9.365 1.00 30.47 N
ATOM 23 C4 A A 4 1.838 5.197 9.996 1.00 31.75 C
ATOM 24 P C A 5 5.864 2.314 6.221 1.00 38.99 P
ATOM 25 OP1 C A 5 6.456 1.319 5.294 1.00 41.30 O
ATOM 26 OP2 C A 5 6.748 3.282 6.917 1.00 39.72 O
ATOM 27 O5' C A 5 4.769 3.149 5.420 1.00 37.87 O
TER
ATOM 1 O3' A B 4 5.022 1.512 7.330 1.00 37.73 O
ATOM 2 P C B 5 5.864 2.314 6.221 1.00 38.99 P
ATOM 3 OP1 C B 5 6.456 1.319 5.294 1.00 41.30 O
ATOM 4 OP2 C B 5 6.748 3.282 6.917 1.00 39.72 O
ATOM 5 O5' C B 5 4.769 3.149 5.420 1.00 37.87 O
ATOM 6 C5' C B 5 3.757 2.486 4.675 1.00 35.54 C
ATOM 7 C4' C B 5 2.705 3.470 4.222 1.00 33.75 C
ATOM 8 O4' C B 5 2.084 4.072 5.387 1.00 34.88 O
ATOM 9 C3' C B 5 3.189 4.667 3.417 1.00 34.59 C
ATOM 10 O3' C B 5 3.348 4.313 2.048 1.00 33.75 O
ATOM 11 C2' C B 5 2.038 5.651 3.606 1.00 32.13 C
ATOM 12 O2' C B 5 0.933 5.357 2.772 1.00 30.62 O
ATOM 13 C1' C B 5 1.643 5.382 5.062 1.00 32.44 C
ATOM 14 N1 C B 5 2.245 6.337 6.006 1.00 29.26 N
ATOM 15 C2 C B 5 1.561 7.528 6.270 1.00 28.50 C
ATOM 16 O2 C B 5 0.465 7.719 5.721 1.00 27.97 O
ATOM 17 N3 C B 5 2.103 8.435 7.114 1.00 28.50 N
ATOM 18 C4 C B 5 3.282 8.187 7.690 1.00 28.31 C
ATOM 19 N4 C B 5 3.784 9.119 8.507 1.00 24.20 N
ATOM 20 C5 C B 5 3.999 6.972 7.448 1.00 27.98 C
ATOM 21 C6 C B 5 3.447 6.084 6.605 1.00 27.96 C
ATOM 22 P A B 6 4.346 5.155 1.108 1.00 36.72 P
ATOM 23 OP1 A B 6 4.556 4.329 -0.113 1.00 37.64 O
ATOM 24 OP2 A B 6 5.516 5.598 1.903 1.00 33.96 O
ATOM 25 O5' A B 6 3.513 6.452 0.701 1.00 32.59 O
TER
ATOM 2 P A A 4 7.552 2.054 11.856 1.00 38.78 P
ATOM 3 OP1 A A 4 8.527 1.031 11.399 1.00 40.67 O
ATOM 4 OP2 A A 4 8.000 3.454 12.064 1.00 39.13 O
ATOM 5 O5' A A 4 6.325 2.113 10.836 1.00 37.72 O
ATOM 6 C5' A A 4 5.620 0.933 10.476 1.00 37.72 C
ATOM 7 C4' A A 4 4.380 1.272 9.676 1.00 37.98 C
ATOM 8 O4' A A 4 3.418 1.970 10.513 1.00 38.12 O
ATOM 9 C3' A A 4 4.541 2.199 8.480 1.00 37.39 C
ATOM 10 O3' A A 4 5.022 1.512 7.330 1.00 37.73 O
ATOM 11 C2' A A 4 3.108 2.663 8.262 1.00 35.47 C
ATOM 12 O2' A A 4 2.320 1.690 7.614 1.00 35.87 O
ATOM 13 C1' A A 4 2.617 2.816 9.702 1.00 35.29 C
ATOM 14 N9 A A 4 2.755 4.190 10.177 1.00 33.11 N
ATOM 15 C8 A A 4 3.794 4.751 10.874 1.00 33.23 C
ATOM 16 N7 A A 4 3.618 6.021 11.151 1.00 33.79 N
ATOM 17 C5 A A 4 2.379 6.314 10.600 1.00 31.34 C
ATOM 18 C6 A A 4 1.618 7.495 10.559 1.00 30.79 C
ATOM 19 N6 A A 4 2.011 8.647 11.099 1.00 28.69 N
ATOM 20 N1 A A 4 0.421 7.448 9.937 1.00 31.76 N
ATOM 21 C2 A A 4 0.026 6.288 9.393 1.00 31.44 C
ATOM 22 N3 A A 4 0.653 5.115 9.365 1.00 30.47 N
ATOM 23 C4 A A 4 1.838 5.197 9.996 1.00 31.75 C
ATOM 24 P C A 5 5.864 2.314 6.221 1.00 38.99 P
ATOM 25 OP1 C A 5 6.456 1.319 5.294 1.00 41.30 O
ATOM 26 OP2 C A 5 6.748 3.282 6.917 1.00 39.72 O
ATOM 27 O5' C A 5 4.769 3.149 5.420 1.00 37.87 O
TER
ATOM 1 O3' A B 4 5.022 1.512 7.330 1.00 37.73 O
ATOM 2 P C B 5 5.864 2.314 6.221 1.00 38.99 P
ATOM 3 OP1 C B 5 6.456 1.319 5.294 1.00 41.30 O
ATOM 4 OP2 C B 5 6.748 3.282 6.917 1.00 39.72 O
ATOM 5 O5' C B 5 4.769 3.149 5.420 1.00 37.87 O
ATOM 6 C5' C B 5 3.757 2.486 4.675 1.00 35.54 C
ATOM 7 C4' C B 5 2.705 3.470 4.222 1.00 33.75 C
ATOM 8 O4' C B 5 2.084 4.072 5.387 1.00 34.88 O
ATOM 9 C3' C B 5 3.189 4.667 3.417 1.00 34.59 C
ATOM 10 O3' C B 5 3.348 4.313 2.048 1.00 33.75 O
ATOM 11 C2' C B 5 2.038 5.651 3.606 1.00 32.13 C
ATOM 12 O2' C B 5 0.933 5.357 2.772 1.00 30.62 O
ATOM 13 C1' C B 5 1.643 5.382 5.062 1.00 32.44 C
ATOM 14 N1 C B 5 2.245 6.337 6.006 1.00 29.26 N
ATOM 15 C2 C B 5 1.561 7.528 6.270 1.00 28.50 C
ATOM 16 O2 C B 5 0.465 7.719 5.721 1.00 27.97 O
ATOM 17 N3 C B 5 2.103 8.435 7.114 1.00 28.50 N
ATOM 18 C4 C B 5 3.282 8.187 7.690 1.00 28.31 C
ATOM 19 N4 C B 5 3.784 9.119 8.507 1.00 24.20 N
ATOM 20 C5 C B 5 3.999 6.972 7.448 1.00 27.98 C
ATOM 21 C6 C B 5 3.447 6.084 6.605 1.00 27.96 C
ATOM 22 P A B 6 4.346 5.155 1.108 1.00 36.72 P
ATOM 23 OP1 A B 6 4.556 4.329 -0.113 1.00 37.64 O
ATOM 24 OP2 A B 6 5.516 5.598 1.903 1.00 33.96 O
ATOM 25 O5' A B 6 3.513 6.452 0.701 1.00 32.59 O
TER
Atoms:
OP1: (8.527,1.031,11.399)
OP2: (8.000,3.454,12.064)
C3': (4.541,2.199,8.480)
C1': (2.617,2.816,9.702)
C5': (5.620,0.933,10.476)
O4': (3.418,1.970,10.513)
C8: (3.794,4.751,10.874)
O2': (2.320,1.690,7.614)
C6: (1.618,7.495,10.559)
C5: (2.379,6.314,10.600)
C4: (1.838,5.197,9.996)
P: (7.552,2.054,11.856)
C4': (4.380,1.272,9.676)
C2': (3.108,2.663,8.262)
C2: (0.026,6.288,9.393)
N1: (0.421,7.448,9.937)
N3: (0.653,5.115,9.365)
N6: (2.011,8.647,11.099)
N7: (3.618,6.021,11.151)
N9: (2.755,4.190,10.177)
O5': (6.325,2.113,10.836)
O3': (5.022,1.512,7.330)
OP2: (8.000,3.454,12.064)
C3': (4.541,2.199,8.480)
C1': (2.617,2.816,9.702)
C5': (5.620,0.933,10.476)
O4': (3.418,1.970,10.513)
C8: (3.794,4.751,10.874)
O2': (2.320,1.690,7.614)
C6: (1.618,7.495,10.559)
C5: (2.379,6.314,10.600)
C4: (1.838,5.197,9.996)
P: (7.552,2.054,11.856)
C4': (4.380,1.272,9.676)
C2': (3.108,2.663,8.262)
C2: (0.026,6.288,9.393)
N1: (0.421,7.448,9.937)
N3: (0.653,5.115,9.365)
N6: (2.011,8.647,11.099)
N7: (3.618,6.021,11.151)
N9: (2.755,4.190,10.177)
O5': (6.325,2.113,10.836)
O3': (5.022,1.512,7.330)
C2: (1.561,7.528,6.270)
OP1: (6.456,1.319,5.294)
OP2: (6.748,3.282,6.917)
C4: (3.282,8.187,7.690)
O5': (4.769,3.149,5.420)
C3': (3.189,4.667,3.417)
C1': (1.643,5.382,5.062)
O4': (2.084,4.072,5.387)
C5': (3.757,2.486,4.675)
P: (5.864,2.314,6.221)
O2: (0.465,7.719,5.721)
C4': (2.705,3.470,4.222)
C2': (2.038,5.651,3.606)
O2': (0.933,5.357,2.772)
N1: (2.245,6.337,6.006)
N3: (2.103,8.435,7.114)
N4: (3.784,9.119,8.507)
C6: (3.447,6.084,6.605)
C5: (3.999,6.972,7.448)
O3': (3.348,4.313,2.048)
OP1: (6.456,1.319,5.294)
OP2: (6.748,3.282,6.917)
C4: (3.282,8.187,7.690)
O5': (4.769,3.149,5.420)
C3': (3.189,4.667,3.417)
C1': (1.643,5.382,5.062)
O4': (2.084,4.072,5.387)
C5': (3.757,2.486,4.675)
P: (5.864,2.314,6.221)
O2: (0.465,7.719,5.721)
C4': (2.705,3.470,4.222)
C2': (2.038,5.651,3.606)
O2': (0.933,5.357,2.772)
N1: (2.245,6.337,6.006)
N3: (2.103,8.435,7.114)
N4: (3.784,9.119,8.507)
C6: (3.447,6.084,6.605)
C5: (3.999,6.972,7.448)
O3': (3.348,4.313,2.048)
Image (generated by PyMOL):