ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1:A2031

Extra

PDB:
ATOM 1 P A A 1 20.715 148.755 101.510 1.00 75.17 P
ATOM 2 OP1 A A 1 20.296 149.045 100.120 1.00 75.99 O
ATOM 3 OP2 A A 1 21.221 147.405 101.848 1.00 74.16 O
ATOM 4 O5' A A 1 21.855 149.805 101.856 1.00 71.29 O
ATOM 5 C5' A A 1 23.187 149.628 101.375 1.00 65.24 C
ATOM 6 C4' A A 1 24.159 150.366 102.265 1.00 60.78 C
ATOM 7 O4' A A 1 23.937 149.996 103.648 1.00 59.72 O
ATOM 8 C3' A A 1 25.603 150.010 102.009 1.00 58.59 C
ATOM 9 O3' A A 1 26.077 150.755 100.913 1.00 56.36 O
ATOM 10 C2' A A 1 26.257 150.307 103.352 1.00 58.40 C
ATOM 11 O2' A A 1 26.431 151.689 103.584 1.00 59.53 O
ATOM 12 C1' A A 1 25.176 149.797 104.309 1.00 57.92 C
ATOM 13 N9 A A 1 25.272 148.367 104.617 1.00 57.21 N
ATOM 14 C8 A A 1 24.259 147.444 104.514 1.00 56.45 C
ATOM 15 N7 A A 1 24.616 146.222 104.828 1.00 55.94 N
ATOM 16 C5 A A 1 25.954 146.345 105.171 1.00 56.39 C
ATOM 17 C6 A A 1 26.903 145.405 105.596 1.00 56.10 C
ATOM 18 N6 A A 1 26.635 144.106 105.756 1.00 57.00 N
ATOM 19 N1 A A 1 28.150 145.847 105.853 1.00 56.18 N
ATOM 20 C2 A A 1 28.417 147.151 105.691 1.00 56.79 C
ATOM 21 N3 A A 1 27.608 148.139 105.299 1.00 57.00 N
ATOM 22 C4 A A 1 26.373 147.663 105.050 1.00 57.12 C
ATOM 23 P U A 2 26.236 150.040 99.486 1.00 58.59 P
ATOM 24 OP1 U A 2 26.591 151.117 98.527 1.00 59.61 O
ATOM 25 OP2 U A 2 25.047 149.168 99.213 1.00 58.54 O
ATOM 26 O5' U A 2 27.520 149.118 99.684 1.00 56.80 O
TER

ATOM 1 O3' C B2030 30.154 139.018 111.932 1.00 39.01 O
ATOM 2 P A B2031 31.443 139.445 111.086 1.00 39.62 P
ATOM 3 OP1 A B2031 31.951 138.253 110.370 1.00 38.57 O
ATOM 4 OP2 A B2031 32.314 140.150 112.043 1.00 40.35 O
ATOM 5 O5' A B2031 30.909 140.540 110.054 1.00 40.52 O
ATOM 6 C5' A B2031 29.874 140.256 109.078 1.00 38.93 C
ATOM 7 C4' A B2031 29.621 141.488 108.231 1.00 38.37 C
ATOM 8 O4' A B2031 28.985 142.510 109.037 1.00 37.44 O
ATOM 9 C3' A B2031 30.879 142.160 107.698 1.00 38.86 C
ATOM 10 O3' A B2031 31.362 141.614 106.475 1.00 40.46 O
ATOM 11 C2' A B2031 30.450 143.604 107.520 1.00 37.07 C
ATOM 12 O2' A B2031 29.772 143.763 106.297 1.00 35.87 O
ATOM 13 C1' A B2031 29.490 143.786 108.690 1.00 37.00 C
ATOM 14 N9 A B2031 30.156 144.341 109.866 1.00 36.60 N
ATOM 15 C8 A B2031 30.602 143.655 110.955 1.00 35.70 C
ATOM 16 N7 A B2031 31.166 144.407 111.860 1.00 36.64 N
ATOM 17 C5 A B2031 31.098 145.678 111.327 1.00 35.16 C
ATOM 18 C6 A B2031 31.551 146.920 111.794 1.00 35.21 C
ATOM 19 N6 A B2031 32.201 147.083 112.949 1.00 33.27 N
ATOM 20 N1 A B2031 31.319 148.000 111.021 1.00 35.06 N
ATOM 21 C2 A B2031 30.685 147.824 109.859 1.00 35.09 C
ATOM 22 N3 A B2031 30.226 146.706 109.311 1.00 36.39 N
ATOM 23 C4 A B2031 30.468 145.655 110.103 1.00 35.93 C
ATOM 24 P C B2032 32.906 141.792 106.109 1.00 39.99 P
ATOM 25 OP1 C B2032 33.207 141.104 104.835 1.00 41.93 O
ATOM 26 OP2 C B2032 33.600 141.380 107.347 1.00 40.13 O
ATOM 27 O5' C B2032 33.047 143.355 105.852 1.00 39.37 O
TER

Atoms:
OP1: (20.296,149.045,100.120)
OP2: (21.221,147.405,101.848)
C3': (25.603,150.010,102.009)
C1': (25.176,149.797,104.309)
C5': (23.187,149.628,101.375)
O4': (23.937,149.996,103.648)
C8: (24.259,147.444,104.514)
O2': (26.431,151.689,103.584)
C6: (26.903,145.405,105.596)
C5: (25.954,146.345,105.171)
C4: (26.373,147.663,105.050)
P: (20.715,148.755,101.510)
C4': (24.159,150.366,102.265)
C2': (26.257,150.307,103.352)
C2: (28.417,147.151,105.691)
N1: (28.150,145.847,105.853)
N3: (27.608,148.139,105.299)
N6: (26.635,144.106,105.756)
N7: (24.616,146.222,104.828)
N9: (25.272,148.367,104.617)
O5': (21.855,149.805,101.856)
O3': (26.077,150.755,100.913)
OP1: (31.951,138.253,110.370)
OP2: (32.314,140.150,112.043)
C3': (30.879,142.160,107.698)
C1': (29.490,143.786,108.690)
C5': (29.874,140.256,109.078)
O4': (28.985,142.510,109.037)
C8: (30.602,143.655,110.955)
O2': (29.772,143.763,106.297)
C6: (31.551,146.920,111.794)
C5: (31.098,145.678,111.327)
C4: (30.468,145.655,110.103)
P: (31.443,139.445,111.086)
C4': (29.621,141.488,108.231)
C2': (30.450,143.604,107.520)
C2: (30.685,147.824,109.859)
N1: (31.319,148.000,111.021)
N3: (30.226,146.706,109.311)
N6: (32.201,147.083,112.949)
N7: (31.166,144.407,111.860)
N9: (30.156,144.341,109.866)
O5': (30.909,140.540,110.054)
O3': (31.362,141.614,106.475)
Image (generated by PyMOL):
PyMOL image
show in jmol