Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1RPU:D3:D4
Extra
PDB:
ATOM 1 O3' U A 2 -1.236 26.315 85.583 0.60 48.69 O
ATOM 2 P A A 3 -1.408 25.817 84.064 0.60 51.32 P
ATOM 3 OP1 A A 3 -0.079 25.923 83.405 0.60 50.12 O
ATOM 4 OP2 A A 3 -2.589 26.486 83.451 0.60 48.69 O
ATOM 5 O5' A A 3 -1.762 24.278 84.249 0.60 52.79 O
ATOM 6 C5' A A 3 -2.846 23.685 83.552 0.60 54.67 C
ATOM 7 C4' A A 3 -3.492 22.629 84.412 0.60 55.39 C
ATOM 8 O4' A A 3 -4.344 23.258 85.407 0.60 55.69 O
ATOM 9 C3' A A 3 -4.436 21.712 83.664 0.60 56.17 C
ATOM 10 O3' A A 3 -3.678 20.680 83.057 0.60 57.49 O
ATOM 11 C2' A A 3 -5.308 21.191 84.793 0.60 55.94 C
ATOM 12 O2' A A 3 -4.606 20.248 85.579 0.60 55.93 O
ATOM 13 C1' A A 3 -5.506 22.466 85.612 0.60 55.20 C
ATOM 14 N9 A A 3 -6.673 23.260 85.216 0.60 54.34 N
ATOM 15 C8 A A 3 -6.662 24.542 84.726 0.60 54.63 C
ATOM 16 N7 A A 3 -7.856 25.029 84.484 0.60 54.39 N
ATOM 17 C5 A A 3 -8.715 23.996 84.832 0.60 54.27 C
ATOM 18 C6 A A 3 -10.125 23.886 84.812 0.60 54.05 C
ATOM 19 N6 A A 3 -10.944 24.873 84.430 0.60 52.66 N
ATOM 20 N1 A A 3 -10.669 22.715 85.210 0.60 53.83 N
ATOM 21 C2 A A 3 -9.846 21.731 85.610 0.60 54.28 C
ATOM 22 N3 A A 3 -8.510 21.719 85.684 0.60 54.58 N
ATOM 23 C4 A A 3 -8.000 22.894 85.275 0.60 54.32 C
ATOM 24 P C A 4 -3.634 20.567 81.455 0.60 58.06 P
ATOM 25 OP1 C A 4 -2.210 20.541 81.023 0.60 57.31 O
ATOM 26 OP2 C A 4 -4.563 21.576 80.873 0.60 55.73 O
ATOM 27 O5' C A 4 -4.249 19.127 81.193 0.60 55.84 O
TER
ATOM 1 O3' A B 3 -3.678 20.680 83.057 0.60 57.49 O
ATOM 2 P C B 4 -3.634 20.567 81.455 0.60 58.06 P
ATOM 3 OP1 C B 4 -2.210 20.541 81.023 0.60 57.31 O
ATOM 4 OP2 C B 4 -4.563 21.576 80.873 0.60 55.73 O
ATOM 5 O5' C B 4 -4.249 19.127 81.193 0.60 55.84 O
ATOM 6 C5' C B 4 -5.428 18.988 80.431 0.60 52.52 C
ATOM 7 C4' C B 4 -6.383 18.053 81.114 0.60 49.22 C
ATOM 8 O4' C B 4 -6.865 18.634 82.359 0.60 46.40 O
ATOM 9 C3' C B 4 -7.641 17.840 80.303 0.60 48.74 C
ATOM 10 O3' C B 4 -7.394 16.894 79.276 0.60 46.81 O
ATOM 11 C2' C B 4 -8.626 17.416 81.377 0.60 48.14 C
ATOM 12 O2' C B 4 -8.387 16.099 81.830 0.60 48.90 O
ATOM 13 C1' C B 4 -8.264 18.411 82.481 0.60 46.78 C
ATOM 14 N1 C B 4 -8.933 19.715 82.314 0.60 46.39 N
ATOM 15 C2 C B 4 -10.338 19.809 82.461 0.60 46.38 C
ATOM 16 O2 C B 4 -11.001 18.787 82.706 0.60 47.43 O
ATOM 17 N3 C B 4 -10.931 21.016 82.325 0.60 44.31 N
ATOM 18 C4 C B 4 -10.198 22.093 82.050 0.60 43.72 C
ATOM 19 N4 C B 4 -10.830 23.260 81.939 0.60 44.79 N
ATOM 20 C5 C B 4 -8.784 22.024 81.880 0.60 43.07 C
ATOM 21 C6 C B 4 -8.199 20.830 82.021 0.60 44.77 C
ATOM 22 P G B 5 -7.576 17.341 77.745 0.60 46.61 P
ATOM 23 OP1 G B 5 -6.815 16.398 76.875 0.60 45.36 O
ATOM 24 OP2 G B 5 -7.322 18.803 77.642 0.60 44.40 O
ATOM 25 O5' G B 5 -9.125 17.089 77.512 0.60 44.67 O
TER
ATOM 2 P A A 3 -1.408 25.817 84.064 0.60 51.32 P
ATOM 3 OP1 A A 3 -0.079 25.923 83.405 0.60 50.12 O
ATOM 4 OP2 A A 3 -2.589 26.486 83.451 0.60 48.69 O
ATOM 5 O5' A A 3 -1.762 24.278 84.249 0.60 52.79 O
ATOM 6 C5' A A 3 -2.846 23.685 83.552 0.60 54.67 C
ATOM 7 C4' A A 3 -3.492 22.629 84.412 0.60 55.39 C
ATOM 8 O4' A A 3 -4.344 23.258 85.407 0.60 55.69 O
ATOM 9 C3' A A 3 -4.436 21.712 83.664 0.60 56.17 C
ATOM 10 O3' A A 3 -3.678 20.680 83.057 0.60 57.49 O
ATOM 11 C2' A A 3 -5.308 21.191 84.793 0.60 55.94 C
ATOM 12 O2' A A 3 -4.606 20.248 85.579 0.60 55.93 O
ATOM 13 C1' A A 3 -5.506 22.466 85.612 0.60 55.20 C
ATOM 14 N9 A A 3 -6.673 23.260 85.216 0.60 54.34 N
ATOM 15 C8 A A 3 -6.662 24.542 84.726 0.60 54.63 C
ATOM 16 N7 A A 3 -7.856 25.029 84.484 0.60 54.39 N
ATOM 17 C5 A A 3 -8.715 23.996 84.832 0.60 54.27 C
ATOM 18 C6 A A 3 -10.125 23.886 84.812 0.60 54.05 C
ATOM 19 N6 A A 3 -10.944 24.873 84.430 0.60 52.66 N
ATOM 20 N1 A A 3 -10.669 22.715 85.210 0.60 53.83 N
ATOM 21 C2 A A 3 -9.846 21.731 85.610 0.60 54.28 C
ATOM 22 N3 A A 3 -8.510 21.719 85.684 0.60 54.58 N
ATOM 23 C4 A A 3 -8.000 22.894 85.275 0.60 54.32 C
ATOM 24 P C A 4 -3.634 20.567 81.455 0.60 58.06 P
ATOM 25 OP1 C A 4 -2.210 20.541 81.023 0.60 57.31 O
ATOM 26 OP2 C A 4 -4.563 21.576 80.873 0.60 55.73 O
ATOM 27 O5' C A 4 -4.249 19.127 81.193 0.60 55.84 O
TER
ATOM 1 O3' A B 3 -3.678 20.680 83.057 0.60 57.49 O
ATOM 2 P C B 4 -3.634 20.567 81.455 0.60 58.06 P
ATOM 3 OP1 C B 4 -2.210 20.541 81.023 0.60 57.31 O
ATOM 4 OP2 C B 4 -4.563 21.576 80.873 0.60 55.73 O
ATOM 5 O5' C B 4 -4.249 19.127 81.193 0.60 55.84 O
ATOM 6 C5' C B 4 -5.428 18.988 80.431 0.60 52.52 C
ATOM 7 C4' C B 4 -6.383 18.053 81.114 0.60 49.22 C
ATOM 8 O4' C B 4 -6.865 18.634 82.359 0.60 46.40 O
ATOM 9 C3' C B 4 -7.641 17.840 80.303 0.60 48.74 C
ATOM 10 O3' C B 4 -7.394 16.894 79.276 0.60 46.81 O
ATOM 11 C2' C B 4 -8.626 17.416 81.377 0.60 48.14 C
ATOM 12 O2' C B 4 -8.387 16.099 81.830 0.60 48.90 O
ATOM 13 C1' C B 4 -8.264 18.411 82.481 0.60 46.78 C
ATOM 14 N1 C B 4 -8.933 19.715 82.314 0.60 46.39 N
ATOM 15 C2 C B 4 -10.338 19.809 82.461 0.60 46.38 C
ATOM 16 O2 C B 4 -11.001 18.787 82.706 0.60 47.43 O
ATOM 17 N3 C B 4 -10.931 21.016 82.325 0.60 44.31 N
ATOM 18 C4 C B 4 -10.198 22.093 82.050 0.60 43.72 C
ATOM 19 N4 C B 4 -10.830 23.260 81.939 0.60 44.79 N
ATOM 20 C5 C B 4 -8.784 22.024 81.880 0.60 43.07 C
ATOM 21 C6 C B 4 -8.199 20.830 82.021 0.60 44.77 C
ATOM 22 P G B 5 -7.576 17.341 77.745 0.60 46.61 P
ATOM 23 OP1 G B 5 -6.815 16.398 76.875 0.60 45.36 O
ATOM 24 OP2 G B 5 -7.322 18.803 77.642 0.60 44.40 O
ATOM 25 O5' G B 5 -9.125 17.089 77.512 0.60 44.67 O
TER
Atoms:
OP1: (-0.079,25.923,83.405)
OP2: (-2.589,26.486,83.451)
C3': (-4.436,21.712,83.664)
C1': (-5.506,22.466,85.612)
C5': (-2.846,23.685,83.552)
O4': (-4.344,23.258,85.407)
C8: (-6.662,24.542,84.726)
O2': (-4.606,20.248,85.579)
C6: (-10.125,23.886,84.812)
C5: (-8.715,23.996,84.832)
C4: (-8.000,22.894,85.275)
P: (-1.408,25.817,84.064)
C4': (-3.492,22.629,84.412)
C2': (-5.308,21.191,84.793)
C2: (-9.846,21.731,85.610)
N1: (-10.669,22.715,85.210)
N3: (-8.510,21.719,85.684)
N6: (-10.944,24.873,84.430)
N7: (-7.856,25.029,84.484)
N9: (-6.673,23.260,85.216)
O5': (-1.762,24.278,84.249)
O3': (-3.678,20.680,83.057)
OP2: (-2.589,26.486,83.451)
C3': (-4.436,21.712,83.664)
C1': (-5.506,22.466,85.612)
C5': (-2.846,23.685,83.552)
O4': (-4.344,23.258,85.407)
C8: (-6.662,24.542,84.726)
O2': (-4.606,20.248,85.579)
C6: (-10.125,23.886,84.812)
C5: (-8.715,23.996,84.832)
C4: (-8.000,22.894,85.275)
P: (-1.408,25.817,84.064)
C4': (-3.492,22.629,84.412)
C2': (-5.308,21.191,84.793)
C2: (-9.846,21.731,85.610)
N1: (-10.669,22.715,85.210)
N3: (-8.510,21.719,85.684)
N6: (-10.944,24.873,84.430)
N7: (-7.856,25.029,84.484)
N9: (-6.673,23.260,85.216)
O5': (-1.762,24.278,84.249)
O3': (-3.678,20.680,83.057)
C2: (-10.338,19.809,82.461)
OP1: (-2.210,20.541,81.023)
OP2: (-4.563,21.576,80.873)
C4: (-10.198,22.093,82.050)
O5': (-4.249,19.127,81.193)
C3': (-7.641,17.840,80.303)
C1': (-8.264,18.411,82.481)
O4': (-6.865,18.634,82.359)
C5': (-5.428,18.988,80.431)
P: (-3.634,20.567,81.455)
O2: (-11.001,18.787,82.706)
C4': (-6.383,18.053,81.114)
C2': (-8.626,17.416,81.377)
O2': (-8.387,16.099,81.830)
N1: (-8.933,19.715,82.314)
N3: (-10.931,21.016,82.325)
N4: (-10.830,23.260,81.939)
C6: (-8.199,20.830,82.021)
C5: (-8.784,22.024,81.880)
O3': (-7.394,16.894,79.276)
OP1: (-2.210,20.541,81.023)
OP2: (-4.563,21.576,80.873)
C4: (-10.198,22.093,82.050)
O5': (-4.249,19.127,81.193)
C3': (-7.641,17.840,80.303)
C1': (-8.264,18.411,82.481)
O4': (-6.865,18.634,82.359)
C5': (-5.428,18.988,80.431)
P: (-3.634,20.567,81.455)
O2: (-11.001,18.787,82.706)
C4': (-6.383,18.053,81.114)
C2': (-8.626,17.416,81.377)
O2': (-8.387,16.099,81.830)
N1: (-8.933,19.715,82.314)
N3: (-10.931,21.016,82.325)
N4: (-10.830,23.260,81.939)
C6: (-8.199,20.830,82.021)
C5: (-8.784,22.024,81.880)
O3': (-7.394,16.894,79.276)
Image (generated by PyMOL):