Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01839:01840
Extra
PDB:
ATOM 1 O3' C A1838 106.038 124.176 71.364 1.00 46.87 O
ATOM 2 P A A1839 105.209 124.631 72.664 1.00 45.78 P
ATOM 3 OP1 A A1839 103.798 124.240 72.456 1.00 43.62 O
ATOM 4 OP2 A A1839 105.541 126.042 72.990 1.00 44.86 O
ATOM 5 O5' A A1839 105.804 123.692 73.793 1.00 42.79 O
ATOM 6 C5' A A1839 105.857 124.107 75.146 1.00 42.75 C
ATOM 7 C4' A A1839 106.759 123.184 75.897 1.00 43.10 C
ATOM 8 O4' A A1839 108.039 123.142 75.224 1.00 42.81 O
ATOM 9 C3' A A1839 107.065 123.586 77.324 1.00 43.27 C
ATOM 10 O3' A A1839 106.024 123.132 78.189 1.00 42.82 O
ATOM 11 C2' A A1839 108.404 122.899 77.548 1.00 43.35 C
ATOM 12 O2' A A1839 108.267 121.510 77.725 1.00 40.55 O
ATOM 13 C1' A A1839 109.076 123.111 76.186 1.00 44.85 C
ATOM 14 N9 A A1839 109.814 124.374 76.092 1.00 46.77 N
ATOM 15 C8 A A1839 109.567 125.436 75.248 1.00 47.45 C
ATOM 16 N7 A A1839 110.382 126.452 75.420 1.00 47.11 N
ATOM 17 C5 A A1839 111.225 126.031 76.443 1.00 47.12 C
ATOM 18 C6 A A1839 112.297 126.654 77.097 1.00 45.00 C
ATOM 19 N6 A A1839 112.716 127.885 76.813 1.00 45.43 N
ATOM 20 N1 A A1839 112.931 125.961 78.066 1.00 45.07 N
ATOM 21 C2 A A1839 112.507 124.726 78.355 1.00 44.43 C
ATOM 22 N3 A A1839 111.511 124.033 77.818 1.00 45.40 N
ATOM 23 C4 A A1839 110.898 124.749 76.856 1.00 47.25 C
ATOM 24 P C A1840 105.409 124.124 79.291 1.00 43.74 P
ATOM 25 OP1 C A1840 104.081 123.633 79.692 1.00 43.83 O
ATOM 26 OP2 C A1840 105.548 125.517 78.805 1.00 44.49 O
ATOM 27 O5' C A1840 106.361 123.888 80.537 1.00 42.14 O
TER
ATOM 1 O3' A B1839 106.024 123.132 78.189 1.00 42.82 O
ATOM 2 P C B1840 105.409 124.124 79.291 1.00 43.74 P
ATOM 3 OP1 C B1840 104.081 123.633 79.692 1.00 43.83 O
ATOM 4 OP2 C B1840 105.548 125.517 78.805 1.00 44.49 O
ATOM 5 O5' C B1840 106.361 123.888 80.537 1.00 42.14 O
ATOM 6 C5' C B1840 106.495 122.579 81.092 1.00 42.03 C
ATOM 7 C4' C B1840 107.767 122.477 81.883 1.00 42.99 C
ATOM 8 O4' C B1840 108.888 122.783 81.014 1.00 44.18 O
ATOM 9 C3' C B1840 107.916 123.460 83.033 1.00 42.53 C
ATOM 10 O3' C B1840 107.241 123.015 84.202 1.00 39.66 O
ATOM 11 C2' C B1840 109.425 123.486 83.220 1.00 44.56 C
ATOM 12 O2' C B1840 109.923 122.339 83.859 1.00 46.99 O
ATOM 13 C1' C B1840 109.907 123.412 81.775 1.00 45.65 C
ATOM 14 N1 C B1840 110.214 124.744 81.215 1.00 47.47 N
ATOM 15 C2 C B1840 111.410 125.352 81.593 1.00 47.57 C
ATOM 16 O2 C B1840 112.145 124.767 82.401 1.00 50.84 O
ATOM 17 N3 C B1840 111.738 126.554 81.077 1.00 46.60 N
ATOM 18 C4 C B1840 110.920 127.151 80.215 1.00 46.88 C
ATOM 19 N4 C B1840 111.301 128.325 79.709 1.00 46.15 N
ATOM 20 C5 C B1840 109.679 126.568 79.827 1.00 47.86 C
ATOM 21 C6 C B1840 109.367 125.374 80.347 1.00 47.47 C
ATOM 22 P U B1841 106.648 124.087 85.240 1.00 39.09 P
ATOM 23 OP1 U B1841 105.915 123.373 86.303 1.00 39.88 O
ATOM 24 OP2 U B1841 105.969 125.140 84.470 1.00 38.84 O
ATOM 25 O5' U B1841 107.927 124.754 85.905 1.00 42.50 O
TER
ATOM 2 P A A1839 105.209 124.631 72.664 1.00 45.78 P
ATOM 3 OP1 A A1839 103.798 124.240 72.456 1.00 43.62 O
ATOM 4 OP2 A A1839 105.541 126.042 72.990 1.00 44.86 O
ATOM 5 O5' A A1839 105.804 123.692 73.793 1.00 42.79 O
ATOM 6 C5' A A1839 105.857 124.107 75.146 1.00 42.75 C
ATOM 7 C4' A A1839 106.759 123.184 75.897 1.00 43.10 C
ATOM 8 O4' A A1839 108.039 123.142 75.224 1.00 42.81 O
ATOM 9 C3' A A1839 107.065 123.586 77.324 1.00 43.27 C
ATOM 10 O3' A A1839 106.024 123.132 78.189 1.00 42.82 O
ATOM 11 C2' A A1839 108.404 122.899 77.548 1.00 43.35 C
ATOM 12 O2' A A1839 108.267 121.510 77.725 1.00 40.55 O
ATOM 13 C1' A A1839 109.076 123.111 76.186 1.00 44.85 C
ATOM 14 N9 A A1839 109.814 124.374 76.092 1.00 46.77 N
ATOM 15 C8 A A1839 109.567 125.436 75.248 1.00 47.45 C
ATOM 16 N7 A A1839 110.382 126.452 75.420 1.00 47.11 N
ATOM 17 C5 A A1839 111.225 126.031 76.443 1.00 47.12 C
ATOM 18 C6 A A1839 112.297 126.654 77.097 1.00 45.00 C
ATOM 19 N6 A A1839 112.716 127.885 76.813 1.00 45.43 N
ATOM 20 N1 A A1839 112.931 125.961 78.066 1.00 45.07 N
ATOM 21 C2 A A1839 112.507 124.726 78.355 1.00 44.43 C
ATOM 22 N3 A A1839 111.511 124.033 77.818 1.00 45.40 N
ATOM 23 C4 A A1839 110.898 124.749 76.856 1.00 47.25 C
ATOM 24 P C A1840 105.409 124.124 79.291 1.00 43.74 P
ATOM 25 OP1 C A1840 104.081 123.633 79.692 1.00 43.83 O
ATOM 26 OP2 C A1840 105.548 125.517 78.805 1.00 44.49 O
ATOM 27 O5' C A1840 106.361 123.888 80.537 1.00 42.14 O
TER
ATOM 1 O3' A B1839 106.024 123.132 78.189 1.00 42.82 O
ATOM 2 P C B1840 105.409 124.124 79.291 1.00 43.74 P
ATOM 3 OP1 C B1840 104.081 123.633 79.692 1.00 43.83 O
ATOM 4 OP2 C B1840 105.548 125.517 78.805 1.00 44.49 O
ATOM 5 O5' C B1840 106.361 123.888 80.537 1.00 42.14 O
ATOM 6 C5' C B1840 106.495 122.579 81.092 1.00 42.03 C
ATOM 7 C4' C B1840 107.767 122.477 81.883 1.00 42.99 C
ATOM 8 O4' C B1840 108.888 122.783 81.014 1.00 44.18 O
ATOM 9 C3' C B1840 107.916 123.460 83.033 1.00 42.53 C
ATOM 10 O3' C B1840 107.241 123.015 84.202 1.00 39.66 O
ATOM 11 C2' C B1840 109.425 123.486 83.220 1.00 44.56 C
ATOM 12 O2' C B1840 109.923 122.339 83.859 1.00 46.99 O
ATOM 13 C1' C B1840 109.907 123.412 81.775 1.00 45.65 C
ATOM 14 N1 C B1840 110.214 124.744 81.215 1.00 47.47 N
ATOM 15 C2 C B1840 111.410 125.352 81.593 1.00 47.57 C
ATOM 16 O2 C B1840 112.145 124.767 82.401 1.00 50.84 O
ATOM 17 N3 C B1840 111.738 126.554 81.077 1.00 46.60 N
ATOM 18 C4 C B1840 110.920 127.151 80.215 1.00 46.88 C
ATOM 19 N4 C B1840 111.301 128.325 79.709 1.00 46.15 N
ATOM 20 C5 C B1840 109.679 126.568 79.827 1.00 47.86 C
ATOM 21 C6 C B1840 109.367 125.374 80.347 1.00 47.47 C
ATOM 22 P U B1841 106.648 124.087 85.240 1.00 39.09 P
ATOM 23 OP1 U B1841 105.915 123.373 86.303 1.00 39.88 O
ATOM 24 OP2 U B1841 105.969 125.140 84.470 1.00 38.84 O
ATOM 25 O5' U B1841 107.927 124.754 85.905 1.00 42.50 O
TER
Atoms:
OP1: (103.798,124.240,72.456)
OP2: (105.541,126.042,72.990)
C3': (107.065,123.586,77.324)
C1': (109.076,123.111,76.186)
C5': (105.857,124.107,75.146)
O4': (108.039,123.142,75.224)
C8: (109.567,125.436,75.248)
O2': (108.267,121.510,77.725)
C6: (112.297,126.654,77.097)
C5: (111.225,126.031,76.443)
C4: (110.898,124.749,76.856)
P: (105.209,124.631,72.664)
C4': (106.759,123.184,75.897)
C2': (108.404,122.899,77.548)
C2: (112.507,124.726,78.355)
N1: (112.931,125.961,78.066)
N3: (111.511,124.033,77.818)
N6: (112.716,127.885,76.813)
N7: (110.382,126.452,75.420)
N9: (109.814,124.374,76.092)
O5': (105.804,123.692,73.793)
O3': (106.024,123.132,78.189)
OP2: (105.541,126.042,72.990)
C3': (107.065,123.586,77.324)
C1': (109.076,123.111,76.186)
C5': (105.857,124.107,75.146)
O4': (108.039,123.142,75.224)
C8: (109.567,125.436,75.248)
O2': (108.267,121.510,77.725)
C6: (112.297,126.654,77.097)
C5: (111.225,126.031,76.443)
C4: (110.898,124.749,76.856)
P: (105.209,124.631,72.664)
C4': (106.759,123.184,75.897)
C2': (108.404,122.899,77.548)
C2: (112.507,124.726,78.355)
N1: (112.931,125.961,78.066)
N3: (111.511,124.033,77.818)
N6: (112.716,127.885,76.813)
N7: (110.382,126.452,75.420)
N9: (109.814,124.374,76.092)
O5': (105.804,123.692,73.793)
O3': (106.024,123.132,78.189)
C2: (111.410,125.352,81.593)
OP1: (104.081,123.633,79.692)
OP2: (105.548,125.517,78.805)
C4: (110.920,127.151,80.215)
O5': (106.361,123.888,80.537)
C3': (107.916,123.460,83.033)
C1': (109.907,123.412,81.775)
O4': (108.888,122.783,81.014)
C5': (106.495,122.579,81.092)
P: (105.409,124.124,79.291)
O2: (112.145,124.767,82.401)
C4': (107.767,122.477,81.883)
C2': (109.425,123.486,83.220)
O2': (109.923,122.339,83.859)
N1: (110.214,124.744,81.215)
N3: (111.738,126.554,81.077)
N4: (111.301,128.325,79.709)
C6: (109.367,125.374,80.347)
C5: (109.679,126.568,79.827)
O3': (107.241,123.015,84.202)
OP1: (104.081,123.633,79.692)
OP2: (105.548,125.517,78.805)
C4: (110.920,127.151,80.215)
O5': (106.361,123.888,80.537)
C3': (107.916,123.460,83.033)
C1': (109.907,123.412,81.775)
O4': (108.888,122.783,81.014)
C5': (106.495,122.579,81.092)
P: (105.409,124.124,79.291)
O2: (112.145,124.767,82.401)
C4': (107.767,122.477,81.883)
C2': (109.425,123.486,83.220)
O2': (109.923,122.339,83.859)
N1: (110.214,124.744,81.215)
N3: (111.738,126.554,81.077)
N4: (111.301,128.325,79.709)
C6: (109.367,125.374,80.347)
C5: (109.679,126.568,79.827)
O3': (107.241,123.015,84.202)
Image (generated by PyMOL):