ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C35:C86

Extra

PDB:
ATOM 1 O3' G A 34 -20.904 26.955 3.587 1.00 99.94 O
ATOM 2 P A A 35 -21.413 27.012 5.105 1.00108.59 P
ATOM 3 OP1 A A 35 -22.883 27.170 5.067 1.00104.48 O
ATOM 4 OP2 A A 35 -20.588 28.016 5.813 1.00 94.44 O
ATOM 5 O5' A A 35 -21.059 25.566 5.698 1.00 80.98 O
ATOM 6 C5' A A 35 -22.022 24.867 6.488 1.00 76.81 C
ATOM 7 C4' A A 35 -21.699 24.857 7.972 1.00 68.21 C
ATOM 8 O4' A A 35 -20.461 24.136 8.204 1.00 64.86 O
ATOM 9 C3' A A 35 -21.494 26.218 8.620 1.00 62.45 C
ATOM 10 O3' A A 35 -22.745 26.757 9.021 1.00 64.15 O
ATOM 11 C2' A A 35 -20.624 25.833 9.810 1.00 65.91 C
ATOM 12 O2' A A 35 -21.355 25.193 10.839 1.00 58.18 O
ATOM 13 C1' A A 35 -19.678 24.843 9.142 1.00 63.43 C
ATOM 14 N9 A A 35 -18.594 25.498 8.421 1.00 59.76 N
ATOM 15 C8 A A 35 -18.503 25.704 7.073 1.00 59.20 C
ATOM 16 N7 A A 35 -17.409 26.329 6.708 1.00 61.30 N
ATOM 17 C5 A A 35 -16.738 26.549 7.899 1.00 54.13 C
ATOM 18 C6 A A 35 -15.511 27.170 8.197 1.00 56.83 C
ATOM 19 N6 A A 35 -14.708 27.703 7.271 1.00 66.43 N
ATOM 20 N1 A A 35 -15.137 27.221 9.491 1.00 56.78 N
ATOM 21 C2 A A 35 -15.938 26.687 10.419 1.00 53.84 C
ATOM 22 N3 A A 35 -17.111 26.080 10.260 1.00 57.74 N
ATOM 23 C4 A A 35 -17.456 26.044 8.964 1.00 57.22 C
ATOM 24 P C A 36 -22.791 28.135 9.826 1.00 66.10 P
ATOM 25 OP1 C A 36 -24.173 28.659 9.778 1.00 61.22 O
ATOM 26 OP2 C A 36 -21.667 28.977 9.361 1.00 66.20 O
ATOM 27 O5' C A 36 -22.513 27.621 11.316 1.00 66.64 O
TER

ATOM 1 O3' C B 85 -9.423 30.582 4.163 1.00 98.64 O
ATOM 2 P A B 86 -10.531 29.494 3.763 1.00 93.58 P
ATOM 3 OP1 A B 86 -10.044 28.653 2.646 1.00 93.18 O
ATOM 4 OP2 A B 86 -11.824 30.203 3.640 1.00 84.69 O
ATOM 5 O5' A B 86 -10.556 28.593 5.085 1.00 83.14 O
ATOM 6 C5' A B 86 -10.429 29.229 6.356 1.00 72.99 C
ATOM 7 C4' A B 86 -10.333 28.223 7.492 1.00 76.00 C
ATOM 8 O4' A B 86 -11.579 27.484 7.588 1.00 73.14 O
ATOM 9 C3' A B 86 -9.241 27.168 7.356 1.00 71.81 C
ATOM 10 O3' A B 86 -8.779 26.777 8.643 1.00 66.98 O
ATOM 11 C2' A B 86 -9.990 26.023 6.682 1.00 69.89 C
ATOM 12 O2' A B 86 -9.390 24.764 6.912 1.00 71.08 O
ATOM 13 C1' A B 86 -11.324 26.105 7.410 1.00 65.31 C
ATOM 14 N9 A B 86 -12.439 25.531 6.667 1.00 63.66 N
ATOM 15 C8 A B 86 -12.723 25.695 5.339 1.00 69.27 C
ATOM 16 N7 A B 86 -13.802 25.057 4.947 1.00 64.89 N
ATOM 17 C5 A B 86 -14.255 24.435 6.098 1.00 55.80 C
ATOM 18 C6 A B 86 -15.361 23.603 6.355 1.00 53.57 C
ATOM 19 N6 A B 86 -16.246 23.244 5.420 1.00 54.66 N
ATOM 20 N1 A B 86 -15.521 23.154 7.615 1.00 56.89 N
ATOM 21 C2 A B 86 -14.636 23.514 8.550 1.00 56.03 C
ATOM 22 N3 A B 86 -13.560 24.289 8.429 1.00 56.76 N
ATOM 23 C4 A B 86 -13.427 24.719 7.167 1.00 57.81 C
ATOM 24 P G B 87 -7.723 27.666 9.455 1.00 72.98 P
ATOM 25 OP1 G B 87 -8.249 29.043 9.572 1.00 62.55 O
ATOM 26 OP2 G B 87 -6.388 27.450 8.858 1.00 79.73 O
ATOM 27 O5' G B 87 -7.757 26.994 10.907 1.00 70.02 O
TER

Atoms:
OP1: (-22.883,27.170,5.067)
OP2: (-20.588,28.016,5.813)
C3': (-21.494,26.218,8.620)
C1': (-19.678,24.843,9.142)
C5': (-22.022,24.867,6.488)
O4': (-20.461,24.136,8.204)
C8: (-18.503,25.704,7.073)
O2': (-21.355,25.193,10.839)
C6: (-15.511,27.170,8.197)
C5: (-16.738,26.549,7.899)
C4: (-17.456,26.044,8.964)
P: (-21.413,27.012,5.105)
C4': (-21.699,24.857,7.972)
C2': (-20.624,25.833,9.810)
C2: (-15.938,26.687,10.419)
N1: (-15.137,27.221,9.491)
N3: (-17.111,26.080,10.260)
N6: (-14.708,27.703,7.271)
N7: (-17.409,26.329,6.708)
N9: (-18.594,25.498,8.421)
O5': (-21.059,25.566,5.698)
O3': (-22.745,26.757,9.021)
OP1: (-10.044,28.653,2.646)
OP2: (-11.824,30.203,3.640)
C3': (-9.241,27.168,7.356)
C1': (-11.324,26.105,7.410)
C5': (-10.429,29.229,6.356)
O4': (-11.579,27.484,7.588)
C8: (-12.723,25.695,5.339)
O2': (-9.390,24.764,6.912)
C6: (-15.361,23.603,6.355)
C5: (-14.255,24.435,6.098)
C4: (-13.427,24.719,7.167)
P: (-10.531,29.494,3.763)
C4': (-10.333,28.223,7.492)
C2': (-9.990,26.023,6.682)
C2: (-14.636,23.514,8.550)
N1: (-15.521,23.154,7.615)
N3: (-13.560,24.289,8.429)
N6: (-16.246,23.244,5.420)
N7: (-13.802,25.057,4.947)
N9: (-12.439,25.531,6.667)
O5': (-10.556,28.593,5.085)
O3': (-8.779,26.777,8.643)
Image (generated by PyMOL):
PyMOL image
show in jmol