Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2187:A2186
Extra
PDB:
ATOM 1 O3' A A2186 96.063 42.980 105.378 1.00106.98 O
ATOM 2 P C A2187 95.056 41.862 104.795 1.00105.12 P
ATOM 3 OP1 C A2187 94.714 42.301 103.421 1.00104.72 O
ATOM 4 OP2 C A2187 93.968 41.645 105.784 1.00105.22 O
ATOM 5 O5' C A2187 95.922 40.529 104.712 1.00102.46 O
ATOM 6 C5' C A2187 96.307 39.949 103.454 1.00 98.83 C
ATOM 7 C4' C A2187 96.768 38.534 103.681 1.00 96.36 C
ATOM 8 O4' C A2187 97.695 38.555 104.801 1.00 95.17 O
ATOM 9 C3' C A2187 95.677 37.563 104.115 1.00 95.53 C
ATOM 10 O3' C A2187 95.003 37.002 102.986 1.00 94.34 O
ATOM 11 C2' C A2187 96.468 36.530 104.907 1.00 95.06 C
ATOM 12 O2' C A2187 97.171 35.612 104.094 1.00 94.47 O
ATOM 13 C1' C A2187 97.474 37.426 105.632 1.00 94.92 C
ATOM 14 N1 C A2187 96.971 37.905 106.935 1.00 94.62 N
ATOM 15 C2 C A2187 97.158 37.104 108.094 1.00 94.70 C
ATOM 16 O2 C A2187 97.764 36.022 107.999 1.00 93.05 O
ATOM 17 N3 C A2187 96.673 37.548 109.281 1.00 94.92 N
ATOM 18 C4 C A2187 96.035 38.727 109.344 1.00 94.96 C
ATOM 19 N4 C A2187 95.565 39.130 110.530 1.00 94.63 N
ATOM 20 C5 C A2187 95.849 39.550 108.193 1.00 94.36 C
ATOM 21 C6 C A2187 96.324 39.107 107.027 1.00 94.16 C
ATOM 22 P C A2188 93.545 36.335 103.160 1.00 93.63 P
ATOM 23 OP1 C A2188 93.161 35.803 101.818 1.00 93.47 O
ATOM 24 OP2 C A2188 92.646 37.302 103.856 1.00 93.52 O
ATOM 25 O5' C A2188 93.782 35.089 104.126 1.00 90.58 O
TER
ATOM 1 P A B2186 95.589 42.993 110.288 1.00113.37 P
ATOM 2 OP1 A B2186 94.588 42.299 109.442 1.00114.07 O
ATOM 3 OP2 A B2186 96.180 42.288 111.449 1.00113.87 O
ATOM 4 O5' A B2186 96.773 43.515 109.365 1.00111.97 O
ATOM 5 C5' A B2186 96.533 44.374 108.243 1.00109.74 C
ATOM 6 C4' A B2186 97.408 43.951 107.089 1.00109.30 C
ATOM 7 O4' A B2186 98.741 43.683 107.594 1.00110.07 O
ATOM 8 C3' A B2186 97.008 42.655 106.400 1.00108.96 C
ATOM 9 O3' A B2186 96.063 42.980 105.378 1.00106.98 O
ATOM 10 C2' A B2186 98.324 42.184 105.786 1.00110.02 C
ATOM 11 O2' A B2186 98.602 42.826 104.559 1.00110.36 O
ATOM 12 C1' A B2186 99.346 42.661 106.823 1.00110.78 C
ATOM 13 N9 A B2186 99.854 41.629 107.725 1.00112.18 N
ATOM 14 C8 A B2186 99.187 41.003 108.751 1.00113.01 C
ATOM 15 N7 A B2186 99.917 40.131 109.402 1.00113.62 N
ATOM 16 C5 A B2186 101.149 40.181 108.761 1.00113.26 C
ATOM 17 C6 A B2186 102.363 39.494 108.982 1.00113.00 C
ATOM 18 N6 A B2186 102.537 38.593 109.955 1.00112.48 N
ATOM 19 N1 A B2186 103.401 39.772 108.161 1.00112.63 N
ATOM 20 C2 A B2186 103.224 40.682 107.192 1.00112.69 C
ATOM 21 N3 A B2186 102.137 41.396 106.889 1.00112.60 N
ATOM 22 C4 A B2186 101.123 41.095 107.721 1.00112.87 C
ATOM 23 P C B2187 95.056 41.862 104.795 1.00105.12 P
ATOM 24 OP1 C B2187 94.714 42.301 103.421 1.00104.72 O
ATOM 25 OP2 C B2187 93.968 41.645 105.784 1.00105.22 O
ATOM 26 O5' C B2187 95.922 40.529 104.712 1.00102.46 O
TER
ATOM 2 P C A2187 95.056 41.862 104.795 1.00105.12 P
ATOM 3 OP1 C A2187 94.714 42.301 103.421 1.00104.72 O
ATOM 4 OP2 C A2187 93.968 41.645 105.784 1.00105.22 O
ATOM 5 O5' C A2187 95.922 40.529 104.712 1.00102.46 O
ATOM 6 C5' C A2187 96.307 39.949 103.454 1.00 98.83 C
ATOM 7 C4' C A2187 96.768 38.534 103.681 1.00 96.36 C
ATOM 8 O4' C A2187 97.695 38.555 104.801 1.00 95.17 O
ATOM 9 C3' C A2187 95.677 37.563 104.115 1.00 95.53 C
ATOM 10 O3' C A2187 95.003 37.002 102.986 1.00 94.34 O
ATOM 11 C2' C A2187 96.468 36.530 104.907 1.00 95.06 C
ATOM 12 O2' C A2187 97.171 35.612 104.094 1.00 94.47 O
ATOM 13 C1' C A2187 97.474 37.426 105.632 1.00 94.92 C
ATOM 14 N1 C A2187 96.971 37.905 106.935 1.00 94.62 N
ATOM 15 C2 C A2187 97.158 37.104 108.094 1.00 94.70 C
ATOM 16 O2 C A2187 97.764 36.022 107.999 1.00 93.05 O
ATOM 17 N3 C A2187 96.673 37.548 109.281 1.00 94.92 N
ATOM 18 C4 C A2187 96.035 38.727 109.344 1.00 94.96 C
ATOM 19 N4 C A2187 95.565 39.130 110.530 1.00 94.63 N
ATOM 20 C5 C A2187 95.849 39.550 108.193 1.00 94.36 C
ATOM 21 C6 C A2187 96.324 39.107 107.027 1.00 94.16 C
ATOM 22 P C A2188 93.545 36.335 103.160 1.00 93.63 P
ATOM 23 OP1 C A2188 93.161 35.803 101.818 1.00 93.47 O
ATOM 24 OP2 C A2188 92.646 37.302 103.856 1.00 93.52 O
ATOM 25 O5' C A2188 93.782 35.089 104.126 1.00 90.58 O
TER
ATOM 1 P A B2186 95.589 42.993 110.288 1.00113.37 P
ATOM 2 OP1 A B2186 94.588 42.299 109.442 1.00114.07 O
ATOM 3 OP2 A B2186 96.180 42.288 111.449 1.00113.87 O
ATOM 4 O5' A B2186 96.773 43.515 109.365 1.00111.97 O
ATOM 5 C5' A B2186 96.533 44.374 108.243 1.00109.74 C
ATOM 6 C4' A B2186 97.408 43.951 107.089 1.00109.30 C
ATOM 7 O4' A B2186 98.741 43.683 107.594 1.00110.07 O
ATOM 8 C3' A B2186 97.008 42.655 106.400 1.00108.96 C
ATOM 9 O3' A B2186 96.063 42.980 105.378 1.00106.98 O
ATOM 10 C2' A B2186 98.324 42.184 105.786 1.00110.02 C
ATOM 11 O2' A B2186 98.602 42.826 104.559 1.00110.36 O
ATOM 12 C1' A B2186 99.346 42.661 106.823 1.00110.78 C
ATOM 13 N9 A B2186 99.854 41.629 107.725 1.00112.18 N
ATOM 14 C8 A B2186 99.187 41.003 108.751 1.00113.01 C
ATOM 15 N7 A B2186 99.917 40.131 109.402 1.00113.62 N
ATOM 16 C5 A B2186 101.149 40.181 108.761 1.00113.26 C
ATOM 17 C6 A B2186 102.363 39.494 108.982 1.00113.00 C
ATOM 18 N6 A B2186 102.537 38.593 109.955 1.00112.48 N
ATOM 19 N1 A B2186 103.401 39.772 108.161 1.00112.63 N
ATOM 20 C2 A B2186 103.224 40.682 107.192 1.00112.69 C
ATOM 21 N3 A B2186 102.137 41.396 106.889 1.00112.60 N
ATOM 22 C4 A B2186 101.123 41.095 107.721 1.00112.87 C
ATOM 23 P C B2187 95.056 41.862 104.795 1.00105.12 P
ATOM 24 OP1 C B2187 94.714 42.301 103.421 1.00104.72 O
ATOM 25 OP2 C B2187 93.968 41.645 105.784 1.00105.22 O
ATOM 26 O5' C B2187 95.922 40.529 104.712 1.00102.46 O
TER
Atoms:
C2: (97.158,37.104,108.094)
OP1: (94.714,42.301,103.421)
OP2: (93.968,41.645,105.784)
C4: (96.035,38.727,109.344)
O5': (95.922,40.529,104.712)
C3': (95.677,37.563,104.115)
C1': (97.474,37.426,105.632)
O4': (97.695,38.555,104.801)
C5': (96.307,39.949,103.454)
P: (95.056,41.862,104.795)
O2: (97.764,36.022,107.999)
C4': (96.768,38.534,103.681)
C2': (96.468,36.530,104.907)
O2': (97.171,35.612,104.094)
N1: (96.971,37.905,106.935)
N3: (96.673,37.548,109.281)
N4: (95.565,39.130,110.530)
C6: (96.324,39.107,107.027)
C5: (95.849,39.550,108.193)
O3': (95.003,37.002,102.986)
OP1: (94.714,42.301,103.421)
OP2: (93.968,41.645,105.784)
C4: (96.035,38.727,109.344)
O5': (95.922,40.529,104.712)
C3': (95.677,37.563,104.115)
C1': (97.474,37.426,105.632)
O4': (97.695,38.555,104.801)
C5': (96.307,39.949,103.454)
P: (95.056,41.862,104.795)
O2: (97.764,36.022,107.999)
C4': (96.768,38.534,103.681)
C2': (96.468,36.530,104.907)
O2': (97.171,35.612,104.094)
N1: (96.971,37.905,106.935)
N3: (96.673,37.548,109.281)
N4: (95.565,39.130,110.530)
C6: (96.324,39.107,107.027)
C5: (95.849,39.550,108.193)
O3': (95.003,37.002,102.986)
OP1: (94.588,42.299,109.442)
OP2: (96.180,42.288,111.449)
C3': (97.008,42.655,106.400)
C1': (99.346,42.661,106.823)
C5': (96.533,44.374,108.243)
O4': (98.741,43.683,107.594)
C8: (99.187,41.003,108.751)
O2': (98.602,42.826,104.559)
C6: (102.363,39.494,108.982)
C5: (101.149,40.181,108.761)
C4: (101.123,41.095,107.721)
P: (95.589,42.993,110.288)
C4': (97.408,43.951,107.089)
C2': (98.324,42.184,105.786)
C2: (103.224,40.682,107.192)
N1: (103.401,39.772,108.161)
N3: (102.137,41.396,106.889)
N6: (102.537,38.593,109.955)
N7: (99.917,40.131,109.402)
N9: (99.854,41.629,107.725)
O5': (96.773,43.515,109.365)
O3': (96.063,42.980,105.378)
OP2: (96.180,42.288,111.449)
C3': (97.008,42.655,106.400)
C1': (99.346,42.661,106.823)
C5': (96.533,44.374,108.243)
O4': (98.741,43.683,107.594)
C8: (99.187,41.003,108.751)
O2': (98.602,42.826,104.559)
C6: (102.363,39.494,108.982)
C5: (101.149,40.181,108.761)
C4: (101.123,41.095,107.721)
P: (95.589,42.993,110.288)
C4': (97.408,43.951,107.089)
C2': (98.324,42.184,105.786)
C2: (103.224,40.682,107.192)
N1: (103.401,39.772,108.161)
N3: (102.137,41.396,106.889)
N6: (102.537,38.593,109.955)
N7: (99.917,40.131,109.402)
N9: (99.854,41.629,107.725)
O5': (96.773,43.515,109.365)
O3': (96.063,42.980,105.378)
Image (generated by PyMOL):