Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61250:61220
Extra
PDB:
ATOM 1 O3' G A1249 243.028 -25.109 326.456 1.00148.42 O
ATOM 2 P A A1250 243.993 -24.827 325.171 1.00190.57 P
ATOM 3 OP1 A A1250 244.188 -26.106 324.446 1.00189.64 O
ATOM 4 OP2 A A1250 245.195 -24.131 325.693 1.00191.00 O
ATOM 5 O5' A A1250 243.154 -23.814 324.274 1.00190.40 O
ATOM 6 C5' A A1250 243.731 -22.577 323.867 1.00190.42 C
ATOM 7 C4' A A1250 242.967 -21.930 322.742 1.00189.96 C
ATOM 8 O4' A A1250 241.541 -22.050 323.001 1.00190.34 O
ATOM 9 C3' A A1250 243.246 -20.435 322.553 1.00190.27 C
ATOM 10 O3' A A1250 243.168 -20.099 321.170 1.00189.44 O
ATOM 11 C2' A A1250 242.090 -19.778 323.295 1.00191.20 C
ATOM 12 O2' A A1250 241.780 -18.470 322.852 1.00191.38 O
ATOM 13 C1' A A1250 240.951 -20.761 323.015 1.00190.88 C
ATOM 14 N9 A A1250 239.882 -20.745 324.025 1.00191.82 N
ATOM 15 C8 A A1250 239.587 -21.688 324.986 1.00192.26 C
ATOM 16 N7 A A1250 238.561 -21.381 325.743 1.00193.14 N
ATOM 17 C5 A A1250 238.147 -20.152 325.243 1.00193.29 C
ATOM 18 C6 A A1250 237.103 -19.290 325.611 1.00194.12 C
ATOM 19 N6 A A1250 236.256 -19.559 326.608 1.00194.99 N
ATOM 20 N1 A A1250 236.957 -18.138 324.916 1.00194.04 N
ATOM 21 C2 A A1250 237.806 -17.873 323.914 1.00193.18 C
ATOM 22 N3 A A1250 238.826 -18.604 323.470 1.00192.37 N
ATOM 23 C4 A A1250 238.940 -19.748 324.181 1.00192.47 C
ATOM 24 P U A1251 244.419 -20.368 320.206 1.00144.35 P
ATOM 25 OP1 U A1251 245.640 -20.267 321.051 1.00144.80 O
ATOM 26 OP2 U A1251 244.273 -19.452 319.043 1.00143.87 O
ATOM 27 O5' U A1251 244.184 -21.897 319.749 1.00143.60 O
TER
ATOM 1 O3' U B1219 229.520 -12.525 324.714 1.00191.00 O
ATOM 2 P A B1220 230.281 -13.271 325.912 1.00166.57 P
ATOM 3 OP1 A B1220 229.367 -13.274 327.075 1.00167.83 O
ATOM 4 OP2 A B1220 231.610 -12.633 326.054 1.00166.46 O
ATOM 5 O5' A B1220 230.444 -14.745 325.346 1.00165.51 O
ATOM 6 C5' A B1220 230.394 -15.866 326.204 1.00165.78 C
ATOM 7 C4' A B1220 231.720 -16.568 326.244 1.00165.09 C
ATOM 8 O4' A B1220 232.382 -16.425 324.968 1.00163.94 O
ATOM 9 C3' A B1220 232.718 -16.028 327.251 1.00165.74 C
ATOM 10 O3' A B1220 232.515 -16.572 328.537 1.00166.62 O
ATOM 11 C2' A B1220 234.073 -16.395 326.652 1.00164.72 C
ATOM 12 O2' A B1220 234.459 -17.699 327.061 1.00164.43 O
ATOM 13 C1' A B1220 233.778 -16.425 325.149 1.00163.64 C
ATOM 14 N9 A B1220 234.359 -15.284 324.402 1.00163.31 N
ATOM 15 C8 A B1220 233.758 -14.772 323.282 1.00162.83 C
ATOM 16 N7 A B1220 234.423 -13.804 322.720 1.00162.56 N
ATOM 17 C5 A B1220 235.560 -13.663 323.490 1.00162.88 C
ATOM 18 C6 A B1220 236.650 -12.781 323.375 1.00162.82 C
ATOM 19 N6 A B1220 236.770 -11.859 322.418 1.00162.41 N
ATOM 20 N1 A B1220 237.626 -12.881 324.293 1.00163.24 N
ATOM 21 C2 A B1220 237.492 -13.813 325.238 1.00163.65 C
ATOM 22 N3 A B1220 236.523 -14.699 325.460 1.00163.73 N
ATOM 23 C4 A B1220 235.554 -14.582 324.532 1.00163.33 C
ATOM 24 P A B1221 232.802 -15.687 329.839 1.00195.69 P
ATOM 25 OP1 A B1221 232.074 -16.326 330.967 1.00196.60 O
ATOM 26 OP2 A B1221 232.487 -14.277 329.486 1.00196.06 O
ATOM 27 O5' A B1221 234.371 -15.859 330.039 1.00195.29 O
TER
ATOM 2 P A A1250 243.993 -24.827 325.171 1.00190.57 P
ATOM 3 OP1 A A1250 244.188 -26.106 324.446 1.00189.64 O
ATOM 4 OP2 A A1250 245.195 -24.131 325.693 1.00191.00 O
ATOM 5 O5' A A1250 243.154 -23.814 324.274 1.00190.40 O
ATOM 6 C5' A A1250 243.731 -22.577 323.867 1.00190.42 C
ATOM 7 C4' A A1250 242.967 -21.930 322.742 1.00189.96 C
ATOM 8 O4' A A1250 241.541 -22.050 323.001 1.00190.34 O
ATOM 9 C3' A A1250 243.246 -20.435 322.553 1.00190.27 C
ATOM 10 O3' A A1250 243.168 -20.099 321.170 1.00189.44 O
ATOM 11 C2' A A1250 242.090 -19.778 323.295 1.00191.20 C
ATOM 12 O2' A A1250 241.780 -18.470 322.852 1.00191.38 O
ATOM 13 C1' A A1250 240.951 -20.761 323.015 1.00190.88 C
ATOM 14 N9 A A1250 239.882 -20.745 324.025 1.00191.82 N
ATOM 15 C8 A A1250 239.587 -21.688 324.986 1.00192.26 C
ATOM 16 N7 A A1250 238.561 -21.381 325.743 1.00193.14 N
ATOM 17 C5 A A1250 238.147 -20.152 325.243 1.00193.29 C
ATOM 18 C6 A A1250 237.103 -19.290 325.611 1.00194.12 C
ATOM 19 N6 A A1250 236.256 -19.559 326.608 1.00194.99 N
ATOM 20 N1 A A1250 236.957 -18.138 324.916 1.00194.04 N
ATOM 21 C2 A A1250 237.806 -17.873 323.914 1.00193.18 C
ATOM 22 N3 A A1250 238.826 -18.604 323.470 1.00192.37 N
ATOM 23 C4 A A1250 238.940 -19.748 324.181 1.00192.47 C
ATOM 24 P U A1251 244.419 -20.368 320.206 1.00144.35 P
ATOM 25 OP1 U A1251 245.640 -20.267 321.051 1.00144.80 O
ATOM 26 OP2 U A1251 244.273 -19.452 319.043 1.00143.87 O
ATOM 27 O5' U A1251 244.184 -21.897 319.749 1.00143.60 O
TER
ATOM 1 O3' U B1219 229.520 -12.525 324.714 1.00191.00 O
ATOM 2 P A B1220 230.281 -13.271 325.912 1.00166.57 P
ATOM 3 OP1 A B1220 229.367 -13.274 327.075 1.00167.83 O
ATOM 4 OP2 A B1220 231.610 -12.633 326.054 1.00166.46 O
ATOM 5 O5' A B1220 230.444 -14.745 325.346 1.00165.51 O
ATOM 6 C5' A B1220 230.394 -15.866 326.204 1.00165.78 C
ATOM 7 C4' A B1220 231.720 -16.568 326.244 1.00165.09 C
ATOM 8 O4' A B1220 232.382 -16.425 324.968 1.00163.94 O
ATOM 9 C3' A B1220 232.718 -16.028 327.251 1.00165.74 C
ATOM 10 O3' A B1220 232.515 -16.572 328.537 1.00166.62 O
ATOM 11 C2' A B1220 234.073 -16.395 326.652 1.00164.72 C
ATOM 12 O2' A B1220 234.459 -17.699 327.061 1.00164.43 O
ATOM 13 C1' A B1220 233.778 -16.425 325.149 1.00163.64 C
ATOM 14 N9 A B1220 234.359 -15.284 324.402 1.00163.31 N
ATOM 15 C8 A B1220 233.758 -14.772 323.282 1.00162.83 C
ATOM 16 N7 A B1220 234.423 -13.804 322.720 1.00162.56 N
ATOM 17 C5 A B1220 235.560 -13.663 323.490 1.00162.88 C
ATOM 18 C6 A B1220 236.650 -12.781 323.375 1.00162.82 C
ATOM 19 N6 A B1220 236.770 -11.859 322.418 1.00162.41 N
ATOM 20 N1 A B1220 237.626 -12.881 324.293 1.00163.24 N
ATOM 21 C2 A B1220 237.492 -13.813 325.238 1.00163.65 C
ATOM 22 N3 A B1220 236.523 -14.699 325.460 1.00163.73 N
ATOM 23 C4 A B1220 235.554 -14.582 324.532 1.00163.33 C
ATOM 24 P A B1221 232.802 -15.687 329.839 1.00195.69 P
ATOM 25 OP1 A B1221 232.074 -16.326 330.967 1.00196.60 O
ATOM 26 OP2 A B1221 232.487 -14.277 329.486 1.00196.06 O
ATOM 27 O5' A B1221 234.371 -15.859 330.039 1.00195.29 O
TER
Atoms:
OP1: (244.188,-26.106,324.446)
OP2: (245.195,-24.131,325.693)
C3': (243.246,-20.435,322.553)
C1': (240.951,-20.761,323.015)
C5': (243.731,-22.577,323.867)
O4': (241.541,-22.050,323.001)
C8: (239.587,-21.688,324.986)
O2': (241.780,-18.470,322.852)
C6: (237.103,-19.290,325.611)
C5: (238.147,-20.152,325.243)
C4: (238.940,-19.748,324.181)
P: (243.993,-24.827,325.171)
C4': (242.967,-21.930,322.742)
C2': (242.090,-19.778,323.295)
C2: (237.806,-17.873,323.914)
N1: (236.957,-18.138,324.916)
N3: (238.826,-18.604,323.470)
N6: (236.256,-19.559,326.608)
N7: (238.561,-21.381,325.743)
N9: (239.882,-20.745,324.025)
O5': (243.154,-23.814,324.274)
O3': (243.168,-20.099,321.170)
OP2: (245.195,-24.131,325.693)
C3': (243.246,-20.435,322.553)
C1': (240.951,-20.761,323.015)
C5': (243.731,-22.577,323.867)
O4': (241.541,-22.050,323.001)
C8: (239.587,-21.688,324.986)
O2': (241.780,-18.470,322.852)
C6: (237.103,-19.290,325.611)
C5: (238.147,-20.152,325.243)
C4: (238.940,-19.748,324.181)
P: (243.993,-24.827,325.171)
C4': (242.967,-21.930,322.742)
C2': (242.090,-19.778,323.295)
C2: (237.806,-17.873,323.914)
N1: (236.957,-18.138,324.916)
N3: (238.826,-18.604,323.470)
N6: (236.256,-19.559,326.608)
N7: (238.561,-21.381,325.743)
N9: (239.882,-20.745,324.025)
O5': (243.154,-23.814,324.274)
O3': (243.168,-20.099,321.170)
OP1: (229.367,-13.274,327.075)
OP2: (231.610,-12.633,326.054)
C3': (232.718,-16.028,327.251)
C1': (233.778,-16.425,325.149)
C5': (230.394,-15.866,326.204)
O4': (232.382,-16.425,324.968)
C8: (233.758,-14.772,323.282)
O2': (234.459,-17.699,327.061)
C6: (236.650,-12.781,323.375)
C5: (235.560,-13.663,323.490)
C4: (235.554,-14.582,324.532)
P: (230.281,-13.271,325.912)
C4': (231.720,-16.568,326.244)
C2': (234.073,-16.395,326.652)
C2: (237.492,-13.813,325.238)
N1: (237.626,-12.881,324.293)
N3: (236.523,-14.699,325.460)
N6: (236.770,-11.859,322.418)
N7: (234.423,-13.804,322.720)
N9: (234.359,-15.284,324.402)
O5': (230.444,-14.745,325.346)
O3': (232.515,-16.572,328.537)
OP2: (231.610,-12.633,326.054)
C3': (232.718,-16.028,327.251)
C1': (233.778,-16.425,325.149)
C5': (230.394,-15.866,326.204)
O4': (232.382,-16.425,324.968)
C8: (233.758,-14.772,323.282)
O2': (234.459,-17.699,327.061)
C6: (236.650,-12.781,323.375)
C5: (235.560,-13.663,323.490)
C4: (235.554,-14.582,324.532)
P: (230.281,-13.271,325.912)
C4': (231.720,-16.568,326.244)
C2': (234.073,-16.395,326.652)
C2: (237.492,-13.813,325.238)
N1: (237.626,-12.881,324.293)
N3: (236.523,-14.699,325.460)
N6: (236.770,-11.859,322.418)
N7: (234.423,-13.804,322.720)
N9: (234.359,-15.284,324.402)
O5': (230.444,-14.745,325.346)
O3': (232.515,-16.572,328.537)
Image (generated by PyMOL):