Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01127:01133
Extra
PDB:
ATOM 1 O3' G A1126 81.241 72.931 186.475 1.00125.65 O
ATOM 2 P C A1127 82.540 73.871 186.573 1.00126.77 P
ATOM 3 OP1 C A1127 83.542 73.146 187.401 1.00126.66 O
ATOM 4 OP2 C A1127 82.114 75.240 186.968 1.00126.22 O
ATOM 5 O5' C A1127 83.077 73.922 185.075 1.00127.54 O
ATOM 6 C5' C A1127 83.518 72.723 184.409 1.00128.90 C
ATOM 7 C4' C A1127 83.706 72.983 182.934 1.00130.11 C
ATOM 8 O4' C A1127 82.426 73.303 182.328 1.00129.79 O
ATOM 9 C3' C A1127 84.580 74.176 182.586 1.00131.41 C
ATOM 10 O3' C A1127 85.971 73.869 182.667 1.00134.06 O
ATOM 11 C2' C A1127 84.120 74.502 181.172 1.00130.67 C
ATOM 12 O2' C A1127 84.656 73.624 180.204 1.00129.74 O
ATOM 13 C1' C A1127 82.615 74.253 181.288 1.00129.99 C
ATOM 14 N1 C A1127 81.844 75.474 181.608 1.00129.93 N
ATOM 15 C2 C A1127 81.492 76.350 180.563 1.00129.76 C
ATOM 16 O2 C A1127 81.839 76.078 179.399 1.00128.98 O
ATOM 17 N3 C A1127 80.783 77.469 180.850 1.00130.03 N
ATOM 18 C4 C A1127 80.427 77.731 182.111 1.00130.06 C
ATOM 19 N4 C A1127 79.723 78.844 182.345 1.00129.70 N
ATOM 20 C5 C A1127 80.773 76.862 183.189 1.00129.97 C
ATOM 21 C6 C A1127 81.474 75.758 182.896 1.00129.91 C
ATOM 22 P U A1128 87.015 75.011 183.116 1.00135.41 P
ATOM 23 OP1 U A1128 88.377 74.412 183.116 1.00135.14 O
ATOM 24 OP2 U A1128 86.495 75.650 184.357 1.00134.68 O
ATOM 25 O5' U A1128 86.936 76.082 181.938 1.00136.04 O
TER
ATOM 1 O3' A B1132 77.551 83.246 183.869 1.00149.36 O
ATOM 2 P A B1133 77.344 81.681 183.557 1.00148.83 P
ATOM 3 OP1 A B1133 78.266 80.919 184.439 1.00148.81 O
ATOM 4 OP2 A B1133 77.387 81.461 182.086 1.00148.71 O
ATOM 5 O5' A B1133 75.853 81.428 184.057 1.00148.12 O
ATOM 6 C5' A B1133 74.797 82.357 183.728 1.00146.71 C
ATOM 7 C4' A B1133 74.198 82.942 184.988 1.00145.68 C
ATOM 8 O4' A B1133 75.185 83.748 185.674 1.00145.39 O
ATOM 9 C3' A B1133 73.074 83.944 184.776 1.00145.01 C
ATOM 10 O3' A B1133 71.856 83.241 184.529 1.00142.91 O
ATOM 11 C2' A B1133 73.042 84.698 186.107 1.00145.51 C
ATOM 12 O2' A B1133 72.254 84.060 187.088 1.00146.45 O
ATOM 13 C1' A B1133 74.512 84.647 186.538 1.00145.77 C
ATOM 14 N9 A B1133 75.209 85.933 186.543 1.00146.14 N
ATOM 15 C8 A B1133 76.002 86.489 185.568 1.00146.46 C
ATOM 16 N7 A B1133 76.504 87.655 185.899 1.00146.53 N
ATOM 17 C5 A B1133 76.004 87.885 187.173 1.00146.40 C
ATOM 18 C6 A B1133 76.167 88.951 188.076 1.00146.26 C
ATOM 19 N6 A B1133 76.916 90.026 187.824 1.00146.72 N
ATOM 20 N1 A B1133 75.527 88.872 189.264 1.00146.14 N
ATOM 21 C2 A B1133 74.778 87.793 189.517 1.00146.11 C
ATOM 22 N3 A B1133 74.549 86.728 188.752 1.00146.10 N
ATOM 23 C4 A B1133 75.199 86.837 187.580 1.00146.37 C
ATOM 24 P G B1134 70.459 84.034 184.467 1.00140.92 P
ATOM 25 OP1 G B1134 70.730 85.473 184.209 1.00141.36 O
ATOM 26 OP2 G B1134 69.679 83.639 185.670 1.00140.21 O
ATOM 27 O5' G B1134 69.737 83.419 183.186 1.00140.13 O
TER
ATOM 2 P C A1127 82.540 73.871 186.573 1.00126.77 P
ATOM 3 OP1 C A1127 83.542 73.146 187.401 1.00126.66 O
ATOM 4 OP2 C A1127 82.114 75.240 186.968 1.00126.22 O
ATOM 5 O5' C A1127 83.077 73.922 185.075 1.00127.54 O
ATOM 6 C5' C A1127 83.518 72.723 184.409 1.00128.90 C
ATOM 7 C4' C A1127 83.706 72.983 182.934 1.00130.11 C
ATOM 8 O4' C A1127 82.426 73.303 182.328 1.00129.79 O
ATOM 9 C3' C A1127 84.580 74.176 182.586 1.00131.41 C
ATOM 10 O3' C A1127 85.971 73.869 182.667 1.00134.06 O
ATOM 11 C2' C A1127 84.120 74.502 181.172 1.00130.67 C
ATOM 12 O2' C A1127 84.656 73.624 180.204 1.00129.74 O
ATOM 13 C1' C A1127 82.615 74.253 181.288 1.00129.99 C
ATOM 14 N1 C A1127 81.844 75.474 181.608 1.00129.93 N
ATOM 15 C2 C A1127 81.492 76.350 180.563 1.00129.76 C
ATOM 16 O2 C A1127 81.839 76.078 179.399 1.00128.98 O
ATOM 17 N3 C A1127 80.783 77.469 180.850 1.00130.03 N
ATOM 18 C4 C A1127 80.427 77.731 182.111 1.00130.06 C
ATOM 19 N4 C A1127 79.723 78.844 182.345 1.00129.70 N
ATOM 20 C5 C A1127 80.773 76.862 183.189 1.00129.97 C
ATOM 21 C6 C A1127 81.474 75.758 182.896 1.00129.91 C
ATOM 22 P U A1128 87.015 75.011 183.116 1.00135.41 P
ATOM 23 OP1 U A1128 88.377 74.412 183.116 1.00135.14 O
ATOM 24 OP2 U A1128 86.495 75.650 184.357 1.00134.68 O
ATOM 25 O5' U A1128 86.936 76.082 181.938 1.00136.04 O
TER
ATOM 1 O3' A B1132 77.551 83.246 183.869 1.00149.36 O
ATOM 2 P A B1133 77.344 81.681 183.557 1.00148.83 P
ATOM 3 OP1 A B1133 78.266 80.919 184.439 1.00148.81 O
ATOM 4 OP2 A B1133 77.387 81.461 182.086 1.00148.71 O
ATOM 5 O5' A B1133 75.853 81.428 184.057 1.00148.12 O
ATOM 6 C5' A B1133 74.797 82.357 183.728 1.00146.71 C
ATOM 7 C4' A B1133 74.198 82.942 184.988 1.00145.68 C
ATOM 8 O4' A B1133 75.185 83.748 185.674 1.00145.39 O
ATOM 9 C3' A B1133 73.074 83.944 184.776 1.00145.01 C
ATOM 10 O3' A B1133 71.856 83.241 184.529 1.00142.91 O
ATOM 11 C2' A B1133 73.042 84.698 186.107 1.00145.51 C
ATOM 12 O2' A B1133 72.254 84.060 187.088 1.00146.45 O
ATOM 13 C1' A B1133 74.512 84.647 186.538 1.00145.77 C
ATOM 14 N9 A B1133 75.209 85.933 186.543 1.00146.14 N
ATOM 15 C8 A B1133 76.002 86.489 185.568 1.00146.46 C
ATOM 16 N7 A B1133 76.504 87.655 185.899 1.00146.53 N
ATOM 17 C5 A B1133 76.004 87.885 187.173 1.00146.40 C
ATOM 18 C6 A B1133 76.167 88.951 188.076 1.00146.26 C
ATOM 19 N6 A B1133 76.916 90.026 187.824 1.00146.72 N
ATOM 20 N1 A B1133 75.527 88.872 189.264 1.00146.14 N
ATOM 21 C2 A B1133 74.778 87.793 189.517 1.00146.11 C
ATOM 22 N3 A B1133 74.549 86.728 188.752 1.00146.10 N
ATOM 23 C4 A B1133 75.199 86.837 187.580 1.00146.37 C
ATOM 24 P G B1134 70.459 84.034 184.467 1.00140.92 P
ATOM 25 OP1 G B1134 70.730 85.473 184.209 1.00141.36 O
ATOM 26 OP2 G B1134 69.679 83.639 185.670 1.00140.21 O
ATOM 27 O5' G B1134 69.737 83.419 183.186 1.00140.13 O
TER
Atoms:
C2: (81.492,76.350,180.563)
OP1: (83.542,73.146,187.401)
OP2: (82.114,75.240,186.968)
C4: (80.427,77.731,182.111)
O5': (83.077,73.922,185.075)
C3': (84.580,74.176,182.586)
C1': (82.615,74.253,181.288)
O4': (82.426,73.303,182.328)
C5': (83.518,72.723,184.409)
P: (82.540,73.871,186.573)
O2: (81.839,76.078,179.399)
C4': (83.706,72.983,182.934)
C2': (84.120,74.502,181.172)
O2': (84.656,73.624,180.204)
N1: (81.844,75.474,181.608)
N3: (80.783,77.469,180.850)
N4: (79.723,78.844,182.345)
C6: (81.474,75.758,182.896)
C5: (80.773,76.862,183.189)
O3': (85.971,73.869,182.667)
OP1: (83.542,73.146,187.401)
OP2: (82.114,75.240,186.968)
C4: (80.427,77.731,182.111)
O5': (83.077,73.922,185.075)
C3': (84.580,74.176,182.586)
C1': (82.615,74.253,181.288)
O4': (82.426,73.303,182.328)
C5': (83.518,72.723,184.409)
P: (82.540,73.871,186.573)
O2: (81.839,76.078,179.399)
C4': (83.706,72.983,182.934)
C2': (84.120,74.502,181.172)
O2': (84.656,73.624,180.204)
N1: (81.844,75.474,181.608)
N3: (80.783,77.469,180.850)
N4: (79.723,78.844,182.345)
C6: (81.474,75.758,182.896)
C5: (80.773,76.862,183.189)
O3': (85.971,73.869,182.667)
OP1: (78.266,80.919,184.439)
OP2: (77.387,81.461,182.086)
C3': (73.074,83.944,184.776)
C1': (74.512,84.647,186.538)
C5': (74.797,82.357,183.728)
O4': (75.185,83.748,185.674)
C8: (76.002,86.489,185.568)
O2': (72.254,84.060,187.088)
C6: (76.167,88.951,188.076)
C5: (76.004,87.885,187.173)
C4: (75.199,86.837,187.580)
P: (77.344,81.681,183.557)
C4': (74.198,82.942,184.988)
C2': (73.042,84.698,186.107)
C2: (74.778,87.793,189.517)
N1: (75.527,88.872,189.264)
N3: (74.549,86.728,188.752)
N6: (76.916,90.026,187.824)
N7: (76.504,87.655,185.899)
N9: (75.209,85.933,186.543)
O5': (75.853,81.428,184.057)
O3': (71.856,83.241,184.529)
OP2: (77.387,81.461,182.086)
C3': (73.074,83.944,184.776)
C1': (74.512,84.647,186.538)
C5': (74.797,82.357,183.728)
O4': (75.185,83.748,185.674)
C8: (76.002,86.489,185.568)
O2': (72.254,84.060,187.088)
C6: (76.167,88.951,188.076)
C5: (76.004,87.885,187.173)
C4: (75.199,86.837,187.580)
P: (77.344,81.681,183.557)
C4': (74.198,82.942,184.988)
C2': (73.042,84.698,186.107)
C2: (74.778,87.793,189.517)
N1: (75.527,88.872,189.264)
N3: (74.549,86.728,188.752)
N6: (76.916,90.026,187.824)
N7: (76.504,87.655,185.899)
N9: (75.209,85.933,186.543)
O5': (75.853,81.428,184.057)
O3': (71.856,83.241,184.529)
Image (generated by PyMOL):