ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3LWP:D57:D54

Extra

PDB:
ATOM 1 O3' A A 56 16.827 43.339 8.375 1.00 66.73 O
ATOM 2 P A A 57 17.575 44.417 7.479 1.00 70.96 P
ATOM 3 OP1 A A 57 17.197 44.121 6.077 1.00 61.18 O
ATOM 4 OP2 A A 57 18.992 44.517 7.903 1.00 77.17 O
ATOM 5 O5' A A 57 16.886 45.818 7.841 1.00 86.22 O
ATOM 6 C5' A A 57 15.542 46.101 7.478 1.00 95.28 C
ATOM 7 C4' A A 57 15.014 47.306 8.217 1.00106.42 C
ATOM 8 O4' A A 57 13.681 46.979 8.691 1.00109.09 O
ATOM 9 C3' A A 57 15.815 47.720 9.453 1.00108.02 C
ATOM 10 O3' A A 57 15.707 49.133 9.648 1.00103.19 O
ATOM 11 C2' A A 57 15.105 46.978 10.584 1.00108.28 C
ATOM 12 O2' A A 57 15.257 47.562 11.865 1.00101.54 O
ATOM 13 C1' A A 57 13.649 46.986 10.107 1.00107.57 C
ATOM 14 N9 A A 57 12.856 45.821 10.526 1.00 99.01 N
ATOM 15 C8 A A 57 11.569 45.552 10.143 1.00 96.79 C
ATOM 16 N7 A A 57 11.073 44.449 10.649 1.00 89.70 N
ATOM 17 C5 A A 57 12.113 43.948 11.417 1.00 82.13 C
ATOM 18 C6 A A 57 12.217 42.792 12.213 1.00 75.73 C
ATOM 19 N6 A A 57 11.217 41.905 12.362 1.00 68.50 N
ATOM 20 N1 A A 57 13.392 42.583 12.844 1.00 78.62 N
ATOM 21 C2 A A 57 14.388 43.461 12.687 1.00 77.46 C
ATOM 22 N3 A A 57 14.404 44.577 11.967 1.00 78.85 N
ATOM 23 C4 A A 57 13.225 44.771 11.350 1.00 85.60 C
TER

ATOM 1 O3' C B 53 5.947 38.329 16.965 1.00 54.90 O
ATOM 2 P A B 54 5.970 39.904 17.067 1.00 56.74 P
ATOM 3 OP1 A B 54 5.952 40.361 18.477 1.00 52.73 O
ATOM 4 OP2 A B 54 4.986 40.329 16.047 1.00 47.22 O
ATOM 5 O5' A B 54 7.449 40.251 16.572 1.00 65.48 O
ATOM 6 C5' A B 54 7.768 39.844 15.252 1.00 69.98 C
ATOM 7 C4' A B 54 9.252 39.715 15.022 1.00 71.39 C
ATOM 8 O4' A B 54 9.899 39.046 16.122 1.00 62.39 O
ATOM 9 C3' A B 54 9.629 38.921 13.790 1.00 73.52 C
ATOM 10 O3' A B 54 9.720 39.809 12.693 1.00 77.40 O
ATOM 11 C2' A B 54 10.953 38.240 14.132 1.00 67.58 C
ATOM 12 O2' A B 54 12.046 39.004 13.645 1.00 73.56 O
ATOM 13 C1' A B 54 10.995 38.299 15.657 1.00 57.13 C
ATOM 14 N9 A B 54 10.920 37.028 16.377 1.00 55.40 N
ATOM 15 C8 A B 54 11.618 36.790 17.527 1.00 51.43 C
ATOM 16 N7 A B 54 11.368 35.636 18.069 1.00 37.32 N
ATOM 17 C5 A B 54 10.422 35.096 17.222 1.00 35.88 C
ATOM 18 C6 A B 54 9.765 33.871 17.268 1.00 44.50 C
ATOM 19 N6 A B 54 9.994 32.977 18.242 1.00 44.45 N
ATOM 20 N1 A B 54 8.876 33.630 16.282 1.00 52.43 N
ATOM 21 C2 A B 54 8.663 34.546 15.321 1.00 38.62 C
ATOM 22 N3 A B 54 9.246 35.724 15.176 1.00 45.38 N
ATOM 23 C4 A B 54 10.116 35.937 16.172 1.00 47.62 C
ATOM 24 P C B 55 9.035 39.400 11.328 1.00 90.14 P
ATOM 25 OP1 C B 55 8.465 40.619 10.718 1.00 81.41 O
ATOM 26 OP2 C B 55 8.237 38.160 11.524 1.00 86.51 O
ATOM 27 O5' C B 55 10.310 39.026 10.430 1.00 88.75 O
TER

Atoms:
OP1: (17.197,44.121,6.077)
OP2: (18.992,44.517,7.903)
C3': (15.815,47.720,9.453)
C1': (13.649,46.986,10.107)
C5': (15.542,46.101,7.478)
O4': (13.681,46.979,8.691)
C8: (11.569,45.552,10.143)
O2': (15.257,47.562,11.865)
C6: (12.217,42.792,12.213)
C5: (12.113,43.948,11.417)
C4: (13.225,44.771,11.350)
P: (17.575,44.417,7.479)
C4': (15.014,47.306,8.217)
C2': (15.105,46.978,10.584)
C2: (14.388,43.461,12.687)
N1: (13.392,42.583,12.844)
N3: (14.404,44.577,11.967)
N6: (11.217,41.905,12.362)
N7: (11.073,44.449,10.649)
N9: (12.856,45.821,10.526)
O5': (16.886,45.818,7.841)
O3': (15.707,49.133,9.648)
OP1: (5.952,40.361,18.477)
OP2: (4.986,40.329,16.047)
C3': (9.629,38.921,13.790)
C1': (10.995,38.299,15.657)
C5': (7.768,39.844,15.252)
O4': (9.899,39.046,16.122)
C8: (11.618,36.790,17.527)
O2': (12.046,39.004,13.645)
C6: (9.765,33.871,17.268)
C5: (10.422,35.096,17.222)
C4: (10.116,35.937,16.172)
P: (5.970,39.904,17.067)
C4': (9.252,39.715,15.022)
C2': (10.953,38.240,14.132)
C2: (8.663,34.546,15.321)
N1: (8.876,33.630,16.282)
N3: (9.246,35.724,15.176)
N6: (9.994,32.977,18.242)
N7: (11.368,35.636,18.069)
N9: (10.920,37.028,16.377)
O5': (7.449,40.251,16.572)
O3': (9.720,39.809,12.693)
Image (generated by PyMOL):
PyMOL image
show in jmol