Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2415:A2385
Extra
PDB:
ATOM 1 O3' G A2414 -108.897 -36.752 44.641 1.00 0.01 O
ATOM 2 P C A2415 -109.389 -37.305 43.240 1.00 6.72 P
ATOM 3 OP1 C A2415 -109.651 -36.137 42.360 1.00 6.72 O
ATOM 4 OP2 C A2415 -110.491 -38.262 43.515 1.00 6.72 O
ATOM 5 O5' C A2415 -108.122 -38.090 42.710 1.00 6.72 O
ATOM 6 C5' C A2415 -108.275 -39.013 41.652 1.00 6.72 C
ATOM 7 C4' C A2415 -107.020 -39.189 40.864 1.00 6.72 C
ATOM 8 O4' C A2415 -106.076 -39.946 41.642 1.00 6.72 O
ATOM 9 C3' C A2415 -107.214 -39.933 39.556 1.00 6.72 C
ATOM 10 O3' C A2415 -107.146 -39.052 38.457 1.00 6.72 O
ATOM 11 C2' C A2415 -106.136 -41.017 39.516 1.00 6.72 C
ATOM 12 O2' C A2415 -105.112 -40.693 38.586 1.00 6.72 O
ATOM 13 C1' C A2415 -105.546 -41.013 40.919 1.00 6.72 C
ATOM 14 N1 C A2415 -105.830 -42.255 41.643 1.00 6.27 N
ATOM 15 C2 C A2415 -104.770 -42.723 42.375 1.00 6.27 C
ATOM 16 O2 C A2415 -103.749 -42.019 42.299 1.00 6.27 O
ATOM 17 N3 C A2415 -104.896 -43.864 43.089 1.00 6.27 N
ATOM 18 C4 C A2415 -106.054 -44.489 43.045 1.00 6.27 C
ATOM 19 N4 C A2415 -106.180 -45.603 43.733 1.00 6.27 N
ATOM 20 C5 C A2415 -107.154 -44.020 42.304 1.00 6.27 C
ATOM 21 C6 C A2415 -107.017 -42.899 41.611 1.00 6.27 C
ATOM 22 P U A2416 -108.459 -38.609 37.672 1.00 15.95 P
ATOM 23 OP1 U A2416 -108.623 -37.142 37.904 1.00 15.95 O
ATOM 24 OP2 U A2416 -109.550 -39.531 38.085 1.00 15.95 O
ATOM 25 O5' U A2416 -108.053 -38.885 36.145 1.00 15.95 O
TER
ATOM 1 O3' G B2384 -109.515 -47.727 41.954 1.00 0.01 O
ATOM 2 P A B2385 -109.594 -48.456 43.395 1.00 0.01 P
ATOM 3 OP1 A B2385 -110.964 -48.314 43.910 1.00 0.01 O
ATOM 4 OP2 A B2385 -108.471 -47.956 44.222 1.00 0.01 O
ATOM 5 O5' A B2385 -109.341 -49.941 43.001 1.00 0.01 O
ATOM 6 C5' A B2385 -109.886 -50.978 43.752 1.00 0.01 C
ATOM 7 C4' A B2385 -108.992 -52.152 43.667 1.00 0.01 C
ATOM 8 O4' A B2385 -108.229 -52.051 42.451 1.00 0.01 O
ATOM 9 C3' A B2385 -107.947 -52.244 44.744 1.00 0.01 C
ATOM 10 O3' A B2385 -108.459 -52.819 45.926 1.00 0.01 O
ATOM 11 C2' A B2385 -106.871 -53.066 44.077 1.00 0.01 C
ATOM 12 O2' A B2385 -107.244 -54.429 44.063 1.00 0.01 O
ATOM 13 C1' A B2385 -106.942 -52.548 42.653 1.00 0.01 C
ATOM 14 N9 A B2385 -106.004 -51.459 42.373 1.00 0.02 N
ATOM 15 C8 A B2385 -106.408 -50.320 41.719 1.00 0.02 C
ATOM 16 N7 A B2385 -105.452 -49.456 41.500 1.00 0.02 N
ATOM 17 C5 A B2385 -104.343 -50.088 42.025 1.00 0.02 C
ATOM 18 C6 A B2385 -103.023 -49.682 42.097 1.00 0.02 C
ATOM 19 N6 A B2385 -102.604 -48.504 41.611 1.00 0.02 N
ATOM 20 N1 A B2385 -102.158 -50.529 42.682 1.00 0.02 N
ATOM 21 C2 A B2385 -102.586 -51.688 43.154 1.00 0.02 C
ATOM 22 N3 A B2385 -103.800 -52.178 43.132 1.00 0.02 N
ATOM 23 C4 A B2385 -104.648 -51.326 42.552 1.00 0.02 C
ATOM 24 P U B2386 -108.561 -51.949 47.250 1.00 0.01 P
ATOM 25 OP1 U B2386 -109.502 -52.636 48.161 1.00 0.01 O
ATOM 26 OP2 U B2386 -108.853 -50.566 46.834 1.00 0.01 O
ATOM 27 O5' U B2386 -107.083 -52.055 47.811 1.00 0.01 O
TER
ATOM 2 P C A2415 -109.389 -37.305 43.240 1.00 6.72 P
ATOM 3 OP1 C A2415 -109.651 -36.137 42.360 1.00 6.72 O
ATOM 4 OP2 C A2415 -110.491 -38.262 43.515 1.00 6.72 O
ATOM 5 O5' C A2415 -108.122 -38.090 42.710 1.00 6.72 O
ATOM 6 C5' C A2415 -108.275 -39.013 41.652 1.00 6.72 C
ATOM 7 C4' C A2415 -107.020 -39.189 40.864 1.00 6.72 C
ATOM 8 O4' C A2415 -106.076 -39.946 41.642 1.00 6.72 O
ATOM 9 C3' C A2415 -107.214 -39.933 39.556 1.00 6.72 C
ATOM 10 O3' C A2415 -107.146 -39.052 38.457 1.00 6.72 O
ATOM 11 C2' C A2415 -106.136 -41.017 39.516 1.00 6.72 C
ATOM 12 O2' C A2415 -105.112 -40.693 38.586 1.00 6.72 O
ATOM 13 C1' C A2415 -105.546 -41.013 40.919 1.00 6.72 C
ATOM 14 N1 C A2415 -105.830 -42.255 41.643 1.00 6.27 N
ATOM 15 C2 C A2415 -104.770 -42.723 42.375 1.00 6.27 C
ATOM 16 O2 C A2415 -103.749 -42.019 42.299 1.00 6.27 O
ATOM 17 N3 C A2415 -104.896 -43.864 43.089 1.00 6.27 N
ATOM 18 C4 C A2415 -106.054 -44.489 43.045 1.00 6.27 C
ATOM 19 N4 C A2415 -106.180 -45.603 43.733 1.00 6.27 N
ATOM 20 C5 C A2415 -107.154 -44.020 42.304 1.00 6.27 C
ATOM 21 C6 C A2415 -107.017 -42.899 41.611 1.00 6.27 C
ATOM 22 P U A2416 -108.459 -38.609 37.672 1.00 15.95 P
ATOM 23 OP1 U A2416 -108.623 -37.142 37.904 1.00 15.95 O
ATOM 24 OP2 U A2416 -109.550 -39.531 38.085 1.00 15.95 O
ATOM 25 O5' U A2416 -108.053 -38.885 36.145 1.00 15.95 O
TER
ATOM 1 O3' G B2384 -109.515 -47.727 41.954 1.00 0.01 O
ATOM 2 P A B2385 -109.594 -48.456 43.395 1.00 0.01 P
ATOM 3 OP1 A B2385 -110.964 -48.314 43.910 1.00 0.01 O
ATOM 4 OP2 A B2385 -108.471 -47.956 44.222 1.00 0.01 O
ATOM 5 O5' A B2385 -109.341 -49.941 43.001 1.00 0.01 O
ATOM 6 C5' A B2385 -109.886 -50.978 43.752 1.00 0.01 C
ATOM 7 C4' A B2385 -108.992 -52.152 43.667 1.00 0.01 C
ATOM 8 O4' A B2385 -108.229 -52.051 42.451 1.00 0.01 O
ATOM 9 C3' A B2385 -107.947 -52.244 44.744 1.00 0.01 C
ATOM 10 O3' A B2385 -108.459 -52.819 45.926 1.00 0.01 O
ATOM 11 C2' A B2385 -106.871 -53.066 44.077 1.00 0.01 C
ATOM 12 O2' A B2385 -107.244 -54.429 44.063 1.00 0.01 O
ATOM 13 C1' A B2385 -106.942 -52.548 42.653 1.00 0.01 C
ATOM 14 N9 A B2385 -106.004 -51.459 42.373 1.00 0.02 N
ATOM 15 C8 A B2385 -106.408 -50.320 41.719 1.00 0.02 C
ATOM 16 N7 A B2385 -105.452 -49.456 41.500 1.00 0.02 N
ATOM 17 C5 A B2385 -104.343 -50.088 42.025 1.00 0.02 C
ATOM 18 C6 A B2385 -103.023 -49.682 42.097 1.00 0.02 C
ATOM 19 N6 A B2385 -102.604 -48.504 41.611 1.00 0.02 N
ATOM 20 N1 A B2385 -102.158 -50.529 42.682 1.00 0.02 N
ATOM 21 C2 A B2385 -102.586 -51.688 43.154 1.00 0.02 C
ATOM 22 N3 A B2385 -103.800 -52.178 43.132 1.00 0.02 N
ATOM 23 C4 A B2385 -104.648 -51.326 42.552 1.00 0.02 C
ATOM 24 P U B2386 -108.561 -51.949 47.250 1.00 0.01 P
ATOM 25 OP1 U B2386 -109.502 -52.636 48.161 1.00 0.01 O
ATOM 26 OP2 U B2386 -108.853 -50.566 46.834 1.00 0.01 O
ATOM 27 O5' U B2386 -107.083 -52.055 47.811 1.00 0.01 O
TER
Atoms:
C2: (-104.770,-42.723,42.375)
OP1: (-109.651,-36.137,42.360)
OP2: (-110.491,-38.262,43.515)
C4: (-106.054,-44.489,43.045)
O5': (-108.122,-38.090,42.710)
C3': (-107.214,-39.933,39.556)
C1': (-105.546,-41.013,40.919)
O4': (-106.076,-39.946,41.642)
C5': (-108.275,-39.013,41.652)
P: (-109.389,-37.305,43.240)
O2: (-103.749,-42.019,42.299)
C4': (-107.020,-39.189,40.864)
C2': (-106.136,-41.017,39.516)
O2': (-105.112,-40.693,38.586)
N1: (-105.830,-42.255,41.643)
N3: (-104.896,-43.864,43.089)
N4: (-106.180,-45.603,43.733)
C6: (-107.017,-42.899,41.611)
C5: (-107.154,-44.020,42.304)
O3': (-107.146,-39.052,38.457)
OP1: (-109.651,-36.137,42.360)
OP2: (-110.491,-38.262,43.515)
C4: (-106.054,-44.489,43.045)
O5': (-108.122,-38.090,42.710)
C3': (-107.214,-39.933,39.556)
C1': (-105.546,-41.013,40.919)
O4': (-106.076,-39.946,41.642)
C5': (-108.275,-39.013,41.652)
P: (-109.389,-37.305,43.240)
O2: (-103.749,-42.019,42.299)
C4': (-107.020,-39.189,40.864)
C2': (-106.136,-41.017,39.516)
O2': (-105.112,-40.693,38.586)
N1: (-105.830,-42.255,41.643)
N3: (-104.896,-43.864,43.089)
N4: (-106.180,-45.603,43.733)
C6: (-107.017,-42.899,41.611)
C5: (-107.154,-44.020,42.304)
O3': (-107.146,-39.052,38.457)
OP1: (-110.964,-48.314,43.910)
OP2: (-108.471,-47.956,44.222)
C3': (-107.947,-52.244,44.744)
C1': (-106.942,-52.548,42.653)
C5': (-109.886,-50.978,43.752)
O4': (-108.229,-52.051,42.451)
C8: (-106.408,-50.320,41.719)
O2': (-107.244,-54.429,44.063)
C6: (-103.023,-49.682,42.097)
C5: (-104.343,-50.088,42.025)
C4: (-104.648,-51.326,42.552)
P: (-109.594,-48.456,43.395)
C4': (-108.992,-52.152,43.667)
C2': (-106.871,-53.066,44.077)
C2: (-102.586,-51.688,43.154)
N1: (-102.158,-50.529,42.682)
N3: (-103.800,-52.178,43.132)
N6: (-102.604,-48.504,41.611)
N7: (-105.452,-49.456,41.500)
N9: (-106.004,-51.459,42.373)
O5': (-109.341,-49.941,43.001)
O3': (-108.459,-52.819,45.926)
OP2: (-108.471,-47.956,44.222)
C3': (-107.947,-52.244,44.744)
C1': (-106.942,-52.548,42.653)
C5': (-109.886,-50.978,43.752)
O4': (-108.229,-52.051,42.451)
C8: (-106.408,-50.320,41.719)
O2': (-107.244,-54.429,44.063)
C6: (-103.023,-49.682,42.097)
C5: (-104.343,-50.088,42.025)
C4: (-104.648,-51.326,42.552)
P: (-109.594,-48.456,43.395)
C4': (-108.992,-52.152,43.667)
C2': (-106.871,-53.066,44.077)
C2: (-102.586,-51.688,43.154)
N1: (-102.158,-50.529,42.682)
N3: (-103.800,-52.178,43.132)
N6: (-102.604,-48.504,41.611)
N7: (-105.452,-49.456,41.500)
N9: (-106.004,-51.459,42.373)
O5': (-109.341,-49.941,43.001)
O3': (-108.459,-52.819,45.926)
Image (generated by PyMOL):