Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2189:A2218
Extra
PDB:
ATOM 1 O3' U A2188 -63.577 8.097 63.166 1.00 24.19 O
ATOM 2 P C A2189 -62.330 7.082 63.184 1.00 11.46 P
ATOM 3 OP1 C A2189 -61.102 7.906 63.270 1.00 11.46 O
ATOM 4 OP2 C A2189 -62.497 6.159 62.020 1.00 11.46 O
ATOM 5 O5' C A2189 -62.534 6.291 64.549 1.00 11.46 O
ATOM 6 C5' C A2189 -62.042 6.827 65.765 1.00 11.46 C
ATOM 7 C4' C A2189 -62.336 5.913 66.922 1.00 11.46 C
ATOM 8 O4' C A2189 -63.658 5.363 66.780 1.00 11.46 O
ATOM 9 C3' C A2189 -61.436 4.713 67.051 1.00 11.46 C
ATOM 10 O3' C A2189 -60.237 5.040 67.723 1.00 11.46 O
ATOM 11 C2' C A2189 -62.302 3.719 67.807 1.00 11.46 C
ATOM 12 O2' C A2189 -62.231 3.956 69.194 1.00 11.46 O
ATOM 13 C1' C A2189 -63.709 4.082 67.332 1.00 11.46 C
ATOM 14 N1 C A2189 -64.241 3.141 66.309 1.00 11.26 N
ATOM 15 C2 C A2189 -64.959 2.006 66.736 1.00 11.26 C
ATOM 16 O2 C A2189 -65.094 1.825 67.945 1.00 11.26 O
ATOM 17 N3 C A2189 -65.465 1.126 65.850 1.00 11.26 N
ATOM 18 C4 C A2189 -65.289 1.345 64.551 1.00 11.26 C
ATOM 19 N4 C A2189 -65.778 0.443 63.687 1.00 11.26 N
ATOM 20 C5 C A2189 -64.586 2.506 64.070 1.00 11.26 C
ATOM 21 C6 C A2189 -64.085 3.381 64.965 1.00 11.26 C
ATOM 22 P U A2190 -58.816 4.462 67.225 1.00 2.97 P
ATOM 23 OP1 U A2190 -57.756 5.339 67.801 1.00 2.97 O
ATOM 24 OP2 U A2190 -58.890 4.304 65.731 1.00 2.97 O
ATOM 25 O5' U A2190 -58.779 3.046 67.934 1.00 2.97 O
TER
ATOM 1 O3' G B2217 -64.888 -2.530 59.562 1.00 0.60 O
ATOM 2 P A B2218 -66.033 -1.623 60.240 1.00 7.10 P
ATOM 3 OP1 A B2218 -67.247 -1.728 59.397 1.00 7.10 O
ATOM 4 OP2 A B2218 -65.453 -0.302 60.479 1.00 7.10 O
ATOM 5 O5' A B2218 -66.285 -2.322 61.626 1.00 7.10 O
ATOM 6 C5' A B2218 -67.449 -3.086 61.834 1.00 7.10 C
ATOM 7 C4' A B2218 -67.127 -4.530 61.742 1.00 7.10 C
ATOM 8 O4' A B2218 -65.876 -4.746 62.430 1.00 7.10 O
ATOM 9 C3' A B2218 -68.141 -5.472 62.372 1.00 7.10 C
ATOM 10 O3' A B2218 -68.162 -6.683 61.636 1.00 7.10 O
ATOM 11 C2' A B2218 -67.539 -5.736 63.740 1.00 7.10 C
ATOM 12 O2' A B2218 -67.907 -6.965 64.326 1.00 7.10 O
ATOM 13 C1' A B2218 -66.050 -5.699 63.443 1.00 7.10 C
ATOM 14 N9 A B2218 -65.271 -5.287 64.586 1.00 6.93 N
ATOM 15 C8 A B2218 -64.789 -4.045 64.893 1.00 6.93 C
ATOM 16 N7 A B2218 -64.175 -4.012 66.052 1.00 6.93 N
ATOM 17 C5 A B2218 -64.281 -5.301 66.489 1.00 6.93 C
ATOM 18 C6 A B2218 -63.821 -5.864 67.634 1.00 6.93 C
ATOM 19 N6 A B2218 -63.167 -5.153 68.528 1.00 6.93 N
ATOM 20 N1 A B2218 -64.090 -7.169 67.802 1.00 6.93 N
ATOM 21 C2 A B2218 -64.771 -7.836 66.847 1.00 6.93 C
ATOM 22 N3 A B2218 -65.266 -7.396 65.703 1.00 6.93 N
ATOM 23 C4 A B2218 -64.966 -6.105 65.614 1.00 6.93 C
ATOM 24 P C B2219 -69.427 -7.090 60.747 1.00 0.01 P
ATOM 25 OP1 C B2219 -70.590 -7.064 61.647 1.00 0.01 O
ATOM 26 OP2 C B2219 -69.084 -8.376 60.055 1.00 0.01 O
ATOM 27 O5' C B2219 -69.513 -5.908 59.683 1.00 0.01 O
TER
ATOM 2 P C A2189 -62.330 7.082 63.184 1.00 11.46 P
ATOM 3 OP1 C A2189 -61.102 7.906 63.270 1.00 11.46 O
ATOM 4 OP2 C A2189 -62.497 6.159 62.020 1.00 11.46 O
ATOM 5 O5' C A2189 -62.534 6.291 64.549 1.00 11.46 O
ATOM 6 C5' C A2189 -62.042 6.827 65.765 1.00 11.46 C
ATOM 7 C4' C A2189 -62.336 5.913 66.922 1.00 11.46 C
ATOM 8 O4' C A2189 -63.658 5.363 66.780 1.00 11.46 O
ATOM 9 C3' C A2189 -61.436 4.713 67.051 1.00 11.46 C
ATOM 10 O3' C A2189 -60.237 5.040 67.723 1.00 11.46 O
ATOM 11 C2' C A2189 -62.302 3.719 67.807 1.00 11.46 C
ATOM 12 O2' C A2189 -62.231 3.956 69.194 1.00 11.46 O
ATOM 13 C1' C A2189 -63.709 4.082 67.332 1.00 11.46 C
ATOM 14 N1 C A2189 -64.241 3.141 66.309 1.00 11.26 N
ATOM 15 C2 C A2189 -64.959 2.006 66.736 1.00 11.26 C
ATOM 16 O2 C A2189 -65.094 1.825 67.945 1.00 11.26 O
ATOM 17 N3 C A2189 -65.465 1.126 65.850 1.00 11.26 N
ATOM 18 C4 C A2189 -65.289 1.345 64.551 1.00 11.26 C
ATOM 19 N4 C A2189 -65.778 0.443 63.687 1.00 11.26 N
ATOM 20 C5 C A2189 -64.586 2.506 64.070 1.00 11.26 C
ATOM 21 C6 C A2189 -64.085 3.381 64.965 1.00 11.26 C
ATOM 22 P U A2190 -58.816 4.462 67.225 1.00 2.97 P
ATOM 23 OP1 U A2190 -57.756 5.339 67.801 1.00 2.97 O
ATOM 24 OP2 U A2190 -58.890 4.304 65.731 1.00 2.97 O
ATOM 25 O5' U A2190 -58.779 3.046 67.934 1.00 2.97 O
TER
ATOM 1 O3' G B2217 -64.888 -2.530 59.562 1.00 0.60 O
ATOM 2 P A B2218 -66.033 -1.623 60.240 1.00 7.10 P
ATOM 3 OP1 A B2218 -67.247 -1.728 59.397 1.00 7.10 O
ATOM 4 OP2 A B2218 -65.453 -0.302 60.479 1.00 7.10 O
ATOM 5 O5' A B2218 -66.285 -2.322 61.626 1.00 7.10 O
ATOM 6 C5' A B2218 -67.449 -3.086 61.834 1.00 7.10 C
ATOM 7 C4' A B2218 -67.127 -4.530 61.742 1.00 7.10 C
ATOM 8 O4' A B2218 -65.876 -4.746 62.430 1.00 7.10 O
ATOM 9 C3' A B2218 -68.141 -5.472 62.372 1.00 7.10 C
ATOM 10 O3' A B2218 -68.162 -6.683 61.636 1.00 7.10 O
ATOM 11 C2' A B2218 -67.539 -5.736 63.740 1.00 7.10 C
ATOM 12 O2' A B2218 -67.907 -6.965 64.326 1.00 7.10 O
ATOM 13 C1' A B2218 -66.050 -5.699 63.443 1.00 7.10 C
ATOM 14 N9 A B2218 -65.271 -5.287 64.586 1.00 6.93 N
ATOM 15 C8 A B2218 -64.789 -4.045 64.893 1.00 6.93 C
ATOM 16 N7 A B2218 -64.175 -4.012 66.052 1.00 6.93 N
ATOM 17 C5 A B2218 -64.281 -5.301 66.489 1.00 6.93 C
ATOM 18 C6 A B2218 -63.821 -5.864 67.634 1.00 6.93 C
ATOM 19 N6 A B2218 -63.167 -5.153 68.528 1.00 6.93 N
ATOM 20 N1 A B2218 -64.090 -7.169 67.802 1.00 6.93 N
ATOM 21 C2 A B2218 -64.771 -7.836 66.847 1.00 6.93 C
ATOM 22 N3 A B2218 -65.266 -7.396 65.703 1.00 6.93 N
ATOM 23 C4 A B2218 -64.966 -6.105 65.614 1.00 6.93 C
ATOM 24 P C B2219 -69.427 -7.090 60.747 1.00 0.01 P
ATOM 25 OP1 C B2219 -70.590 -7.064 61.647 1.00 0.01 O
ATOM 26 OP2 C B2219 -69.084 -8.376 60.055 1.00 0.01 O
ATOM 27 O5' C B2219 -69.513 -5.908 59.683 1.00 0.01 O
TER
Atoms:
C2: (-64.959,2.006,66.736)
OP1: (-61.102,7.906,63.270)
OP2: (-62.497,6.159,62.020)
C4: (-65.289,1.345,64.551)
O5': (-62.534,6.291,64.549)
C3': (-61.436,4.713,67.051)
C1': (-63.709,4.082,67.332)
O4': (-63.658,5.363,66.780)
C5': (-62.042,6.827,65.765)
P: (-62.330,7.082,63.184)
O2: (-65.094,1.825,67.945)
C4': (-62.336,5.913,66.922)
C2': (-62.302,3.719,67.807)
O2': (-62.231,3.956,69.194)
N1: (-64.241,3.141,66.309)
N3: (-65.465,1.126,65.850)
N4: (-65.778,0.443,63.687)
C6: (-64.085,3.381,64.965)
C5: (-64.586,2.506,64.070)
O3': (-60.237,5.040,67.723)
OP1: (-61.102,7.906,63.270)
OP2: (-62.497,6.159,62.020)
C4: (-65.289,1.345,64.551)
O5': (-62.534,6.291,64.549)
C3': (-61.436,4.713,67.051)
C1': (-63.709,4.082,67.332)
O4': (-63.658,5.363,66.780)
C5': (-62.042,6.827,65.765)
P: (-62.330,7.082,63.184)
O2: (-65.094,1.825,67.945)
C4': (-62.336,5.913,66.922)
C2': (-62.302,3.719,67.807)
O2': (-62.231,3.956,69.194)
N1: (-64.241,3.141,66.309)
N3: (-65.465,1.126,65.850)
N4: (-65.778,0.443,63.687)
C6: (-64.085,3.381,64.965)
C5: (-64.586,2.506,64.070)
O3': (-60.237,5.040,67.723)
OP1: (-67.247,-1.728,59.397)
OP2: (-65.453,-0.302,60.479)
C3': (-68.141,-5.472,62.372)
C1': (-66.050,-5.699,63.443)
C5': (-67.449,-3.086,61.834)
O4': (-65.876,-4.746,62.430)
C8: (-64.789,-4.045,64.893)
O2': (-67.907,-6.965,64.326)
C6: (-63.821,-5.864,67.634)
C5: (-64.281,-5.301,66.489)
C4: (-64.966,-6.105,65.614)
P: (-66.033,-1.623,60.240)
C4': (-67.127,-4.530,61.742)
C2': (-67.539,-5.736,63.740)
C2: (-64.771,-7.836,66.847)
N1: (-64.090,-7.169,67.802)
N3: (-65.266,-7.396,65.703)
N6: (-63.167,-5.153,68.528)
N7: (-64.175,-4.012,66.052)
N9: (-65.271,-5.287,64.586)
O5': (-66.285,-2.322,61.626)
O3': (-68.162,-6.683,61.636)
OP2: (-65.453,-0.302,60.479)
C3': (-68.141,-5.472,62.372)
C1': (-66.050,-5.699,63.443)
C5': (-67.449,-3.086,61.834)
O4': (-65.876,-4.746,62.430)
C8: (-64.789,-4.045,64.893)
O2': (-67.907,-6.965,64.326)
C6: (-63.821,-5.864,67.634)
C5: (-64.281,-5.301,66.489)
C4: (-64.966,-6.105,65.614)
P: (-66.033,-1.623,60.240)
C4': (-67.127,-4.530,61.742)
C2': (-67.539,-5.736,63.740)
C2: (-64.771,-7.836,66.847)
N1: (-64.090,-7.169,67.802)
N3: (-65.266,-7.396,65.703)
N6: (-63.167,-5.153,68.528)
N7: (-64.175,-4.012,66.052)
N9: (-65.271,-5.287,64.586)
O5': (-66.285,-2.322,61.626)
O3': (-68.162,-6.683,61.636)
Image (generated by PyMOL):