Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A967:A965
Extra
PDB:
ATOM 1 O3' A A 966 68.077 67.784 106.248 1.00 44.10 O
ATOM 2 P C A 967 68.559 66.678 107.323 1.00 45.07 P
ATOM 3 OP1 C A 967 69.064 67.355 108.551 1.00 42.96 O
ATOM 4 OP2 C A 967 69.451 65.756 106.582 1.00 44.39 O
ATOM 5 O5' C A 967 67.231 65.871 107.690 1.00 43.57 O
ATOM 6 C5' C A 967 66.589 66.031 108.966 1.00 40.83 C
ATOM 7 C4' C A 967 66.637 64.737 109.743 1.00 41.29 C
ATOM 8 O4' C A 967 66.693 65.042 111.154 1.00 41.06 O
ATOM 9 C3' C A 967 65.469 63.769 109.563 1.00 39.83 C
ATOM 10 O3' C A 967 65.705 62.852 108.495 1.00 39.85 O
ATOM 11 C2' C A 967 65.449 63.031 110.895 1.00 39.87 C
ATOM 12 O2' C A 967 66.436 62.022 110.963 1.00 40.47 O
ATOM 13 C1' C A 967 65.870 64.138 111.861 1.00 40.78 C
ATOM 14 N1 C A 967 64.755 64.908 112.414 1.00 40.33 N
ATOM 15 C2 C A 967 64.007 64.360 113.458 1.00 39.12 C
ATOM 16 O2 C A 967 64.263 63.206 113.845 1.00 38.22 O
ATOM 17 N3 C A 967 63.027 65.106 114.012 1.00 38.77 N
ATOM 18 C4 C A 967 62.784 66.340 113.552 1.00 38.15 C
ATOM 19 N4 C A 967 61.840 67.075 114.152 1.00 36.23 N
ATOM 20 C5 C A 967 63.501 66.890 112.464 1.00 37.58 C
ATOM 21 C6 C A 967 64.467 66.156 111.931 1.00 39.20 C
ATOM 22 P U A 968 64.470 62.092 107.781 1.00 42.20 P
ATOM 23 OP1 U A 968 65.077 61.165 106.806 1.00 41.74 O
ATOM 24 OP2 U A 968 63.464 63.089 107.309 1.00 42.60 O
ATOM 25 O5' U A 968 63.790 61.191 108.917 1.00 42.17 O
TER
ATOM 1 O3' A B 964 62.799 71.843 114.476 1.00 41.28 O
ATOM 2 P A B 965 61.516 71.415 113.595 1.00 41.92 P
ATOM 3 OP1 A B 965 60.412 72.379 113.878 1.00 41.87 O
ATOM 4 OP2 A B 965 61.292 69.973 113.856 1.00 41.08 O
ATOM 5 O5' A B 965 62.004 71.648 112.082 1.00 41.68 O
ATOM 6 C5' A B 965 62.371 72.984 111.614 1.00 41.38 C
ATOM 7 C4' A B 965 62.659 73.009 110.119 1.00 40.75 C
ATOM 8 O4' A B 965 62.832 74.384 109.699 1.00 41.77 O
ATOM 9 C3' A B 965 63.957 72.368 109.690 1.00 41.92 C
ATOM 10 O3' A B 965 63.775 70.963 109.610 1.00 42.10 O
ATOM 11 C2' A B 965 64.248 73.034 108.342 1.00 41.91 C
ATOM 12 O2' A B 965 63.526 72.502 107.248 1.00 42.63 O
ATOM 13 C1' A B 965 63.731 74.449 108.594 1.00 42.59 C
ATOM 14 N9 A B 965 64.728 75.512 108.826 1.00 43.01 N
ATOM 15 C8 A B 965 64.966 76.215 109.988 1.00 43.66 C
ATOM 16 N7 A B 965 65.889 77.139 109.870 1.00 43.39 N
ATOM 17 C5 A B 965 66.298 77.037 108.548 1.00 42.07 C
ATOM 18 C6 A B 965 67.254 77.749 107.791 1.00 41.46 C
ATOM 19 N6 A B 965 67.996 78.751 108.267 1.00 41.08 N
ATOM 20 N1 A B 965 67.420 77.394 106.500 1.00 41.14 N
ATOM 21 C2 A B 965 66.675 76.397 106.008 1.00 42.24 C
ATOM 22 N3 A B 965 65.749 75.659 106.614 1.00 42.24 N
ATOM 23 C4 A B 965 65.603 76.033 107.896 1.00 42.36 C
ATOM 24 P A B 966 65.015 69.974 109.893 1.00 42.07 P
ATOM 25 OP1 A B 966 64.370 68.652 109.956 1.00 40.86 O
ATOM 26 OP2 A B 966 65.888 70.429 111.024 1.00 39.04 O
ATOM 27 O5' A B 966 65.889 70.040 108.563 1.00 39.48 O
TER
ATOM 2 P C A 967 68.559 66.678 107.323 1.00 45.07 P
ATOM 3 OP1 C A 967 69.064 67.355 108.551 1.00 42.96 O
ATOM 4 OP2 C A 967 69.451 65.756 106.582 1.00 44.39 O
ATOM 5 O5' C A 967 67.231 65.871 107.690 1.00 43.57 O
ATOM 6 C5' C A 967 66.589 66.031 108.966 1.00 40.83 C
ATOM 7 C4' C A 967 66.637 64.737 109.743 1.00 41.29 C
ATOM 8 O4' C A 967 66.693 65.042 111.154 1.00 41.06 O
ATOM 9 C3' C A 967 65.469 63.769 109.563 1.00 39.83 C
ATOM 10 O3' C A 967 65.705 62.852 108.495 1.00 39.85 O
ATOM 11 C2' C A 967 65.449 63.031 110.895 1.00 39.87 C
ATOM 12 O2' C A 967 66.436 62.022 110.963 1.00 40.47 O
ATOM 13 C1' C A 967 65.870 64.138 111.861 1.00 40.78 C
ATOM 14 N1 C A 967 64.755 64.908 112.414 1.00 40.33 N
ATOM 15 C2 C A 967 64.007 64.360 113.458 1.00 39.12 C
ATOM 16 O2 C A 967 64.263 63.206 113.845 1.00 38.22 O
ATOM 17 N3 C A 967 63.027 65.106 114.012 1.00 38.77 N
ATOM 18 C4 C A 967 62.784 66.340 113.552 1.00 38.15 C
ATOM 19 N4 C A 967 61.840 67.075 114.152 1.00 36.23 N
ATOM 20 C5 C A 967 63.501 66.890 112.464 1.00 37.58 C
ATOM 21 C6 C A 967 64.467 66.156 111.931 1.00 39.20 C
ATOM 22 P U A 968 64.470 62.092 107.781 1.00 42.20 P
ATOM 23 OP1 U A 968 65.077 61.165 106.806 1.00 41.74 O
ATOM 24 OP2 U A 968 63.464 63.089 107.309 1.00 42.60 O
ATOM 25 O5' U A 968 63.790 61.191 108.917 1.00 42.17 O
TER
ATOM 1 O3' A B 964 62.799 71.843 114.476 1.00 41.28 O
ATOM 2 P A B 965 61.516 71.415 113.595 1.00 41.92 P
ATOM 3 OP1 A B 965 60.412 72.379 113.878 1.00 41.87 O
ATOM 4 OP2 A B 965 61.292 69.973 113.856 1.00 41.08 O
ATOM 5 O5' A B 965 62.004 71.648 112.082 1.00 41.68 O
ATOM 6 C5' A B 965 62.371 72.984 111.614 1.00 41.38 C
ATOM 7 C4' A B 965 62.659 73.009 110.119 1.00 40.75 C
ATOM 8 O4' A B 965 62.832 74.384 109.699 1.00 41.77 O
ATOM 9 C3' A B 965 63.957 72.368 109.690 1.00 41.92 C
ATOM 10 O3' A B 965 63.775 70.963 109.610 1.00 42.10 O
ATOM 11 C2' A B 965 64.248 73.034 108.342 1.00 41.91 C
ATOM 12 O2' A B 965 63.526 72.502 107.248 1.00 42.63 O
ATOM 13 C1' A B 965 63.731 74.449 108.594 1.00 42.59 C
ATOM 14 N9 A B 965 64.728 75.512 108.826 1.00 43.01 N
ATOM 15 C8 A B 965 64.966 76.215 109.988 1.00 43.66 C
ATOM 16 N7 A B 965 65.889 77.139 109.870 1.00 43.39 N
ATOM 17 C5 A B 965 66.298 77.037 108.548 1.00 42.07 C
ATOM 18 C6 A B 965 67.254 77.749 107.791 1.00 41.46 C
ATOM 19 N6 A B 965 67.996 78.751 108.267 1.00 41.08 N
ATOM 20 N1 A B 965 67.420 77.394 106.500 1.00 41.14 N
ATOM 21 C2 A B 965 66.675 76.397 106.008 1.00 42.24 C
ATOM 22 N3 A B 965 65.749 75.659 106.614 1.00 42.24 N
ATOM 23 C4 A B 965 65.603 76.033 107.896 1.00 42.36 C
ATOM 24 P A B 966 65.015 69.974 109.893 1.00 42.07 P
ATOM 25 OP1 A B 966 64.370 68.652 109.956 1.00 40.86 O
ATOM 26 OP2 A B 966 65.888 70.429 111.024 1.00 39.04 O
ATOM 27 O5' A B 966 65.889 70.040 108.563 1.00 39.48 O
TER
Atoms:
C2: (64.007,64.360,113.458)
OP1: (69.064,67.355,108.551)
OP2: (69.451,65.756,106.582)
C4: (62.784,66.340,113.552)
O5': (67.231,65.871,107.690)
C3': (65.469,63.769,109.563)
C1': (65.870,64.138,111.861)
O4': (66.693,65.042,111.154)
C5': (66.589,66.031,108.966)
P: (68.559,66.678,107.323)
O2: (64.263,63.206,113.845)
C4': (66.637,64.737,109.743)
C2': (65.449,63.031,110.895)
O2': (66.436,62.022,110.963)
N1: (64.755,64.908,112.414)
N3: (63.027,65.106,114.012)
N4: (61.840,67.075,114.152)
C6: (64.467,66.156,111.931)
C5: (63.501,66.890,112.464)
O3': (65.705,62.852,108.495)
OP1: (69.064,67.355,108.551)
OP2: (69.451,65.756,106.582)
C4: (62.784,66.340,113.552)
O5': (67.231,65.871,107.690)
C3': (65.469,63.769,109.563)
C1': (65.870,64.138,111.861)
O4': (66.693,65.042,111.154)
C5': (66.589,66.031,108.966)
P: (68.559,66.678,107.323)
O2: (64.263,63.206,113.845)
C4': (66.637,64.737,109.743)
C2': (65.449,63.031,110.895)
O2': (66.436,62.022,110.963)
N1: (64.755,64.908,112.414)
N3: (63.027,65.106,114.012)
N4: (61.840,67.075,114.152)
C6: (64.467,66.156,111.931)
C5: (63.501,66.890,112.464)
O3': (65.705,62.852,108.495)
OP1: (60.412,72.379,113.878)
OP2: (61.292,69.973,113.856)
C3': (63.957,72.368,109.690)
C1': (63.731,74.449,108.594)
C5': (62.371,72.984,111.614)
O4': (62.832,74.384,109.699)
C8: (64.966,76.215,109.988)
O2': (63.526,72.502,107.248)
C6: (67.254,77.749,107.791)
C5: (66.298,77.037,108.548)
C4: (65.603,76.033,107.896)
P: (61.516,71.415,113.595)
C4': (62.659,73.009,110.119)
C2': (64.248,73.034,108.342)
C2: (66.675,76.397,106.008)
N1: (67.420,77.394,106.500)
N3: (65.749,75.659,106.614)
N6: (67.996,78.751,108.267)
N7: (65.889,77.139,109.870)
N9: (64.728,75.512,108.826)
O5': (62.004,71.648,112.082)
O3': (63.775,70.963,109.610)
OP2: (61.292,69.973,113.856)
C3': (63.957,72.368,109.690)
C1': (63.731,74.449,108.594)
C5': (62.371,72.984,111.614)
O4': (62.832,74.384,109.699)
C8: (64.966,76.215,109.988)
O2': (63.526,72.502,107.248)
C6: (67.254,77.749,107.791)
C5: (66.298,77.037,108.548)
C4: (65.603,76.033,107.896)
P: (61.516,71.415,113.595)
C4': (62.659,73.009,110.119)
C2': (64.248,73.034,108.342)
C2: (66.675,76.397,106.008)
N1: (67.420,77.394,106.500)
N3: (65.749,75.659,106.614)
N6: (67.996,78.751,108.267)
N7: (65.889,77.139,109.870)
N9: (64.728,75.512,108.826)
O5': (62.004,71.648,112.082)
O3': (63.775,70.963,109.610)
Image (generated by PyMOL):