Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1343:1346
Extra
PDB:
ATOM 1 O3' G A 342 69.096 -5.980 94.776 1.00 37.31 O
ATOM 2 P C A 343 67.581 -6.240 95.116 1.00 37.75 P
ATOM 3 OP1 C A 343 67.443 -7.642 95.563 1.00 37.81 O
ATOM 4 OP2 C A 343 66.822 -5.788 93.941 1.00 37.42 O
ATOM 5 O5' C A 343 67.318 -5.246 96.339 1.00 37.99 O
ATOM 6 C5' C A 343 66.208 -4.354 96.363 1.00 37.88 C
ATOM 7 C4' C A 343 65.667 -4.254 97.754 1.00 38.12 C
ATOM 8 O4' C A 343 66.728 -3.887 98.654 1.00 38.47 O
ATOM 9 C3' C A 343 64.602 -3.210 98.017 1.00 38.08 C
ATOM 10 O3' C A 343 63.315 -3.625 97.586 1.00 37.81 O
ATOM 11 C2' C A 343 64.687 -3.063 99.531 1.00 38.44 C
ATOM 12 O2' C A 343 63.962 -4.103 100.157 1.00 38.46 O
ATOM 13 C1' C A 343 66.182 -3.302 99.798 1.00 38.68 C
ATOM 14 N1 C A 343 66.895 -2.066 100.109 1.00 38.90 N
ATOM 15 C2 C A 343 67.153 -1.821 101.459 1.00 39.28 C
ATOM 16 O2 C A 343 66.870 -2.664 102.302 1.00 39.41 O
ATOM 17 N3 C A 343 67.751 -0.693 101.866 1.00 39.52 N
ATOM 18 C4 C A 343 68.078 0.199 100.957 1.00 39.39 C
ATOM 19 N4 C A 343 68.674 1.291 101.420 1.00 39.65 N
ATOM 20 C5 C A 343 67.783 -0.006 99.558 1.00 39.00 C
ATOM 21 C6 C A 343 67.192 -1.142 99.167 1.00 38.76 C
ATOM 22 P G A 344 62.559 -2.870 96.395 1.00 39.67 P
ATOM 23 OP1 G A 344 61.373 -3.656 96.099 1.00 39.45 O
ATOM 24 OP2 G A 344 63.545 -2.619 95.307 1.00 39.56 O
ATOM 25 O5' G A 344 62.146 -1.512 97.037 1.00 39.82 O
TER
ATOM 1 O3' A B 345 68.037 5.175 99.624 1.00 37.09 O
ATOM 2 P A B 346 69.497 4.555 99.298 1.00 43.66 P
ATOM 3 OP1 A B 346 70.022 5.236 98.089 1.00 43.51 O
ATOM 4 OP2 A B 346 69.387 3.094 99.284 1.00 43.52 O
ATOM 5 O5' A B 346 70.316 5.001 100.560 1.00 44.12 O
ATOM 6 C5' A B 346 70.944 4.047 101.378 1.00 44.34 C
ATOM 7 C4' A B 346 72.389 4.381 101.562 1.00 44.64 C
ATOM 8 O4' A B 346 73.173 3.666 100.582 1.00 44.46 O
ATOM 9 C3' A B 346 72.750 5.842 101.390 1.00 44.78 C
ATOM 10 O3' A B 346 73.854 6.089 102.222 1.00 45.19 O
ATOM 11 C2' A B 346 73.216 5.903 99.934 1.00 44.49 C
ATOM 12 O2' A B 346 74.085 6.967 99.649 1.00 44.67 O
ATOM 13 C1' A B 346 73.930 4.576 99.806 1.00 44.46 C
ATOM 14 N9 A B 346 74.017 4.025 98.453 1.00 44.10 N
ATOM 15 C8 A B 346 73.105 3.940 97.413 1.00 43.71 C
ATOM 16 N7 A B 346 73.553 3.282 96.349 1.00 43.49 N
ATOM 17 C5 A B 346 74.812 2.828 96.750 1.00 43.75 C
ATOM 18 C6 A B 346 75.817 2.066 96.113 1.00 43.73 C
ATOM 19 N6 A B 346 75.714 1.551 94.890 1.00 43.41 N
ATOM 20 N1 A B 346 76.964 1.837 96.803 1.00 44.06 N
ATOM 21 C2 A B 346 77.079 2.335 98.043 1.00 44.40 C
ATOM 22 N3 A B 346 76.229 3.073 98.748 1.00 44.47 N
ATOM 23 C4 A B 346 75.100 3.278 98.044 1.00 44.13 C
ATOM 24 P C B 347 73.680 6.755 103.664 1.00 45.07 P
ATOM 25 OP1 C B 347 75.070 6.970 104.217 1.00 45.47 O
ATOM 26 OP2 C B 347 72.722 5.914 104.440 1.00 45.04 O
ATOM 27 O5' C B 347 73.031 8.137 103.307 1.00 45.01 O
TER
ATOM 2 P C A 343 67.581 -6.240 95.116 1.00 37.75 P
ATOM 3 OP1 C A 343 67.443 -7.642 95.563 1.00 37.81 O
ATOM 4 OP2 C A 343 66.822 -5.788 93.941 1.00 37.42 O
ATOM 5 O5' C A 343 67.318 -5.246 96.339 1.00 37.99 O
ATOM 6 C5' C A 343 66.208 -4.354 96.363 1.00 37.88 C
ATOM 7 C4' C A 343 65.667 -4.254 97.754 1.00 38.12 C
ATOM 8 O4' C A 343 66.728 -3.887 98.654 1.00 38.47 O
ATOM 9 C3' C A 343 64.602 -3.210 98.017 1.00 38.08 C
ATOM 10 O3' C A 343 63.315 -3.625 97.586 1.00 37.81 O
ATOM 11 C2' C A 343 64.687 -3.063 99.531 1.00 38.44 C
ATOM 12 O2' C A 343 63.962 -4.103 100.157 1.00 38.46 O
ATOM 13 C1' C A 343 66.182 -3.302 99.798 1.00 38.68 C
ATOM 14 N1 C A 343 66.895 -2.066 100.109 1.00 38.90 N
ATOM 15 C2 C A 343 67.153 -1.821 101.459 1.00 39.28 C
ATOM 16 O2 C A 343 66.870 -2.664 102.302 1.00 39.41 O
ATOM 17 N3 C A 343 67.751 -0.693 101.866 1.00 39.52 N
ATOM 18 C4 C A 343 68.078 0.199 100.957 1.00 39.39 C
ATOM 19 N4 C A 343 68.674 1.291 101.420 1.00 39.65 N
ATOM 20 C5 C A 343 67.783 -0.006 99.558 1.00 39.00 C
ATOM 21 C6 C A 343 67.192 -1.142 99.167 1.00 38.76 C
ATOM 22 P G A 344 62.559 -2.870 96.395 1.00 39.67 P
ATOM 23 OP1 G A 344 61.373 -3.656 96.099 1.00 39.45 O
ATOM 24 OP2 G A 344 63.545 -2.619 95.307 1.00 39.56 O
ATOM 25 O5' G A 344 62.146 -1.512 97.037 1.00 39.82 O
TER
ATOM 1 O3' A B 345 68.037 5.175 99.624 1.00 37.09 O
ATOM 2 P A B 346 69.497 4.555 99.298 1.00 43.66 P
ATOM 3 OP1 A B 346 70.022 5.236 98.089 1.00 43.51 O
ATOM 4 OP2 A B 346 69.387 3.094 99.284 1.00 43.52 O
ATOM 5 O5' A B 346 70.316 5.001 100.560 1.00 44.12 O
ATOM 6 C5' A B 346 70.944 4.047 101.378 1.00 44.34 C
ATOM 7 C4' A B 346 72.389 4.381 101.562 1.00 44.64 C
ATOM 8 O4' A B 346 73.173 3.666 100.582 1.00 44.46 O
ATOM 9 C3' A B 346 72.750 5.842 101.390 1.00 44.78 C
ATOM 10 O3' A B 346 73.854 6.089 102.222 1.00 45.19 O
ATOM 11 C2' A B 346 73.216 5.903 99.934 1.00 44.49 C
ATOM 12 O2' A B 346 74.085 6.967 99.649 1.00 44.67 O
ATOM 13 C1' A B 346 73.930 4.576 99.806 1.00 44.46 C
ATOM 14 N9 A B 346 74.017 4.025 98.453 1.00 44.10 N
ATOM 15 C8 A B 346 73.105 3.940 97.413 1.00 43.71 C
ATOM 16 N7 A B 346 73.553 3.282 96.349 1.00 43.49 N
ATOM 17 C5 A B 346 74.812 2.828 96.750 1.00 43.75 C
ATOM 18 C6 A B 346 75.817 2.066 96.113 1.00 43.73 C
ATOM 19 N6 A B 346 75.714 1.551 94.890 1.00 43.41 N
ATOM 20 N1 A B 346 76.964 1.837 96.803 1.00 44.06 N
ATOM 21 C2 A B 346 77.079 2.335 98.043 1.00 44.40 C
ATOM 22 N3 A B 346 76.229 3.073 98.748 1.00 44.47 N
ATOM 23 C4 A B 346 75.100 3.278 98.044 1.00 44.13 C
ATOM 24 P C B 347 73.680 6.755 103.664 1.00 45.07 P
ATOM 25 OP1 C B 347 75.070 6.970 104.217 1.00 45.47 O
ATOM 26 OP2 C B 347 72.722 5.914 104.440 1.00 45.04 O
ATOM 27 O5' C B 347 73.031 8.137 103.307 1.00 45.01 O
TER
Atoms:
C2: (67.153,-1.821,101.459)
OP1: (67.443,-7.642,95.563)
OP2: (66.822,-5.788,93.941)
C4: (68.078,0.199,100.957)
O5': (67.318,-5.246,96.339)
C3': (64.602,-3.210,98.017)
C1': (66.182,-3.302,99.798)
O4': (66.728,-3.887,98.654)
C5': (66.208,-4.354,96.363)
P: (67.581,-6.240,95.116)
O2: (66.870,-2.664,102.302)
C4': (65.667,-4.254,97.754)
C2': (64.687,-3.063,99.531)
O2': (63.962,-4.103,100.157)
N1: (66.895,-2.066,100.109)
N3: (67.751,-0.693,101.866)
N4: (68.674,1.291,101.420)
C6: (67.192,-1.142,99.167)
C5: (67.783,-0.006,99.558)
O3': (63.315,-3.625,97.586)
OP1: (67.443,-7.642,95.563)
OP2: (66.822,-5.788,93.941)
C4: (68.078,0.199,100.957)
O5': (67.318,-5.246,96.339)
C3': (64.602,-3.210,98.017)
C1': (66.182,-3.302,99.798)
O4': (66.728,-3.887,98.654)
C5': (66.208,-4.354,96.363)
P: (67.581,-6.240,95.116)
O2: (66.870,-2.664,102.302)
C4': (65.667,-4.254,97.754)
C2': (64.687,-3.063,99.531)
O2': (63.962,-4.103,100.157)
N1: (66.895,-2.066,100.109)
N3: (67.751,-0.693,101.866)
N4: (68.674,1.291,101.420)
C6: (67.192,-1.142,99.167)
C5: (67.783,-0.006,99.558)
O3': (63.315,-3.625,97.586)
OP1: (70.022,5.236,98.089)
OP2: (69.387,3.094,99.284)
C3': (72.750,5.842,101.390)
C1': (73.930,4.576,99.806)
C5': (70.944,4.047,101.378)
O4': (73.173,3.666,100.582)
C8: (73.105,3.940,97.413)
O2': (74.085,6.967,99.649)
C6: (75.817,2.066,96.113)
C5: (74.812,2.828,96.750)
C4: (75.100,3.278,98.044)
P: (69.497,4.555,99.298)
C4': (72.389,4.381,101.562)
C2': (73.216,5.903,99.934)
C2: (77.079,2.335,98.043)
N1: (76.964,1.837,96.803)
N3: (76.229,3.073,98.748)
N6: (75.714,1.551,94.890)
N7: (73.553,3.282,96.349)
N9: (74.017,4.025,98.453)
O5': (70.316,5.001,100.560)
O3': (73.854,6.089,102.222)
OP2: (69.387,3.094,99.284)
C3': (72.750,5.842,101.390)
C1': (73.930,4.576,99.806)
C5': (70.944,4.047,101.378)
O4': (73.173,3.666,100.582)
C8: (73.105,3.940,97.413)
O2': (74.085,6.967,99.649)
C6: (75.817,2.066,96.113)
C5: (74.812,2.828,96.750)
C4: (75.100,3.278,98.044)
P: (69.497,4.555,99.298)
C4': (72.389,4.381,101.562)
C2': (73.216,5.903,99.934)
C2: (77.079,2.335,98.043)
N1: (76.964,1.837,96.803)
N3: (76.229,3.073,98.748)
N6: (75.714,1.551,94.890)
N7: (73.553,3.282,96.349)
N9: (74.017,4.025,98.453)
O5': (70.316,5.001,100.560)
O3': (73.854,6.089,102.222)
Image (generated by PyMOL):