ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1EFW:D12:D8

Extra

PDB:
ATOM 1 O3' U A 11 44.226 156.026 -0.356 1.00 43.37 O
ATOM 2 P C A 12 45.720 156.302 0.158 1.00 48.08 P
ATOM 3 OP1 C A 12 45.700 156.627 1.608 1.00 48.60 O
ATOM 4 OP2 C A 12 46.378 157.329 -0.687 1.00 46.39 O
ATOM 5 O5' C A 12 46.445 154.892 -0.104 1.00 49.52 O
ATOM 6 C5' C A 12 46.122 153.787 0.752 1.00 46.55 C
ATOM 7 C4' C A 12 46.202 152.436 0.000 1.00 46.71 C
ATOM 8 O4' C A 12 45.932 152.606 -1.446 1.00 45.57 O
ATOM 9 C3' C A 12 47.574 151.750 -0.005 1.00 46.04 C
ATOM 10 O3' C A 12 47.840 151.013 1.184 1.00 46.30 O
ATOM 11 C2' C A 12 47.467 150.798 -1.177 1.00 45.47 C
ATOM 12 O2' C A 12 46.833 149.591 -0.790 1.00 42.19 O
ATOM 13 C1' C A 12 46.652 151.590 -2.184 1.00 44.61 C
ATOM 14 N1 C A 12 47.532 152.131 -3.249 1.00 42.99 N
ATOM 15 C2 C A 12 47.931 151.221 -4.231 1.00 42.76 C
ATOM 16 O2 C A 12 47.578 150.037 -4.126 1.00 42.95 O
ATOM 17 N3 C A 12 48.692 151.655 -5.272 1.00 41.38 N
ATOM 18 C4 C A 12 49.073 152.937 -5.333 1.00 42.36 C
ATOM 19 N4 C A 12 49.797 153.320 -6.371 1.00 43.03 N
ATOM 20 C5 C A 12 48.708 153.891 -4.311 1.00 42.49 C
ATOM 21 C6 C A 12 47.936 153.440 -3.290 1.00 42.34 C
ATOM 22 P A A 13 49.349 150.589 1.526 1.00 45.91 P
ATOM 23 OP1 A A 13 49.426 150.123 2.935 1.00 44.15 O
ATOM 24 OP2 A A 13 50.261 151.702 1.190 1.00 44.20 O
ATOM 25 O5' A A 13 49.651 149.349 0.513 1.00 47.10 O
TER

ATOM 1 P A B 8 51.675 156.401 -8.842 1.00 40.68 P
ATOM 2 OP1 A B 8 51.312 157.796 -9.189 1.00 43.50 O
ATOM 3 OP2 A B 8 50.874 155.661 -7.824 1.00 37.40 O
ATOM 4 O5' A B 8 51.683 155.553 -10.173 1.00 40.23 O
ATOM 5 C5' A B 8 50.476 155.129 -10.709 1.00 42.10 C
ATOM 6 C4' A B 8 50.462 155.357 -12.178 1.00 43.55 C
ATOM 7 O4' A B 8 50.469 154.056 -12.795 1.00 41.19 O
ATOM 8 C3' A B 8 49.146 156.000 -12.567 1.00 46.58 C
ATOM 9 O3' A B 8 49.281 156.681 -13.809 1.00 48.04 O
ATOM 10 C2' A B 8 48.213 154.804 -12.645 1.00 45.51 C
ATOM 11 O2' A B 8 47.105 155.002 -13.499 1.00 48.84 O
ATOM 12 C1' A B 8 49.151 153.679 -13.100 1.00 42.33 C
ATOM 13 N9 A B 8 48.874 152.449 -12.373 1.00 39.65 N
ATOM 14 C8 A B 8 48.438 152.313 -11.077 1.00 41.42 C
ATOM 15 N7 A B 8 48.161 151.079 -10.739 1.00 39.77 N
ATOM 16 C5 A B 8 48.461 150.351 -11.879 1.00 39.51 C
ATOM 17 C6 A B 8 48.357 148.992 -12.182 1.00 39.48 C
ATOM 18 N6 A B 8 47.857 148.087 -11.339 1.00 38.17 N
ATOM 19 N1 A B 8 48.768 148.585 -13.402 1.00 41.02 N
ATOM 20 C2 A B 8 49.233 149.497 -14.256 1.00 40.27 C
ATOM 21 N3 A B 8 49.354 150.810 -14.101 1.00 39.77 N
ATOM 22 C4 A B 8 48.942 151.176 -12.877 1.00 39.78 C
ATOM 23 P G B 9 49.376 158.281 -13.829 1.00 48.28 P
ATOM 24 OP1 G B 9 49.754 158.678 -15.208 1.00 47.70 O
ATOM 25 OP2 G B 9 50.237 158.676 -12.685 1.00 46.47 O
ATOM 26 O5' G B 9 47.882 158.755 -13.527 1.00 48.47 O
TER

Atoms:
C2: (47.931,151.221,-4.231)
OP1: (45.700,156.627,1.608)
OP2: (46.378,157.329,-0.687)
C4: (49.073,152.937,-5.333)
O5': (46.445,154.892,-0.104)
C3': (47.574,151.750,-0.005)
C1': (46.652,151.590,-2.184)
O4': (45.932,152.606,-1.446)
C5': (46.122,153.787,0.752)
P: (45.720,156.302,0.158)
O2: (47.578,150.037,-4.126)
C4': (46.202,152.436,0.000)
C2': (47.467,150.798,-1.177)
O2': (46.833,149.591,-0.790)
N1: (47.532,152.131,-3.249)
N3: (48.692,151.655,-5.272)
N4: (49.797,153.320,-6.371)
C6: (47.936,153.440,-3.290)
C5: (48.708,153.891,-4.311)
O3': (47.840,151.013,1.184)
OP1: (51.312,157.796,-9.189)
OP2: (50.874,155.661,-7.824)
C3': (49.146,156.000,-12.567)
C1': (49.151,153.679,-13.100)
C5': (50.476,155.129,-10.709)
O4': (50.469,154.056,-12.795)
C8: (48.438,152.313,-11.077)
O2': (47.105,155.002,-13.499)
C6: (48.357,148.992,-12.182)
C5: (48.461,150.351,-11.879)
C4: (48.942,151.176,-12.877)
P: (51.675,156.401,-8.842)
C4': (50.462,155.357,-12.178)
C2': (48.213,154.804,-12.645)
C2: (49.233,149.497,-14.256)
N1: (48.768,148.585,-13.402)
N3: (49.354,150.810,-14.101)
N6: (47.857,148.087,-11.339)
N7: (48.161,151.079,-10.739)
N9: (48.874,152.449,-12.373)
O5': (51.683,155.553,-10.173)
O3': (49.281,156.681,-13.809)
Image (generated by PyMOL):
PyMOL image
show in jmol