Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A905:A903
Extra
PDB:
ATOM 1 O3' A A 904 -128.503 -54.882 11.045 1.00 0.01 O
ATOM 2 P C A 905 -129.548 -54.021 10.206 1.00 0.01 P
ATOM 3 OP1 C A 905 -128.777 -53.053 9.433 1.00 0.01 O
ATOM 4 OP2 C A 905 -130.572 -53.524 11.152 1.00 0.01 O
ATOM 5 O5' C A 905 -130.175 -55.078 9.229 1.00 0.01 O
ATOM 6 C5' C A 905 -131.119 -56.006 9.683 1.00 0.01 C
ATOM 7 C4' C A 905 -132.398 -55.873 8.925 1.00 0.01 C
ATOM 8 O4' C A 905 -132.149 -56.038 7.518 1.00 0.01 O
ATOM 9 C3' C A 905 -133.443 -56.910 9.225 1.00 0.01 C
ATOM 10 O3' C A 905 -134.142 -56.637 10.414 1.00 0.01 O
ATOM 11 C2' C A 905 -134.306 -56.877 7.981 1.00 0.01 C
ATOM 12 O2' C A 905 -135.178 -55.760 8.007 1.00 0.01 O
ATOM 13 C1' C A 905 -133.264 -56.632 6.908 1.00 0.01 C
ATOM 14 N1 C A 905 -132.831 -57.865 6.200 1.00 0.01 N
ATOM 15 C2 C A 905 -133.771 -58.561 5.487 1.00 0.01 C
ATOM 16 O2 C A 905 -134.923 -58.162 5.585 1.00 0.01 O
ATOM 17 N3 C A 905 -133.401 -59.624 4.756 1.00 0.01 N
ATOM 18 C4 C A 905 -132.132 -59.987 4.684 1.00 0.01 C
ATOM 19 N4 C A 905 -131.817 -61.044 3.952 1.00 0.01 N
ATOM 20 C5 C A 905 -131.127 -59.292 5.379 1.00 0.01 C
ATOM 21 C6 C A 905 -131.520 -58.244 6.104 1.00 0.01 C
ATOM 22 P U A 906 -134.464 -57.831 11.412 1.00 0.01 P
ATOM 23 OP1 U A 906 -134.988 -57.238 12.641 1.00 0.01 O
ATOM 24 OP2 U A 906 -133.260 -58.693 11.495 1.00 0.01 O
ATOM 25 O5' U A 906 -135.600 -58.581 10.645 1.00 0.01 O
TER
ATOM 1 O3' A B 902 -127.005 -60.470 2.528 1.00 0.01 O
ATOM 2 P A B 903 -127.283 -61.608 3.567 1.00 0.01 P
ATOM 3 OP1 A B 903 -126.473 -62.760 3.155 1.00 0.01 O
ATOM 4 OP2 A B 903 -128.726 -61.751 3.669 1.00 0.01 O
ATOM 5 O5' A B 903 -126.712 -60.998 4.901 1.00 0.01 O
ATOM 6 C5' A B 903 -125.399 -60.487 4.954 1.00 0.01 C
ATOM 7 C4' A B 903 -124.940 -60.267 6.365 1.00 0.01 C
ATOM 8 O4' A B 903 -123.517 -60.103 6.374 1.00 0.01 O
ATOM 9 C3' A B 903 -125.469 -59.022 7.054 1.00 0.01 C
ATOM 10 O3' A B 903 -126.725 -59.239 7.657 1.00 0.01 O
ATOM 11 C2' A B 903 -124.384 -58.694 8.064 1.00 0.01 C
ATOM 12 O2' A B 903 -124.580 -59.427 9.246 1.00 0.01 O
ATOM 13 C1' A B 903 -123.133 -59.218 7.388 1.00 0.01 C
ATOM 14 N9 A B 903 -122.327 -58.157 6.791 1.00 0.01 N
ATOM 15 C8 A B 903 -122.196 -57.908 5.469 1.00 0.01 C
ATOM 16 N7 A B 903 -121.372 -56.930 5.234 1.00 0.01 N
ATOM 17 C5 A B 903 -120.940 -56.522 6.464 1.00 0.01 C
ATOM 18 C6 A B 903 -120.072 -55.533 6.855 1.00 0.01 C
ATOM 19 N6 A B 903 -119.454 -54.748 6.026 1.00 0.01 N
ATOM 20 N1 A B 903 -119.823 -55.367 8.129 1.00 0.01 N
ATOM 21 C2 A B 903 -120.438 -56.177 8.968 1.00 0.01 C
ATOM 22 N3 A B 903 -121.297 -57.154 8.731 1.00 0.01 N
ATOM 23 C4 A B 903 -121.510 -57.277 7.431 1.00 0.01 C
ATOM 24 P A B 904 -127.882 -58.143 7.562 1.00 0.01 P
ATOM 25 OP1 A B 904 -129.135 -58.818 7.914 1.00 0.01 O
ATOM 26 OP2 A B 904 -127.772 -57.490 6.239 1.00 0.01 O
ATOM 27 O5' A B 904 -127.487 -57.136 8.698 1.00 0.01 O
TER
ATOM 2 P C A 905 -129.548 -54.021 10.206 1.00 0.01 P
ATOM 3 OP1 C A 905 -128.777 -53.053 9.433 1.00 0.01 O
ATOM 4 OP2 C A 905 -130.572 -53.524 11.152 1.00 0.01 O
ATOM 5 O5' C A 905 -130.175 -55.078 9.229 1.00 0.01 O
ATOM 6 C5' C A 905 -131.119 -56.006 9.683 1.00 0.01 C
ATOM 7 C4' C A 905 -132.398 -55.873 8.925 1.00 0.01 C
ATOM 8 O4' C A 905 -132.149 -56.038 7.518 1.00 0.01 O
ATOM 9 C3' C A 905 -133.443 -56.910 9.225 1.00 0.01 C
ATOM 10 O3' C A 905 -134.142 -56.637 10.414 1.00 0.01 O
ATOM 11 C2' C A 905 -134.306 -56.877 7.981 1.00 0.01 C
ATOM 12 O2' C A 905 -135.178 -55.760 8.007 1.00 0.01 O
ATOM 13 C1' C A 905 -133.264 -56.632 6.908 1.00 0.01 C
ATOM 14 N1 C A 905 -132.831 -57.865 6.200 1.00 0.01 N
ATOM 15 C2 C A 905 -133.771 -58.561 5.487 1.00 0.01 C
ATOM 16 O2 C A 905 -134.923 -58.162 5.585 1.00 0.01 O
ATOM 17 N3 C A 905 -133.401 -59.624 4.756 1.00 0.01 N
ATOM 18 C4 C A 905 -132.132 -59.987 4.684 1.00 0.01 C
ATOM 19 N4 C A 905 -131.817 -61.044 3.952 1.00 0.01 N
ATOM 20 C5 C A 905 -131.127 -59.292 5.379 1.00 0.01 C
ATOM 21 C6 C A 905 -131.520 -58.244 6.104 1.00 0.01 C
ATOM 22 P U A 906 -134.464 -57.831 11.412 1.00 0.01 P
ATOM 23 OP1 U A 906 -134.988 -57.238 12.641 1.00 0.01 O
ATOM 24 OP2 U A 906 -133.260 -58.693 11.495 1.00 0.01 O
ATOM 25 O5' U A 906 -135.600 -58.581 10.645 1.00 0.01 O
TER
ATOM 1 O3' A B 902 -127.005 -60.470 2.528 1.00 0.01 O
ATOM 2 P A B 903 -127.283 -61.608 3.567 1.00 0.01 P
ATOM 3 OP1 A B 903 -126.473 -62.760 3.155 1.00 0.01 O
ATOM 4 OP2 A B 903 -128.726 -61.751 3.669 1.00 0.01 O
ATOM 5 O5' A B 903 -126.712 -60.998 4.901 1.00 0.01 O
ATOM 6 C5' A B 903 -125.399 -60.487 4.954 1.00 0.01 C
ATOM 7 C4' A B 903 -124.940 -60.267 6.365 1.00 0.01 C
ATOM 8 O4' A B 903 -123.517 -60.103 6.374 1.00 0.01 O
ATOM 9 C3' A B 903 -125.469 -59.022 7.054 1.00 0.01 C
ATOM 10 O3' A B 903 -126.725 -59.239 7.657 1.00 0.01 O
ATOM 11 C2' A B 903 -124.384 -58.694 8.064 1.00 0.01 C
ATOM 12 O2' A B 903 -124.580 -59.427 9.246 1.00 0.01 O
ATOM 13 C1' A B 903 -123.133 -59.218 7.388 1.00 0.01 C
ATOM 14 N9 A B 903 -122.327 -58.157 6.791 1.00 0.01 N
ATOM 15 C8 A B 903 -122.196 -57.908 5.469 1.00 0.01 C
ATOM 16 N7 A B 903 -121.372 -56.930 5.234 1.00 0.01 N
ATOM 17 C5 A B 903 -120.940 -56.522 6.464 1.00 0.01 C
ATOM 18 C6 A B 903 -120.072 -55.533 6.855 1.00 0.01 C
ATOM 19 N6 A B 903 -119.454 -54.748 6.026 1.00 0.01 N
ATOM 20 N1 A B 903 -119.823 -55.367 8.129 1.00 0.01 N
ATOM 21 C2 A B 903 -120.438 -56.177 8.968 1.00 0.01 C
ATOM 22 N3 A B 903 -121.297 -57.154 8.731 1.00 0.01 N
ATOM 23 C4 A B 903 -121.510 -57.277 7.431 1.00 0.01 C
ATOM 24 P A B 904 -127.882 -58.143 7.562 1.00 0.01 P
ATOM 25 OP1 A B 904 -129.135 -58.818 7.914 1.00 0.01 O
ATOM 26 OP2 A B 904 -127.772 -57.490 6.239 1.00 0.01 O
ATOM 27 O5' A B 904 -127.487 -57.136 8.698 1.00 0.01 O
TER
Atoms:
C2: (-133.771,-58.561,5.487)
OP1: (-128.777,-53.053,9.433)
OP2: (-130.572,-53.524,11.152)
C4: (-132.132,-59.987,4.684)
O5': (-130.175,-55.078,9.229)
C3': (-133.443,-56.910,9.225)
C1': (-133.264,-56.632,6.908)
O4': (-132.149,-56.038,7.518)
C5': (-131.119,-56.006,9.683)
P: (-129.548,-54.021,10.206)
O2: (-134.923,-58.162,5.585)
C4': (-132.398,-55.873,8.925)
C2': (-134.306,-56.877,7.981)
O2': (-135.178,-55.760,8.007)
N1: (-132.831,-57.865,6.200)
N3: (-133.401,-59.624,4.756)
N4: (-131.817,-61.044,3.952)
C6: (-131.520,-58.244,6.104)
C5: (-131.127,-59.292,5.379)
O3': (-134.142,-56.637,10.414)
OP1: (-128.777,-53.053,9.433)
OP2: (-130.572,-53.524,11.152)
C4: (-132.132,-59.987,4.684)
O5': (-130.175,-55.078,9.229)
C3': (-133.443,-56.910,9.225)
C1': (-133.264,-56.632,6.908)
O4': (-132.149,-56.038,7.518)
C5': (-131.119,-56.006,9.683)
P: (-129.548,-54.021,10.206)
O2: (-134.923,-58.162,5.585)
C4': (-132.398,-55.873,8.925)
C2': (-134.306,-56.877,7.981)
O2': (-135.178,-55.760,8.007)
N1: (-132.831,-57.865,6.200)
N3: (-133.401,-59.624,4.756)
N4: (-131.817,-61.044,3.952)
C6: (-131.520,-58.244,6.104)
C5: (-131.127,-59.292,5.379)
O3': (-134.142,-56.637,10.414)
OP1: (-126.473,-62.760,3.155)
OP2: (-128.726,-61.751,3.669)
C3': (-125.469,-59.022,7.054)
C1': (-123.133,-59.218,7.388)
C5': (-125.399,-60.487,4.954)
O4': (-123.517,-60.103,6.374)
C8: (-122.196,-57.908,5.469)
O2': (-124.580,-59.427,9.246)
C6: (-120.072,-55.533,6.855)
C5: (-120.940,-56.522,6.464)
C4: (-121.510,-57.277,7.431)
P: (-127.283,-61.608,3.567)
C4': (-124.940,-60.267,6.365)
C2': (-124.384,-58.694,8.064)
C2: (-120.438,-56.177,8.968)
N1: (-119.823,-55.367,8.129)
N3: (-121.297,-57.154,8.731)
N6: (-119.454,-54.748,6.026)
N7: (-121.372,-56.930,5.234)
N9: (-122.327,-58.157,6.791)
O5': (-126.712,-60.998,4.901)
O3': (-126.725,-59.239,7.657)
OP2: (-128.726,-61.751,3.669)
C3': (-125.469,-59.022,7.054)
C1': (-123.133,-59.218,7.388)
C5': (-125.399,-60.487,4.954)
O4': (-123.517,-60.103,6.374)
C8: (-122.196,-57.908,5.469)
O2': (-124.580,-59.427,9.246)
C6: (-120.072,-55.533,6.855)
C5: (-120.940,-56.522,6.464)
C4: (-121.510,-57.277,7.431)
P: (-127.283,-61.608,3.567)
C4': (-124.940,-60.267,6.365)
C2': (-124.384,-58.694,8.064)
C2: (-120.438,-56.177,8.968)
N1: (-119.823,-55.367,8.129)
N3: (-121.297,-57.154,8.731)
N6: (-119.454,-54.748,6.026)
N7: (-121.372,-56.930,5.234)
N9: (-122.327,-58.157,6.791)
O5': (-126.712,-60.998,4.901)
O3': (-126.725,-59.239,7.657)
Image (generated by PyMOL):