Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2423:250
Extra
PDB:
ATOM 1 O3' G A 422 -40.686 59.475 51.303 1.00 80.32 O
ATOM 2 P C A 423 -42.019 59.404 50.423 1.00 64.83 P
ATOM 3 OP1 C A 423 -41.713 58.761 49.146 1.00 65.10 O
ATOM 4 OP2 C A 423 -42.533 60.741 50.400 1.00 65.43 O
ATOM 5 O5' C A 423 -42.953 58.469 51.254 1.00 64.49 O
ATOM 6 C5' C A 423 -43.363 57.233 50.718 1.00 64.48 C
ATOM 7 C4' C A 423 -44.780 57.293 50.204 1.00 65.19 C
ATOM 8 O4' C A 423 -44.859 58.135 49.016 1.00 65.99 O
ATOM 9 C3' C A 423 -45.361 55.960 49.770 1.00 65.20 C
ATOM 10 O3' C A 423 -45.894 55.254 50.853 1.00 64.73 O
ATOM 11 C2' C A 423 -46.396 56.346 48.718 1.00 66.15 C
ATOM 12 O2' C A 423 -47.610 56.775 49.317 1.00 66.44 O
ATOM 13 C1' C A 423 -45.721 57.546 48.057 1.00 66.56 C
ATOM 14 N1 C A 423 -44.913 57.129 46.874 1.00 66.71 N
ATOM 15 C2 C A 423 -45.614 56.763 45.714 1.00 67.42 C
ATOM 16 O2 C A 423 -46.882 56.816 45.699 1.00 67.91 O
ATOM 17 N3 C A 423 -44.904 56.361 44.630 1.00 67.61 N
ATOM 18 C4 C A 423 -43.583 56.300 44.656 1.00 67.13 C
ATOM 19 N4 C A 423 -42.979 55.890 43.533 1.00 67.40 N
ATOM 20 C5 C A 423 -42.850 56.659 45.830 1.00 66.40 C
ATOM 21 C6 C A 423 -43.541 57.061 46.899 1.00 66.22 C
ATOM 22 P A A 424 -45.797 53.667 50.921 1.00 60.99 P
ATOM 23 OP1 A A 424 -44.608 53.337 51.754 1.00 60.15 O
ATOM 24 OP2 A A 424 -45.870 53.142 49.534 1.00 61.49 O
ATOM 25 O5' A A 424 -47.127 53.327 51.699 1.00 61.04 O
TER
ATOM 1 O3' C B 49 -37.974 55.572 44.005 1.00 67.91 O
ATOM 2 P A B 50 -38.560 56.824 43.156 1.00 79.39 P
ATOM 3 OP1 A B 50 -37.503 57.876 43.146 1.00 79.41 O
ATOM 4 OP2 A B 50 -39.908 57.158 43.724 1.00 79.56 O
ATOM 5 O5' A B 50 -38.720 56.220 41.684 1.00 80.05 O
ATOM 6 C5' A B 50 -37.589 55.740 40.976 1.00 80.00 C
ATOM 7 C4' A B 50 -37.808 55.744 39.484 1.00 80.89 C
ATOM 8 O4' A B 50 -38.623 54.612 39.093 1.00 81.04 O
ATOM 9 C3' A B 50 -38.524 56.955 38.903 1.00 81.76 C
ATOM 10 O3' A B 50 -37.650 58.055 38.706 1.00 81.95 O
ATOM 11 C2' A B 50 -39.093 56.402 37.604 1.00 82.53 C
ATOM 12 O2' A B 50 -38.096 56.365 36.603 1.00 82.84 O
ATOM 13 C1' A B 50 -39.433 54.961 37.998 1.00 82.00 C
ATOM 14 N9 A B 50 -40.833 54.832 38.408 1.00 82.14 N
ATOM 15 C8 A B 50 -41.342 54.449 39.625 1.00 81.49 C
ATOM 16 N7 A B 50 -42.648 54.461 39.666 1.00 81.89 N
ATOM 17 C5 A B 50 -43.011 54.894 38.390 1.00 82.87 C
ATOM 18 C6 A B 50 -44.260 55.135 37.774 1.00 83.73 C
ATOM 19 N6 A B 50 -45.433 54.957 38.391 1.00 83.73 N
ATOM 20 N1 A B 50 -44.258 55.576 36.489 1.00 84.63 N
ATOM 21 C2 A B 50 -43.081 55.750 35.867 1.00 84.66 C
ATOM 22 N3 A B 50 -41.846 55.557 36.321 1.00 83.92 N
ATOM 23 C4 A B 50 -41.891 55.130 37.603 1.00 83.03 C
ATOM 24 P U B 51 -38.157 59.567 38.921 1.00 84.36 P
ATOM 25 OP1 U B 51 -37.100 60.463 38.391 1.00 84.67 O
ATOM 26 OP2 U B 51 -38.553 59.707 40.352 1.00 83.70 O
ATOM 27 O5' U B 51 -39.442 59.636 37.995 1.00 85.29 O
TER
ATOM 2 P C A 423 -42.019 59.404 50.423 1.00 64.83 P
ATOM 3 OP1 C A 423 -41.713 58.761 49.146 1.00 65.10 O
ATOM 4 OP2 C A 423 -42.533 60.741 50.400 1.00 65.43 O
ATOM 5 O5' C A 423 -42.953 58.469 51.254 1.00 64.49 O
ATOM 6 C5' C A 423 -43.363 57.233 50.718 1.00 64.48 C
ATOM 7 C4' C A 423 -44.780 57.293 50.204 1.00 65.19 C
ATOM 8 O4' C A 423 -44.859 58.135 49.016 1.00 65.99 O
ATOM 9 C3' C A 423 -45.361 55.960 49.770 1.00 65.20 C
ATOM 10 O3' C A 423 -45.894 55.254 50.853 1.00 64.73 O
ATOM 11 C2' C A 423 -46.396 56.346 48.718 1.00 66.15 C
ATOM 12 O2' C A 423 -47.610 56.775 49.317 1.00 66.44 O
ATOM 13 C1' C A 423 -45.721 57.546 48.057 1.00 66.56 C
ATOM 14 N1 C A 423 -44.913 57.129 46.874 1.00 66.71 N
ATOM 15 C2 C A 423 -45.614 56.763 45.714 1.00 67.42 C
ATOM 16 O2 C A 423 -46.882 56.816 45.699 1.00 67.91 O
ATOM 17 N3 C A 423 -44.904 56.361 44.630 1.00 67.61 N
ATOM 18 C4 C A 423 -43.583 56.300 44.656 1.00 67.13 C
ATOM 19 N4 C A 423 -42.979 55.890 43.533 1.00 67.40 N
ATOM 20 C5 C A 423 -42.850 56.659 45.830 1.00 66.40 C
ATOM 21 C6 C A 423 -43.541 57.061 46.899 1.00 66.22 C
ATOM 22 P A A 424 -45.797 53.667 50.921 1.00 60.99 P
ATOM 23 OP1 A A 424 -44.608 53.337 51.754 1.00 60.15 O
ATOM 24 OP2 A A 424 -45.870 53.142 49.534 1.00 61.49 O
ATOM 25 O5' A A 424 -47.127 53.327 51.699 1.00 61.04 O
TER
ATOM 1 O3' C B 49 -37.974 55.572 44.005 1.00 67.91 O
ATOM 2 P A B 50 -38.560 56.824 43.156 1.00 79.39 P
ATOM 3 OP1 A B 50 -37.503 57.876 43.146 1.00 79.41 O
ATOM 4 OP2 A B 50 -39.908 57.158 43.724 1.00 79.56 O
ATOM 5 O5' A B 50 -38.720 56.220 41.684 1.00 80.05 O
ATOM 6 C5' A B 50 -37.589 55.740 40.976 1.00 80.00 C
ATOM 7 C4' A B 50 -37.808 55.744 39.484 1.00 80.89 C
ATOM 8 O4' A B 50 -38.623 54.612 39.093 1.00 81.04 O
ATOM 9 C3' A B 50 -38.524 56.955 38.903 1.00 81.76 C
ATOM 10 O3' A B 50 -37.650 58.055 38.706 1.00 81.95 O
ATOM 11 C2' A B 50 -39.093 56.402 37.604 1.00 82.53 C
ATOM 12 O2' A B 50 -38.096 56.365 36.603 1.00 82.84 O
ATOM 13 C1' A B 50 -39.433 54.961 37.998 1.00 82.00 C
ATOM 14 N9 A B 50 -40.833 54.832 38.408 1.00 82.14 N
ATOM 15 C8 A B 50 -41.342 54.449 39.625 1.00 81.49 C
ATOM 16 N7 A B 50 -42.648 54.461 39.666 1.00 81.89 N
ATOM 17 C5 A B 50 -43.011 54.894 38.390 1.00 82.87 C
ATOM 18 C6 A B 50 -44.260 55.135 37.774 1.00 83.73 C
ATOM 19 N6 A B 50 -45.433 54.957 38.391 1.00 83.73 N
ATOM 20 N1 A B 50 -44.258 55.576 36.489 1.00 84.63 N
ATOM 21 C2 A B 50 -43.081 55.750 35.867 1.00 84.66 C
ATOM 22 N3 A B 50 -41.846 55.557 36.321 1.00 83.92 N
ATOM 23 C4 A B 50 -41.891 55.130 37.603 1.00 83.03 C
ATOM 24 P U B 51 -38.157 59.567 38.921 1.00 84.36 P
ATOM 25 OP1 U B 51 -37.100 60.463 38.391 1.00 84.67 O
ATOM 26 OP2 U B 51 -38.553 59.707 40.352 1.00 83.70 O
ATOM 27 O5' U B 51 -39.442 59.636 37.995 1.00 85.29 O
TER
Atoms:
C2: (-45.614,56.763,45.714)
OP1: (-41.713,58.761,49.146)
OP2: (-42.533,60.741,50.400)
C4: (-43.583,56.300,44.656)
O5': (-42.953,58.469,51.254)
C3': (-45.361,55.960,49.770)
C1': (-45.721,57.546,48.057)
O4': (-44.859,58.135,49.016)
C5': (-43.363,57.233,50.718)
P: (-42.019,59.404,50.423)
O2: (-46.882,56.816,45.699)
C4': (-44.780,57.293,50.204)
C2': (-46.396,56.346,48.718)
O2': (-47.610,56.775,49.317)
N1: (-44.913,57.129,46.874)
N3: (-44.904,56.361,44.630)
N4: (-42.979,55.890,43.533)
C6: (-43.541,57.061,46.899)
C5: (-42.850,56.659,45.830)
O3': (-45.894,55.254,50.853)
OP1: (-41.713,58.761,49.146)
OP2: (-42.533,60.741,50.400)
C4: (-43.583,56.300,44.656)
O5': (-42.953,58.469,51.254)
C3': (-45.361,55.960,49.770)
C1': (-45.721,57.546,48.057)
O4': (-44.859,58.135,49.016)
C5': (-43.363,57.233,50.718)
P: (-42.019,59.404,50.423)
O2: (-46.882,56.816,45.699)
C4': (-44.780,57.293,50.204)
C2': (-46.396,56.346,48.718)
O2': (-47.610,56.775,49.317)
N1: (-44.913,57.129,46.874)
N3: (-44.904,56.361,44.630)
N4: (-42.979,55.890,43.533)
C6: (-43.541,57.061,46.899)
C5: (-42.850,56.659,45.830)
O3': (-45.894,55.254,50.853)
OP1: (-37.503,57.876,43.146)
OP2: (-39.908,57.158,43.724)
C3': (-38.524,56.955,38.903)
C1': (-39.433,54.961,37.998)
C5': (-37.589,55.740,40.976)
O4': (-38.623,54.612,39.093)
C8: (-41.342,54.449,39.625)
O2': (-38.096,56.365,36.603)
C6: (-44.260,55.135,37.774)
C5: (-43.011,54.894,38.390)
C4: (-41.891,55.130,37.603)
P: (-38.560,56.824,43.156)
C4': (-37.808,55.744,39.484)
C2': (-39.093,56.402,37.604)
C2: (-43.081,55.750,35.867)
N1: (-44.258,55.576,36.489)
N3: (-41.846,55.557,36.321)
N6: (-45.433,54.957,38.391)
N7: (-42.648,54.461,39.666)
N9: (-40.833,54.832,38.408)
O5': (-38.720,56.220,41.684)
O3': (-37.650,58.055,38.706)
OP2: (-39.908,57.158,43.724)
C3': (-38.524,56.955,38.903)
C1': (-39.433,54.961,37.998)
C5': (-37.589,55.740,40.976)
O4': (-38.623,54.612,39.093)
C8: (-41.342,54.449,39.625)
O2': (-38.096,56.365,36.603)
C6: (-44.260,55.135,37.774)
C5: (-43.011,54.894,38.390)
C4: (-41.891,55.130,37.603)
P: (-38.560,56.824,43.156)
C4': (-37.808,55.744,39.484)
C2': (-39.093,56.402,37.604)
C2: (-43.081,55.750,35.867)
N1: (-44.258,55.576,36.489)
N3: (-41.846,55.557,36.321)
N6: (-45.433,54.957,38.391)
N7: (-42.648,54.461,39.666)
N9: (-40.833,54.832,38.408)
O5': (-38.720,56.220,41.684)
O3': (-37.650,58.055,38.706)
Image (generated by PyMOL):