ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0901:01029

Extra

PDB:
ATOM 1 O3' A A 900 46.754 89.017 84.915 1.00 27.42 O
ATOM 2 P A A 901 47.349 88.876 86.394 1.00 26.26 P
ATOM 3 OP1 A A 901 47.922 87.516 86.514 1.00 24.47 O
ATOM 4 OP2 A A 901 46.322 89.333 87.353 1.00 25.10 O
ATOM 5 O5' A A 901 48.505 89.969 86.425 1.00 27.88 O
ATOM 6 C5' A A 901 48.881 90.643 87.641 1.00 26.93 C
ATOM 7 C4' A A 901 49.435 92.014 87.319 1.00 28.26 C
ATOM 8 O4' A A 901 48.349 92.916 86.973 1.00 28.68 O
ATOM 9 C3' A A 901 50.113 92.734 88.469 1.00 27.51 C
ATOM 10 O3' A A 901 51.455 92.277 88.598 1.00 29.03 O
ATOM 11 C2' A A 901 50.075 94.185 88.005 1.00 26.26 C
ATOM 12 O2' A A 901 51.081 94.468 87.055 1.00 24.91 O
ATOM 13 C1' A A 901 48.726 94.244 87.288 1.00 26.09 C
ATOM 14 N9 A A 901 47.649 94.890 88.035 1.00 25.44 N
ATOM 15 C8 A A 901 46.526 94.325 88.579 1.00 26.66 C
ATOM 16 N7 A A 901 45.726 95.186 89.162 1.00 26.94 N
ATOM 17 C5 A A 901 46.370 96.402 88.997 1.00 26.76 C
ATOM 18 C6 A A 901 46.031 97.711 89.375 1.00 27.78 C
ATOM 19 N6 A A 901 44.916 98.029 90.030 1.00 26.68 N
ATOM 20 N1 A A 901 46.890 98.700 89.049 1.00 31.74 N
ATOM 21 C2 A A 901 48.013 98.383 88.389 1.00 30.50 C
ATOM 22 N3 A A 901 48.440 97.193 87.978 1.00 28.64 N
ATOM 23 C4 A A 901 47.561 96.233 88.314 1.00 26.98 C
ATOM 24 P C A 902 51.896 91.426 89.886 1.00 29.76 P
ATOM 25 OP1 C A 902 50.890 91.658 90.960 1.00 29.30 O
ATOM 26 OP2 C A 902 53.327 91.741 90.147 1.00 30.31 O
ATOM 27 O5' C A 902 51.774 89.911 89.395 1.00 27.09 O
TER

ATOM 1 O3' C B1028 37.496 100.129 95.419 1.00 26.68 O
ATOM 2 P A B1029 37.180 100.512 93.898 1.00 26.46 P
ATOM 3 OP1 A B1029 36.636 101.897 93.882 1.00 23.38 O
ATOM 4 OP2 A B1029 36.375 99.414 93.330 1.00 27.71 O
ATOM 5 O5' A B1029 38.613 100.473 93.190 1.00 27.18 O
ATOM 6 C5' A B1029 39.639 101.447 93.504 1.00 26.80 C
ATOM 7 C4' A B1029 40.921 101.110 92.780 1.00 27.39 C
ATOM 8 O4' A B1029 41.389 99.803 93.197 1.00 28.70 O
ATOM 9 C3' A B1029 40.789 101.027 91.270 1.00 28.16 C
ATOM 10 O3' A B1029 40.991 102.322 90.726 1.00 29.15 O
ATOM 11 C2' A B1029 41.890 100.044 90.880 1.00 28.13 C
ATOM 12 O2' A B1029 43.167 100.632 90.795 1.00 27.23 O
ATOM 13 C1' A B1029 41.882 99.086 92.073 1.00 29.78 C
ATOM 14 N9 A B1029 41.042 97.900 91.888 1.00 31.78 N
ATOM 15 C8 A B1029 39.703 97.777 92.163 1.00 33.59 C
ATOM 16 N7 A B1029 39.221 96.589 91.908 1.00 34.16 N
ATOM 17 C5 A B1029 40.314 95.884 91.433 1.00 32.62 C
ATOM 18 C6 A B1029 40.456 94.570 90.989 1.00 34.23 C
ATOM 19 N6 A B1029 39.453 93.690 90.964 1.00 37.58 N
ATOM 20 N1 A B1029 41.674 94.177 90.568 1.00 34.28 N
ATOM 21 C2 A B1029 42.672 95.054 90.606 1.00 33.68 C
ATOM 22 N3 A B1029 42.664 96.317 91.010 1.00 34.27 N
ATOM 23 C4 A B1029 41.438 96.676 91.413 1.00 31.52 C
ATOM 24 P G B1030 40.341 102.716 89.317 1.00 30.42 P
ATOM 25 OP1 G B1030 41.032 101.947 88.252 1.00 28.13 O
ATOM 26 OP2 G B1030 40.286 104.200 89.243 1.00 30.50 O
ATOM 27 O5' G B1030 38.854 102.180 89.439 1.00 33.07 O
TER

Atoms:
OP1: (47.922,87.516,86.514)
OP2: (46.322,89.333,87.353)
C3': (50.113,92.734,88.469)
C1': (48.726,94.244,87.288)
C5': (48.881,90.643,87.641)
O4': (48.349,92.916,86.973)
C8: (46.526,94.325,88.579)
O2': (51.081,94.468,87.055)
C6: (46.031,97.711,89.375)
C5: (46.370,96.402,88.997)
C4: (47.561,96.233,88.314)
P: (47.349,88.876,86.394)
C4': (49.435,92.014,87.319)
C2': (50.075,94.185,88.005)
C2: (48.013,98.383,88.389)
N1: (46.890,98.700,89.049)
N3: (48.440,97.193,87.978)
N6: (44.916,98.029,90.030)
N7: (45.726,95.186,89.162)
N9: (47.649,94.890,88.035)
O5': (48.505,89.969,86.425)
O3': (51.455,92.277,88.598)
OP1: (36.636,101.897,93.882)
OP2: (36.375,99.414,93.330)
C3': (40.789,101.027,91.270)
C1': (41.882,99.086,92.073)
C5': (39.639,101.447,93.504)
O4': (41.389,99.803,93.197)
C8: (39.703,97.777,92.163)
O2': (43.167,100.632,90.795)
C6: (40.456,94.570,90.989)
C5: (40.314,95.884,91.433)
C4: (41.438,96.676,91.413)
P: (37.180,100.512,93.898)
C4': (40.921,101.110,92.780)
C2': (41.890,100.044,90.880)
C2: (42.672,95.054,90.606)
N1: (41.674,94.177,90.568)
N3: (42.664,96.317,91.010)
N6: (39.453,93.690,90.964)
N7: (39.221,96.589,91.908)
N9: (41.042,97.900,91.888)
O5': (38.613,100.473,93.190)
O3': (40.991,102.322,90.726)
Image (generated by PyMOL):
PyMOL image
show in jmol