Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1587:A1224
Extra
PDB:
ATOM 1 O3' G A1586 34.138 -65.117 2.421 1.00 30.91 O
ATOM 2 P C A1587 34.354 -66.552 1.717 1.00 40.23 P
ATOM 3 OP1 C A1587 33.044 -66.990 1.195 1.00 30.97 O
ATOM 4 OP2 C A1587 35.063 -67.427 2.687 1.00 39.65 O
ATOM 5 O5' C A1587 35.321 -66.204 0.515 1.00 36.61 O
ATOM 6 C5' C A1587 34.806 -65.815 -0.736 1.00 30.67 C
ATOM 7 C4' C A1587 35.449 -64.552 -1.212 1.00 29.75 C
ATOM 8 O4' C A1587 35.399 -63.559 -0.180 1.00 34.34 O
ATOM 9 C3' C A1587 36.916 -64.634 -1.565 1.00 29.98 C
ATOM 10 O3' C A1587 37.120 -65.197 -2.858 1.00 31.63 O
ATOM 11 C2' C A1587 37.361 -63.159 -1.452 1.00 36.04 C
ATOM 12 O2' C A1587 37.132 -62.464 -2.663 1.00 43.17 O
ATOM 13 C1' C A1587 36.391 -62.597 -0.426 1.00 32.92 C
ATOM 14 N1 C A1587 37.021 -62.176 0.846 1.00 31.22 N
ATOM 15 C2 C A1587 37.704 -60.965 0.875 1.00 38.86 C
ATOM 16 O2 C A1587 37.854 -60.326 -0.174 1.00 47.71 O
ATOM 17 N3 C A1587 38.225 -60.516 2.025 1.00 40.12 N
ATOM 18 C4 C A1587 38.043 -61.214 3.139 1.00 40.04 C
ATOM 19 N4 C A1587 38.575 -60.741 4.282 1.00 39.83 N
ATOM 20 C5 C A1587 37.313 -62.431 3.140 1.00 36.48 C
ATOM 21 C6 C A1587 36.806 -62.857 1.993 1.00 33.25 C
ATOM 22 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 23 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 24 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 25 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
TER
ATOM 1 O3' A B1223 37.104 -61.180 8.793 1.00 37.26 O
ATOM 2 P A B1224 37.791 -62.595 8.463 1.00 36.11 P
ATOM 3 OP1 A B1224 39.023 -62.687 9.305 1.00 36.85 O
ATOM 4 OP2 A B1224 37.923 -62.697 6.984 1.00 28.29 O
ATOM 5 O5' A B1224 36.714 -63.638 8.983 1.00 30.27 O
ATOM 6 C5' A B1224 36.975 -65.036 8.940 1.00 31.20 C
ATOM 7 C4' A B1224 35.708 -65.843 8.979 1.00 27.25 C
ATOM 8 O4' A B1224 35.149 -65.791 10.321 1.00 28.01 O
ATOM 9 C3' A B1224 34.603 -65.336 8.070 1.00 31.45 C
ATOM 10 O3' A B1224 33.760 -66.428 7.739 1.00 30.57 O
ATOM 11 C2' A B1224 33.868 -64.397 8.997 1.00 26.68 C
ATOM 12 O2' A B1224 32.586 -64.037 8.574 1.00 35.87 O
ATOM 13 C1' A B1224 33.849 -65.245 10.249 1.00 29.79 C
ATOM 14 N9 A B1224 33.570 -64.505 11.476 1.00 26.39 N
ATOM 15 C8 A B1224 34.312 -63.551 12.075 1.00 28.28 C
ATOM 16 N7 A B1224 33.787 -63.077 13.170 1.00 30.83 N
ATOM 17 C5 A B1224 32.611 -63.766 13.284 1.00 31.84 C
ATOM 18 C6 A B1224 31.614 -63.701 14.245 1.00 36.08 C
ATOM 19 N6 A B1224 31.663 -62.867 15.286 1.00 37.78 N
ATOM 20 N1 A B1224 30.575 -64.538 14.080 1.00 40.04 N
ATOM 21 C2 A B1224 30.547 -65.377 13.026 1.00 33.22 C
ATOM 22 N3 A B1224 31.434 -65.528 12.060 1.00 29.44 N
ATOM 23 C4 A B1224 32.453 -64.666 12.254 1.00 33.78 C
ATOM 24 P A B1225 34.388 -67.701 7.006 1.00 27.89 P
ATOM 25 OP1 A B1225 35.635 -67.246 6.387 1.00 33.25 O
ATOM 26 OP2 A B1225 33.316 -68.298 6.126 1.00 30.83 O
ATOM 27 O5' A B1225 34.693 -68.679 8.209 1.00 24.92 O
TER
ATOM 2 P C A1587 34.354 -66.552 1.717 1.00 40.23 P
ATOM 3 OP1 C A1587 33.044 -66.990 1.195 1.00 30.97 O
ATOM 4 OP2 C A1587 35.063 -67.427 2.687 1.00 39.65 O
ATOM 5 O5' C A1587 35.321 -66.204 0.515 1.00 36.61 O
ATOM 6 C5' C A1587 34.806 -65.815 -0.736 1.00 30.67 C
ATOM 7 C4' C A1587 35.449 -64.552 -1.212 1.00 29.75 C
ATOM 8 O4' C A1587 35.399 -63.559 -0.180 1.00 34.34 O
ATOM 9 C3' C A1587 36.916 -64.634 -1.565 1.00 29.98 C
ATOM 10 O3' C A1587 37.120 -65.197 -2.858 1.00 31.63 O
ATOM 11 C2' C A1587 37.361 -63.159 -1.452 1.00 36.04 C
ATOM 12 O2' C A1587 37.132 -62.464 -2.663 1.00 43.17 O
ATOM 13 C1' C A1587 36.391 -62.597 -0.426 1.00 32.92 C
ATOM 14 N1 C A1587 37.021 -62.176 0.846 1.00 31.22 N
ATOM 15 C2 C A1587 37.704 -60.965 0.875 1.00 38.86 C
ATOM 16 O2 C A1587 37.854 -60.326 -0.174 1.00 47.71 O
ATOM 17 N3 C A1587 38.225 -60.516 2.025 1.00 40.12 N
ATOM 18 C4 C A1587 38.043 -61.214 3.139 1.00 40.04 C
ATOM 19 N4 C A1587 38.575 -60.741 4.282 1.00 39.83 N
ATOM 20 C5 C A1587 37.313 -62.431 3.140 1.00 36.48 C
ATOM 21 C6 C A1587 36.806 -62.857 1.993 1.00 33.25 C
ATOM 22 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 23 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 24 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 25 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
TER
ATOM 1 O3' A B1223 37.104 -61.180 8.793 1.00 37.26 O
ATOM 2 P A B1224 37.791 -62.595 8.463 1.00 36.11 P
ATOM 3 OP1 A B1224 39.023 -62.687 9.305 1.00 36.85 O
ATOM 4 OP2 A B1224 37.923 -62.697 6.984 1.00 28.29 O
ATOM 5 O5' A B1224 36.714 -63.638 8.983 1.00 30.27 O
ATOM 6 C5' A B1224 36.975 -65.036 8.940 1.00 31.20 C
ATOM 7 C4' A B1224 35.708 -65.843 8.979 1.00 27.25 C
ATOM 8 O4' A B1224 35.149 -65.791 10.321 1.00 28.01 O
ATOM 9 C3' A B1224 34.603 -65.336 8.070 1.00 31.45 C
ATOM 10 O3' A B1224 33.760 -66.428 7.739 1.00 30.57 O
ATOM 11 C2' A B1224 33.868 -64.397 8.997 1.00 26.68 C
ATOM 12 O2' A B1224 32.586 -64.037 8.574 1.00 35.87 O
ATOM 13 C1' A B1224 33.849 -65.245 10.249 1.00 29.79 C
ATOM 14 N9 A B1224 33.570 -64.505 11.476 1.00 26.39 N
ATOM 15 C8 A B1224 34.312 -63.551 12.075 1.00 28.28 C
ATOM 16 N7 A B1224 33.787 -63.077 13.170 1.00 30.83 N
ATOM 17 C5 A B1224 32.611 -63.766 13.284 1.00 31.84 C
ATOM 18 C6 A B1224 31.614 -63.701 14.245 1.00 36.08 C
ATOM 19 N6 A B1224 31.663 -62.867 15.286 1.00 37.78 N
ATOM 20 N1 A B1224 30.575 -64.538 14.080 1.00 40.04 N
ATOM 21 C2 A B1224 30.547 -65.377 13.026 1.00 33.22 C
ATOM 22 N3 A B1224 31.434 -65.528 12.060 1.00 29.44 N
ATOM 23 C4 A B1224 32.453 -64.666 12.254 1.00 33.78 C
ATOM 24 P A B1225 34.388 -67.701 7.006 1.00 27.89 P
ATOM 25 OP1 A B1225 35.635 -67.246 6.387 1.00 33.25 O
ATOM 26 OP2 A B1225 33.316 -68.298 6.126 1.00 30.83 O
ATOM 27 O5' A B1225 34.693 -68.679 8.209 1.00 24.92 O
TER
Atoms:
C2: (37.704,-60.965,0.875)
OP1: (33.044,-66.990,1.195)
OP2: (35.063,-67.427,2.687)
C4: (38.043,-61.214,3.139)
O5': (35.321,-66.204,0.515)
C3': (36.916,-64.634,-1.565)
C1': (36.391,-62.597,-0.426)
O4': (35.399,-63.559,-0.180)
C5': (34.806,-65.815,-0.736)
P: (34.354,-66.552,1.717)
O2: (37.854,-60.326,-0.174)
C4': (35.449,-64.552,-1.212)
C2': (37.361,-63.159,-1.452)
O2': (37.132,-62.464,-2.663)
N1: (37.021,-62.176,0.846)
N3: (38.225,-60.516,2.025)
N4: (38.575,-60.741,4.282)
C6: (36.806,-62.857,1.993)
C5: (37.313,-62.431,3.140)
O3': (37.120,-65.197,-2.858)
OP1: (33.044,-66.990,1.195)
OP2: (35.063,-67.427,2.687)
C4: (38.043,-61.214,3.139)
O5': (35.321,-66.204,0.515)
C3': (36.916,-64.634,-1.565)
C1': (36.391,-62.597,-0.426)
O4': (35.399,-63.559,-0.180)
C5': (34.806,-65.815,-0.736)
P: (34.354,-66.552,1.717)
O2: (37.854,-60.326,-0.174)
C4': (35.449,-64.552,-1.212)
C2': (37.361,-63.159,-1.452)
O2': (37.132,-62.464,-2.663)
N1: (37.021,-62.176,0.846)
N3: (38.225,-60.516,2.025)
N4: (38.575,-60.741,4.282)
C6: (36.806,-62.857,1.993)
C5: (37.313,-62.431,3.140)
O3': (37.120,-65.197,-2.858)
OP1: (39.023,-62.687,9.305)
OP2: (37.923,-62.697,6.984)
C3': (34.603,-65.336,8.070)
C1': (33.849,-65.245,10.249)
C5': (36.975,-65.036,8.940)
O4': (35.149,-65.791,10.321)
C8: (34.312,-63.551,12.075)
O2': (32.586,-64.037,8.574)
C6: (31.614,-63.701,14.245)
C5: (32.611,-63.766,13.284)
C4: (32.453,-64.666,12.254)
P: (37.791,-62.595,8.463)
C4': (35.708,-65.843,8.979)
C2': (33.868,-64.397,8.997)
C2: (30.547,-65.377,13.026)
N1: (30.575,-64.538,14.080)
N3: (31.434,-65.528,12.060)
N6: (31.663,-62.867,15.286)
N7: (33.787,-63.077,13.170)
N9: (33.570,-64.505,11.476)
O5': (36.714,-63.638,8.983)
O3': (33.760,-66.428,7.739)
OP2: (37.923,-62.697,6.984)
C3': (34.603,-65.336,8.070)
C1': (33.849,-65.245,10.249)
C5': (36.975,-65.036,8.940)
O4': (35.149,-65.791,10.321)
C8: (34.312,-63.551,12.075)
O2': (32.586,-64.037,8.574)
C6: (31.614,-63.701,14.245)
C5: (32.611,-63.766,13.284)
C4: (32.453,-64.666,12.254)
P: (37.791,-62.595,8.463)
C4': (35.708,-65.843,8.979)
C2': (33.868,-64.397,8.997)
C2: (30.547,-65.377,13.026)
N1: (30.575,-64.538,14.080)
N3: (31.434,-65.528,12.060)
N6: (31.663,-62.867,15.286)
N7: (33.787,-63.077,13.170)
N9: (33.570,-64.505,11.476)
O5': (36.714,-63.638,8.983)
O3': (33.760,-66.428,7.739)
Image (generated by PyMOL):