ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A629:A731

Extra

PDB:
ATOM 1 O3' G A 628 121.315 117.965 -53.123 1.00 83.46 O
ATOM 2 P C A 629 122.718 118.108 -53.910 1.00 65.02 P
ATOM 3 OP1 C A 629 122.502 119.014 -55.070 1.00 65.86 O
ATOM 4 OP2 C A 629 123.256 116.738 -54.147 1.00 65.86 O
ATOM 5 O5' C A 629 123.672 118.859 -52.876 1.00 65.02 O
ATOM 6 C5' C A 629 123.277 120.111 -52.312 1.00 65.02 C
ATOM 7 C4' C A 629 124.263 120.559 -51.263 1.00 65.02 C
ATOM 8 O4' C A 629 124.340 119.586 -50.191 1.00 65.02 O
ATOM 9 C3' C A 629 125.701 120.744 -51.704 1.00 65.02 C
ATOM 10 O3' C A 629 125.870 122.016 -52.304 1.00 65.02 O
ATOM 11 C2' C A 629 126.465 120.647 -50.388 1.00 65.02 C
ATOM 12 O2' C A 629 126.470 121.861 -49.672 1.00 65.02 O
ATOM 13 C1' C A 629 125.630 119.631 -49.608 1.00 65.02 C
ATOM 14 N1 C A 629 126.218 118.274 -49.589 1.00 65.86 N
ATOM 15 C2 C A 629 127.292 118.030 -48.723 1.00 65.86 C
ATOM 16 O2 C A 629 127.705 118.957 -48.005 1.00 65.86 O
ATOM 17 N3 C A 629 127.852 116.802 -48.691 1.00 65.86 N
ATOM 18 C4 C A 629 127.386 115.838 -49.482 1.00 65.86 C
ATOM 19 N4 C A 629 127.979 114.646 -49.422 1.00 65.86 N
ATOM 20 C5 C A 629 126.294 116.053 -50.372 1.00 65.86 C
ATOM 21 C6 C A 629 125.743 117.273 -50.392 1.00 65.86 C
ATOM 22 P U A 630 126.848 122.180 -53.569 1.00 67.46 P
ATOM 23 OP1 U A 630 126.496 123.478 -54.206 1.00 59.23 O
ATOM 24 OP2 U A 630 126.868 120.932 -54.386 1.00 59.23 O
ATOM 25 O5' U A 630 128.282 122.357 -52.918 1.00 67.46 O
TER

ATOM 1 O3' G B 730 129.503 112.007 -52.624 1.00 58.22 O
ATOM 2 P A B 731 128.813 111.342 -51.342 1.00 54.03 P
ATOM 3 OP1 A B 731 128.388 109.982 -51.780 1.00 49.00 O
ATOM 4 OP2 A B 731 127.819 112.279 -50.777 1.00 49.00 O
ATOM 5 O5' A B 731 130.022 111.242 -50.301 1.00 54.03 O
ATOM 6 C5' A B 731 131.193 110.454 -50.620 1.00 54.03 C
ATOM 7 C4' A B 731 132.174 110.424 -49.468 1.00 54.03 C
ATOM 8 O4' A B 731 132.891 111.684 -49.379 1.00 54.03 O
ATOM 9 C3' A B 731 131.631 110.113 -48.076 1.00 54.03 C
ATOM 10 O3' A B 731 132.521 109.213 -47.407 1.00 54.03 O
ATOM 11 C2' A B 731 131.669 111.481 -47.386 1.00 54.03 C
ATOM 12 O2' A B 731 131.891 111.431 -45.991 1.00 54.03 O
ATOM 13 C1' A B 731 132.879 112.135 -48.044 1.00 54.03 C
ATOM 14 N9 A B 731 132.836 113.595 -48.045 1.00 49.00 N
ATOM 15 C8 A B 731 132.150 114.413 -48.901 1.00 49.00 C
ATOM 16 N7 A B 731 132.347 115.691 -48.682 1.00 49.00 N
ATOM 17 C5 A B 731 133.208 115.714 -47.601 1.00 49.00 C
ATOM 18 C6 A B 731 133.790 116.766 -46.893 1.00 49.00 C
ATOM 19 N6 A B 731 133.573 118.051 -47.176 1.00 49.00 N
ATOM 20 N1 A B 731 134.611 116.457 -45.866 1.00 49.00 N
ATOM 21 C2 A B 731 134.812 115.166 -45.579 1.00 49.00 C
ATOM 22 N3 A B 731 134.314 114.086 -46.172 1.00 49.00 N
ATOM 23 C4 A B 731 133.512 114.432 -47.190 1.00 49.00 C
ATOM 24 P C B 732 132.310 107.619 -47.543 1.00 59.19 P
ATOM 25 OP1 C B 732 130.848 107.342 -47.635 1.00 44.64 O
ATOM 26 OP2 C B 732 133.121 106.944 -46.494 1.00 44.64 O
ATOM 27 O5' C B 732 132.956 107.272 -48.953 1.00 59.19 O
TER

Atoms:
C2: (127.292,118.030,-48.723)
OP1: (122.502,119.014,-55.070)
OP2: (123.256,116.738,-54.147)
C4: (127.386,115.838,-49.482)
O5': (123.672,118.859,-52.876)
C3': (125.701,120.744,-51.704)
C1': (125.630,119.631,-49.608)
O4': (124.340,119.586,-50.191)
C5': (123.277,120.111,-52.312)
P: (122.718,118.108,-53.910)
O2: (127.705,118.957,-48.005)
C4': (124.263,120.559,-51.263)
C2': (126.465,120.647,-50.388)
O2': (126.470,121.861,-49.672)
N1: (126.218,118.274,-49.589)
N3: (127.852,116.802,-48.691)
N4: (127.979,114.646,-49.422)
C6: (125.743,117.273,-50.392)
C5: (126.294,116.053,-50.372)
O3': (125.870,122.016,-52.304)
OP1: (128.388,109.982,-51.780)
OP2: (127.819,112.279,-50.777)
C3': (131.631,110.113,-48.076)
C1': (132.879,112.135,-48.044)
C5': (131.193,110.454,-50.620)
O4': (132.891,111.684,-49.379)
C8: (132.150,114.413,-48.901)
O2': (131.891,111.431,-45.991)
C6: (133.790,116.766,-46.893)
C5: (133.208,115.714,-47.601)
C4: (133.512,114.432,-47.190)
P: (128.813,111.342,-51.342)
C4': (132.174,110.424,-49.468)
C2': (131.669,111.481,-47.386)
C2: (134.812,115.166,-45.579)
N1: (134.611,116.457,-45.866)
N3: (134.314,114.086,-46.172)
N6: (133.573,118.051,-47.176)
N7: (132.347,115.691,-48.682)
N9: (132.836,113.595,-48.045)
O5': (130.022,111.242,-50.301)
O3': (132.521,109.213,-47.407)
Image (generated by PyMOL):
PyMOL image
show in jmol