ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A49:A343

Extra

PDB:
ATOM 1 O3' A A 48 -15.567 51.091 126.737 1.00 7.37 O
ATOM 2 P C A 49 -14.814 49.691 127.017 1.00 33.89 P
ATOM 3 OP1 C A 49 -14.430 49.663 128.454 1.00 31.87 O
ATOM 4 OP2 C A 49 -13.770 49.507 125.962 1.00 29.99 O
ATOM 5 O5' C A 49 -15.960 48.604 126.843 1.00 50.22 O
ATOM 6 C5' C A 49 -15.646 47.207 126.717 1.00 50.55 C
ATOM 7 C4' C A 49 -16.917 46.397 126.710 1.00 52.18 C
ATOM 8 O4' C A 49 -17.795 46.904 125.678 1.00 52.62 O
ATOM 9 C3' C A 49 -16.767 44.914 126.419 1.00 53.67 C
ATOM 10 O3' C A 49 -16.495 44.217 127.637 1.00 55.04 O
ATOM 11 C2' C A 49 -18.127 44.551 125.826 1.00 54.49 C
ATOM 12 O2' C A 49 -19.102 44.311 126.818 1.00 55.71 O
ATOM 13 C1' C A 49 -18.510 45.837 125.089 1.00 53.89 C
ATOM 14 N1 C A 49 -18.217 45.822 123.641 1.00 34.35 N
ATOM 15 C2 C A 49 -19.154 45.260 122.761 1.00 33.96 C
ATOM 16 O2 C A 49 -20.232 44.837 123.213 1.00 34.96 O
ATOM 17 N3 C A 49 -18.865 45.199 121.445 1.00 34.05 N
ATOM 18 C4 C A 49 -17.709 45.683 120.993 1.00 33.96 C
ATOM 19 N4 C A 49 -17.447 45.567 119.688 1.00 33.20 N
ATOM 20 C5 C A 49 -16.760 46.296 121.858 1.00 33.86 C
ATOM 21 C6 C A 49 -17.048 46.340 123.160 1.00 34.38 C
ATOM 22 P A A 50 -16.289 42.618 127.631 1.00 39.49 P
ATOM 23 OP1 A A 50 -15.511 42.286 128.845 1.00 70.71 O
ATOM 24 OP2 A A 50 -15.775 42.205 126.307 1.00 70.70 O
ATOM 25 O5' A A 50 -17.757 42.033 127.814 1.00 21.79 O
TER

ATOM 1 O3' C B 342 -12.839 46.323 118.333 1.00 34.87 O
ATOM 2 P A B 343 -14.010 47.223 117.705 1.00 18.70 P
ATOM 3 OP1 A B 343 -13.698 48.651 118.009 1.00 49.75 O
ATOM 4 OP2 A B 343 -15.316 46.658 118.129 1.00 51.28 O
ATOM 5 O5' A B 343 -13.826 46.970 116.143 1.00 12.95 O
ATOM 6 C5' A B 343 -13.326 47.992 115.284 1.00 9.84 C
ATOM 7 C4' A B 343 -12.159 47.483 114.492 1.00 7.77 C
ATOM 8 O4' A B 343 -11.593 48.635 113.818 1.00 8.75 O
ATOM 9 C3' A B 343 -11.043 46.902 115.348 1.00 7.77 C
ATOM 10 O3' A B 343 -11.137 45.488 115.344 1.00 7.79 O
ATOM 11 C2' A B 343 -9.779 47.403 114.663 1.00 7.77 C
ATOM 12 O2' A B 343 -9.428 46.582 113.563 1.00 8.49 O
ATOM 13 C1' A B 343 -10.231 48.787 114.189 1.00 7.77 C
ATOM 14 N9 A B 343 -10.175 49.816 115.241 1.00 31.88 N
ATOM 15 C8 A B 343 -11.216 50.209 116.052 1.00 29.30 C
ATOM 16 N7 A B 343 -10.907 51.158 116.890 1.00 31.56 N
ATOM 17 C5 A B 343 -9.574 51.410 116.624 1.00 31.56 C
ATOM 18 C6 A B 343 -8.677 52.314 117.177 1.00 33.13 C
ATOM 19 N6 A B 343 -9.012 53.181 118.141 1.00 33.62 N
ATOM 20 N1 A B 343 -7.411 52.311 116.706 1.00 33.86 N
ATOM 21 C2 A B 343 -7.097 51.455 115.730 1.00 33.92 C
ATOM 22 N3 A B 343 -7.862 50.561 115.118 1.00 32.87 N
ATOM 23 C4 A B 343 -9.105 50.587 115.618 1.00 31.47 C
ATOM 24 P G B 344 -9.904 44.586 115.857 1.00 20.87 P
ATOM 25 OP1 G B 344 -10.480 43.766 116.960 1.00 29.22 O
ATOM 26 OP2 G B 344 -8.659 45.385 116.097 1.00 27.23 O
ATOM 27 O5' G B 344 -9.589 43.624 114.628 1.00 17.73 O
TER

Atoms:
C2: (-19.154,45.260,122.761)
OP1: (-14.430,49.663,128.454)
OP2: (-13.770,49.507,125.962)
C4: (-17.709,45.683,120.993)
O5': (-15.960,48.604,126.843)
C3': (-16.767,44.914,126.419)
C1': (-18.510,45.837,125.089)
O4': (-17.795,46.904,125.678)
C5': (-15.646,47.207,126.717)
P: (-14.814,49.691,127.017)
O2: (-20.232,44.837,123.213)
C4': (-16.917,46.397,126.710)
C2': (-18.127,44.551,125.826)
O2': (-19.102,44.311,126.818)
N1: (-18.217,45.822,123.641)
N3: (-18.865,45.199,121.445)
N4: (-17.447,45.567,119.688)
C6: (-17.048,46.340,123.160)
C5: (-16.760,46.296,121.858)
O3': (-16.495,44.217,127.637)
OP1: (-13.698,48.651,118.009)
OP2: (-15.316,46.658,118.129)
C3': (-11.043,46.902,115.348)
C1': (-10.231,48.787,114.189)
C5': (-13.326,47.992,115.284)
O4': (-11.593,48.635,113.818)
C8: (-11.216,50.209,116.052)
O2': (-9.428,46.582,113.563)
C6: (-8.677,52.314,117.177)
C5: (-9.574,51.410,116.624)
C4: (-9.105,50.587,115.618)
P: (-14.010,47.223,117.705)
C4': (-12.159,47.483,114.492)
C2': (-9.779,47.403,114.663)
C2: (-7.097,51.455,115.730)
N1: (-7.411,52.311,116.706)
N3: (-7.862,50.561,115.118)
N6: (-9.012,53.181,118.141)
N7: (-10.907,51.158,116.890)
N9: (-10.175,49.816,115.241)
O5': (-13.826,46.970,116.143)
O3': (-11.137,45.488,115.344)
Image (generated by PyMOL):
PyMOL image
show in jmol