Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1953:A1928
Extra
PDB:
ATOM 1 O3' A A1952 -37.855 100.927 118.784 1.00 11.23 O
ATOM 2 P C A1953 -38.802 102.095 118.213 1.00 2.42 P
ATOM 3 OP1 C A1953 -38.449 102.289 116.795 1.00 2.42 O
ATOM 4 OP2 C A1953 -38.693 103.249 119.140 1.00 2.42 O
ATOM 5 O5' C A1953 -40.254 101.467 118.321 1.00 2.42 O
ATOM 6 C5' C A1953 -41.231 101.733 117.341 1.00 2.42 C
ATOM 7 C4' C A1953 -42.617 101.515 117.877 1.00 2.42 C
ATOM 8 O4' C A1953 -42.560 101.167 119.274 1.00 2.42 O
ATOM 9 C3' C A1953 -43.521 102.721 117.823 1.00 2.42 C
ATOM 10 O3' C A1953 -44.139 102.857 116.580 1.00 2.42 O
ATOM 11 C2' C A1953 -44.504 102.507 118.963 1.00 2.42 C
ATOM 12 O2' C A1953 -45.621 101.744 118.533 1.00 2.42 O
ATOM 13 C1' C A1953 -43.690 101.679 119.951 1.00 2.42 C
ATOM 14 N1 C A1953 -43.228 102.463 121.119 1.00 2.34 N
ATOM 15 C2 C A1953 -43.961 102.467 122.324 1.00 2.34 C
ATOM 16 O2 C A1953 -45.046 101.850 122.367 1.00 2.34 O
ATOM 17 N3 C A1953 -43.477 103.159 123.405 1.00 2.34 N
ATOM 18 C4 C A1953 -42.308 103.820 123.320 1.00 2.34 C
ATOM 19 N4 C A1953 -41.823 104.485 124.367 1.00 2.34 N
ATOM 20 C5 C A1953 -41.558 103.818 122.116 1.00 2.34 C
ATOM 21 C6 C A1953 -42.039 103.129 121.061 1.00 2.34 C
ATOM 22 P C A1954 -44.019 104.243 115.814 1.00 8.02 P
ATOM 23 OP1 C A1954 -44.677 104.073 114.485 1.00 8.02 O
ATOM 24 OP2 C A1954 -42.600 104.653 115.857 1.00 8.02 O
ATOM 25 O5' C A1954 -44.890 105.193 116.725 1.00 8.02 O
TER
ATOM 1 O3' G B1927 -38.651 108.984 124.861 1.00 6.93 O
ATOM 2 P A B1928 -39.007 107.503 125.285 1.00 0.01 P
ATOM 3 OP1 A B1928 -37.874 107.015 126.111 1.00 0.01 O
ATOM 4 OP2 A B1928 -39.341 106.780 124.053 1.00 0.01 O
ATOM 5 O5' A B1928 -40.319 107.692 126.185 1.00 0.01 O
ATOM 6 C5' A B1928 -40.748 108.982 126.607 1.00 0.01 C
ATOM 7 C4' A B1928 -41.257 108.985 128.043 1.00 0.01 C
ATOM 8 O4' A B1928 -42.678 109.232 128.050 1.00 0.01 O
ATOM 9 C3' A B1928 -41.045 107.710 128.843 1.00 0.01 C
ATOM 10 O3' A B1928 -40.754 108.038 130.188 1.00 0.01 O
ATOM 11 C2' A B1928 -42.394 106.999 128.783 1.00 0.01 C
ATOM 12 O2' A B1928 -42.735 106.280 129.943 1.00 0.01 O
ATOM 13 C1' A B1928 -43.390 108.111 128.530 1.00 0.01 C
ATOM 14 N9 A B1928 -44.309 107.740 127.495 1.00 0.12 N
ATOM 15 C8 A B1928 -43.914 107.512 126.174 1.00 0.12 C
ATOM 16 N7 A B1928 -44.875 107.130 125.384 1.00 0.12 N
ATOM 17 C5 A B1928 -45.939 107.106 126.288 1.00 0.12 C
ATOM 18 C6 A B1928 -47.252 106.803 126.060 1.00 0.12 C
ATOM 19 N6 A B1928 -47.649 106.482 124.847 1.00 0.12 N
ATOM 20 N1 A B1928 -48.097 106.847 127.080 1.00 0.12 N
ATOM 21 C2 A B1928 -47.601 107.212 128.262 1.00 0.12 C
ATOM 22 N3 A B1928 -46.372 107.554 128.675 1.00 0.12 N
ATOM 23 C4 A B1928 -45.607 107.465 127.589 1.00 0.12 C
ATOM 24 P A B1929 -39.271 107.888 130.725 1.00 0.01 P
ATOM 25 OP1 A B1929 -38.925 106.460 130.656 1.00 0.01 O
ATOM 26 OP2 A B1929 -39.217 108.570 132.030 1.00 0.01 O
ATOM 27 O5' A B1929 -38.439 108.693 129.644 1.00 0.01 O
TER
ATOM 2 P C A1953 -38.802 102.095 118.213 1.00 2.42 P
ATOM 3 OP1 C A1953 -38.449 102.289 116.795 1.00 2.42 O
ATOM 4 OP2 C A1953 -38.693 103.249 119.140 1.00 2.42 O
ATOM 5 O5' C A1953 -40.254 101.467 118.321 1.00 2.42 O
ATOM 6 C5' C A1953 -41.231 101.733 117.341 1.00 2.42 C
ATOM 7 C4' C A1953 -42.617 101.515 117.877 1.00 2.42 C
ATOM 8 O4' C A1953 -42.560 101.167 119.274 1.00 2.42 O
ATOM 9 C3' C A1953 -43.521 102.721 117.823 1.00 2.42 C
ATOM 10 O3' C A1953 -44.139 102.857 116.580 1.00 2.42 O
ATOM 11 C2' C A1953 -44.504 102.507 118.963 1.00 2.42 C
ATOM 12 O2' C A1953 -45.621 101.744 118.533 1.00 2.42 O
ATOM 13 C1' C A1953 -43.690 101.679 119.951 1.00 2.42 C
ATOM 14 N1 C A1953 -43.228 102.463 121.119 1.00 2.34 N
ATOM 15 C2 C A1953 -43.961 102.467 122.324 1.00 2.34 C
ATOM 16 O2 C A1953 -45.046 101.850 122.367 1.00 2.34 O
ATOM 17 N3 C A1953 -43.477 103.159 123.405 1.00 2.34 N
ATOM 18 C4 C A1953 -42.308 103.820 123.320 1.00 2.34 C
ATOM 19 N4 C A1953 -41.823 104.485 124.367 1.00 2.34 N
ATOM 20 C5 C A1953 -41.558 103.818 122.116 1.00 2.34 C
ATOM 21 C6 C A1953 -42.039 103.129 121.061 1.00 2.34 C
ATOM 22 P C A1954 -44.019 104.243 115.814 1.00 8.02 P
ATOM 23 OP1 C A1954 -44.677 104.073 114.485 1.00 8.02 O
ATOM 24 OP2 C A1954 -42.600 104.653 115.857 1.00 8.02 O
ATOM 25 O5' C A1954 -44.890 105.193 116.725 1.00 8.02 O
TER
ATOM 1 O3' G B1927 -38.651 108.984 124.861 1.00 6.93 O
ATOM 2 P A B1928 -39.007 107.503 125.285 1.00 0.01 P
ATOM 3 OP1 A B1928 -37.874 107.015 126.111 1.00 0.01 O
ATOM 4 OP2 A B1928 -39.341 106.780 124.053 1.00 0.01 O
ATOM 5 O5' A B1928 -40.319 107.692 126.185 1.00 0.01 O
ATOM 6 C5' A B1928 -40.748 108.982 126.607 1.00 0.01 C
ATOM 7 C4' A B1928 -41.257 108.985 128.043 1.00 0.01 C
ATOM 8 O4' A B1928 -42.678 109.232 128.050 1.00 0.01 O
ATOM 9 C3' A B1928 -41.045 107.710 128.843 1.00 0.01 C
ATOM 10 O3' A B1928 -40.754 108.038 130.188 1.00 0.01 O
ATOM 11 C2' A B1928 -42.394 106.999 128.783 1.00 0.01 C
ATOM 12 O2' A B1928 -42.735 106.280 129.943 1.00 0.01 O
ATOM 13 C1' A B1928 -43.390 108.111 128.530 1.00 0.01 C
ATOM 14 N9 A B1928 -44.309 107.740 127.495 1.00 0.12 N
ATOM 15 C8 A B1928 -43.914 107.512 126.174 1.00 0.12 C
ATOM 16 N7 A B1928 -44.875 107.130 125.384 1.00 0.12 N
ATOM 17 C5 A B1928 -45.939 107.106 126.288 1.00 0.12 C
ATOM 18 C6 A B1928 -47.252 106.803 126.060 1.00 0.12 C
ATOM 19 N6 A B1928 -47.649 106.482 124.847 1.00 0.12 N
ATOM 20 N1 A B1928 -48.097 106.847 127.080 1.00 0.12 N
ATOM 21 C2 A B1928 -47.601 107.212 128.262 1.00 0.12 C
ATOM 22 N3 A B1928 -46.372 107.554 128.675 1.00 0.12 N
ATOM 23 C4 A B1928 -45.607 107.465 127.589 1.00 0.12 C
ATOM 24 P A B1929 -39.271 107.888 130.725 1.00 0.01 P
ATOM 25 OP1 A B1929 -38.925 106.460 130.656 1.00 0.01 O
ATOM 26 OP2 A B1929 -39.217 108.570 132.030 1.00 0.01 O
ATOM 27 O5' A B1929 -38.439 108.693 129.644 1.00 0.01 O
TER
Atoms:
C2: (-43.961,102.467,122.324)
OP1: (-38.449,102.289,116.795)
OP2: (-38.693,103.249,119.140)
C4: (-42.308,103.820,123.320)
O5': (-40.254,101.467,118.321)
C3': (-43.521,102.721,117.823)
C1': (-43.690,101.679,119.951)
O4': (-42.560,101.167,119.274)
C5': (-41.231,101.733,117.341)
P: (-38.802,102.095,118.213)
O2: (-45.046,101.850,122.367)
C4': (-42.617,101.515,117.877)
C2': (-44.504,102.507,118.963)
O2': (-45.621,101.744,118.533)
N1: (-43.228,102.463,121.119)
N3: (-43.477,103.159,123.405)
N4: (-41.823,104.485,124.367)
C6: (-42.039,103.129,121.061)
C5: (-41.558,103.818,122.116)
O3': (-44.139,102.857,116.580)
OP1: (-38.449,102.289,116.795)
OP2: (-38.693,103.249,119.140)
C4: (-42.308,103.820,123.320)
O5': (-40.254,101.467,118.321)
C3': (-43.521,102.721,117.823)
C1': (-43.690,101.679,119.951)
O4': (-42.560,101.167,119.274)
C5': (-41.231,101.733,117.341)
P: (-38.802,102.095,118.213)
O2: (-45.046,101.850,122.367)
C4': (-42.617,101.515,117.877)
C2': (-44.504,102.507,118.963)
O2': (-45.621,101.744,118.533)
N1: (-43.228,102.463,121.119)
N3: (-43.477,103.159,123.405)
N4: (-41.823,104.485,124.367)
C6: (-42.039,103.129,121.061)
C5: (-41.558,103.818,122.116)
O3': (-44.139,102.857,116.580)
OP1: (-37.874,107.015,126.111)
OP2: (-39.341,106.780,124.053)
C3': (-41.045,107.710,128.843)
C1': (-43.390,108.111,128.530)
C5': (-40.748,108.982,126.607)
O4': (-42.678,109.232,128.050)
C8: (-43.914,107.512,126.174)
O2': (-42.735,106.280,129.943)
C6: (-47.252,106.803,126.060)
C5: (-45.939,107.106,126.288)
C4: (-45.607,107.465,127.589)
P: (-39.007,107.503,125.285)
C4': (-41.257,108.985,128.043)
C2': (-42.394,106.999,128.783)
C2: (-47.601,107.212,128.262)
N1: (-48.097,106.847,127.080)
N3: (-46.372,107.554,128.675)
N6: (-47.649,106.482,124.847)
N7: (-44.875,107.130,125.384)
N9: (-44.309,107.740,127.495)
O5': (-40.319,107.692,126.185)
O3': (-40.754,108.038,130.188)
OP2: (-39.341,106.780,124.053)
C3': (-41.045,107.710,128.843)
C1': (-43.390,108.111,128.530)
C5': (-40.748,108.982,126.607)
O4': (-42.678,109.232,128.050)
C8: (-43.914,107.512,126.174)
O2': (-42.735,106.280,129.943)
C6: (-47.252,106.803,126.060)
C5: (-45.939,107.106,126.288)
C4: (-45.607,107.465,127.589)
P: (-39.007,107.503,125.285)
C4': (-41.257,108.985,128.043)
C2': (-42.394,106.999,128.783)
C2: (-47.601,107.212,128.262)
N1: (-48.097,106.847,127.080)
N3: (-46.372,107.554,128.675)
N6: (-47.649,106.482,124.847)
N7: (-44.875,107.130,125.384)
N9: (-44.309,107.740,127.495)
O5': (-40.319,107.692,126.185)
O3': (-40.754,108.038,130.188)
Image (generated by PyMOL):