Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:V12:V8
Extra
PDB:
ATOM 1 O3' U A 11 -63.693 124.743 110.686 1.00 29.46 O
ATOM 2 P C A 12 -63.903 125.991 111.669 1.00 22.25 P
ATOM 3 OP1 C A 12 -62.656 126.124 112.477 1.00 22.25 O
ATOM 4 OP2 C A 12 -65.187 125.794 112.362 1.00 22.25 O
ATOM 5 O5' C A 12 -64.026 127.202 110.665 1.00 22.25 O
ATOM 6 C5' C A 12 -64.903 128.281 110.930 1.00 22.25 C
ATOM 7 C4' C A 12 -65.053 129.136 109.712 1.00 22.25 C
ATOM 8 O4' C A 12 -65.877 128.447 108.749 1.00 22.25 O
ATOM 9 C3' C A 12 -65.754 130.462 109.887 1.00 22.25 C
ATOM 10 O3' C A 12 -64.935 131.464 110.466 1.00 22.25 O
ATOM 11 C2' C A 12 -66.171 130.769 108.462 1.00 22.25 C
ATOM 12 O2' C A 12 -65.058 131.194 107.691 1.00 22.25 O
ATOM 13 C1' C A 12 -66.589 129.385 107.984 1.00 22.25 C
ATOM 14 N1 C A 12 -68.016 129.157 108.183 1.00 22.69 N
ATOM 15 C2 C A 12 -68.882 129.825 107.303 1.00 22.69 C
ATOM 16 O2 C A 12 -68.384 130.558 106.409 1.00 22.69 O
ATOM 17 N3 C A 12 -70.222 129.642 107.456 1.00 22.69 N
ATOM 18 C4 C A 12 -70.673 128.839 108.430 1.00 22.69 C
ATOM 19 N4 C A 12 -72.001 128.688 108.553 1.00 22.69 N
ATOM 20 C5 C A 12 -69.782 128.153 109.325 1.00 22.69 C
ATOM 21 C6 C A 12 -68.464 128.340 109.175 1.00 22.69 C
ATOM 22 P A A 13 -65.598 132.654 111.341 1.00 38.26 P
ATOM 23 OP1 A A 13 -64.482 133.323 112.056 1.00 38.26 O
ATOM 24 OP2 A A 13 -66.701 132.055 112.142 1.00 38.26 O
ATOM 25 O5' A A 13 -66.214 133.636 110.228 1.00 38.26 O
TER
ATOM 1 O3' U B 7 -75.567 126.640 110.903 1.00 28.77 O
ATOM 2 P A B 8 -74.898 125.852 109.659 1.00 42.98 P
ATOM 3 OP1 A B 8 -74.888 124.409 110.018 1.00 42.98 O
ATOM 4 OP2 A B 8 -73.607 126.516 109.355 1.00 42.98 O
ATOM 5 O5' A B 8 -75.921 126.112 108.467 1.00 42.98 O
ATOM 6 C5' A B 8 -77.091 125.311 108.321 1.00 42.98 C
ATOM 7 C4' A B 8 -77.177 124.674 106.953 1.00 42.98 C
ATOM 8 O4' A B 8 -77.012 125.704 105.928 1.00 42.98 O
ATOM 9 C3' A B 8 -76.111 123.606 106.657 1.00 42.98 C
ATOM 10 O3' A B 8 -76.677 122.543 105.891 1.00 42.98 O
ATOM 11 C2' A B 8 -75.120 124.362 105.784 1.00 42.98 C
ATOM 12 O2' A B 8 -74.339 123.550 104.933 1.00 42.98 O
ATOM 13 C1' A B 8 -76.065 125.246 104.992 1.00 42.98 C
ATOM 14 N9 A B 8 -75.412 126.374 104.329 1.00 43.56 N
ATOM 15 C8 A B 8 -74.056 126.602 104.320 1.00 43.56 C
ATOM 16 N7 A B 8 -73.675 127.630 103.606 1.00 43.56 N
ATOM 17 C5 A B 8 -74.867 128.086 103.079 1.00 43.56 C
ATOM 18 C6 A B 8 -75.124 129.157 102.222 1.00 43.56 C
ATOM 19 N6 A B 8 -74.143 129.937 101.767 1.00 43.56 N
ATOM 20 N1 A B 8 -76.412 129.378 101.856 1.00 43.56 N
ATOM 21 C2 A B 8 -77.358 128.551 102.338 1.00 43.56 C
ATOM 22 N3 A B 8 -77.239 127.496 103.157 1.00 43.56 N
ATOM 23 C4 A B 8 -75.948 127.316 103.491 1.00 43.56 C
ATOM 24 P G B 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 25 OP1 G B 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 26 OP2 G B 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 27 O5' G B 9 -76.130 120.451 107.153 1.00 40.73 O
TER
ATOM 2 P C A 12 -63.903 125.991 111.669 1.00 22.25 P
ATOM 3 OP1 C A 12 -62.656 126.124 112.477 1.00 22.25 O
ATOM 4 OP2 C A 12 -65.187 125.794 112.362 1.00 22.25 O
ATOM 5 O5' C A 12 -64.026 127.202 110.665 1.00 22.25 O
ATOM 6 C5' C A 12 -64.903 128.281 110.930 1.00 22.25 C
ATOM 7 C4' C A 12 -65.053 129.136 109.712 1.00 22.25 C
ATOM 8 O4' C A 12 -65.877 128.447 108.749 1.00 22.25 O
ATOM 9 C3' C A 12 -65.754 130.462 109.887 1.00 22.25 C
ATOM 10 O3' C A 12 -64.935 131.464 110.466 1.00 22.25 O
ATOM 11 C2' C A 12 -66.171 130.769 108.462 1.00 22.25 C
ATOM 12 O2' C A 12 -65.058 131.194 107.691 1.00 22.25 O
ATOM 13 C1' C A 12 -66.589 129.385 107.984 1.00 22.25 C
ATOM 14 N1 C A 12 -68.016 129.157 108.183 1.00 22.69 N
ATOM 15 C2 C A 12 -68.882 129.825 107.303 1.00 22.69 C
ATOM 16 O2 C A 12 -68.384 130.558 106.409 1.00 22.69 O
ATOM 17 N3 C A 12 -70.222 129.642 107.456 1.00 22.69 N
ATOM 18 C4 C A 12 -70.673 128.839 108.430 1.00 22.69 C
ATOM 19 N4 C A 12 -72.001 128.688 108.553 1.00 22.69 N
ATOM 20 C5 C A 12 -69.782 128.153 109.325 1.00 22.69 C
ATOM 21 C6 C A 12 -68.464 128.340 109.175 1.00 22.69 C
ATOM 22 P A A 13 -65.598 132.654 111.341 1.00 38.26 P
ATOM 23 OP1 A A 13 -64.482 133.323 112.056 1.00 38.26 O
ATOM 24 OP2 A A 13 -66.701 132.055 112.142 1.00 38.26 O
ATOM 25 O5' A A 13 -66.214 133.636 110.228 1.00 38.26 O
TER
ATOM 1 O3' U B 7 -75.567 126.640 110.903 1.00 28.77 O
ATOM 2 P A B 8 -74.898 125.852 109.659 1.00 42.98 P
ATOM 3 OP1 A B 8 -74.888 124.409 110.018 1.00 42.98 O
ATOM 4 OP2 A B 8 -73.607 126.516 109.355 1.00 42.98 O
ATOM 5 O5' A B 8 -75.921 126.112 108.467 1.00 42.98 O
ATOM 6 C5' A B 8 -77.091 125.311 108.321 1.00 42.98 C
ATOM 7 C4' A B 8 -77.177 124.674 106.953 1.00 42.98 C
ATOM 8 O4' A B 8 -77.012 125.704 105.928 1.00 42.98 O
ATOM 9 C3' A B 8 -76.111 123.606 106.657 1.00 42.98 C
ATOM 10 O3' A B 8 -76.677 122.543 105.891 1.00 42.98 O
ATOM 11 C2' A B 8 -75.120 124.362 105.784 1.00 42.98 C
ATOM 12 O2' A B 8 -74.339 123.550 104.933 1.00 42.98 O
ATOM 13 C1' A B 8 -76.065 125.246 104.992 1.00 42.98 C
ATOM 14 N9 A B 8 -75.412 126.374 104.329 1.00 43.56 N
ATOM 15 C8 A B 8 -74.056 126.602 104.320 1.00 43.56 C
ATOM 16 N7 A B 8 -73.675 127.630 103.606 1.00 43.56 N
ATOM 17 C5 A B 8 -74.867 128.086 103.079 1.00 43.56 C
ATOM 18 C6 A B 8 -75.124 129.157 102.222 1.00 43.56 C
ATOM 19 N6 A B 8 -74.143 129.937 101.767 1.00 43.56 N
ATOM 20 N1 A B 8 -76.412 129.378 101.856 1.00 43.56 N
ATOM 21 C2 A B 8 -77.358 128.551 102.338 1.00 43.56 C
ATOM 22 N3 A B 8 -77.239 127.496 103.157 1.00 43.56 N
ATOM 23 C4 A B 8 -75.948 127.316 103.491 1.00 43.56 C
ATOM 24 P G B 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 25 OP1 G B 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 26 OP2 G B 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 27 O5' G B 9 -76.130 120.451 107.153 1.00 40.73 O
TER
Atoms:
C2: (-68.882,129.825,107.303)
OP1: (-62.656,126.124,112.477)
OP2: (-65.187,125.794,112.362)
C4: (-70.673,128.839,108.430)
O5': (-64.026,127.202,110.665)
C3': (-65.754,130.462,109.887)
C1': (-66.589,129.385,107.984)
O4': (-65.877,128.447,108.749)
C5': (-64.903,128.281,110.930)
P: (-63.903,125.991,111.669)
O2: (-68.384,130.558,106.409)
C4': (-65.053,129.136,109.712)
C2': (-66.171,130.769,108.462)
O2': (-65.058,131.194,107.691)
N1: (-68.016,129.157,108.183)
N3: (-70.222,129.642,107.456)
N4: (-72.001,128.688,108.553)
C6: (-68.464,128.340,109.175)
C5: (-69.782,128.153,109.325)
O3': (-64.935,131.464,110.466)
OP1: (-62.656,126.124,112.477)
OP2: (-65.187,125.794,112.362)
C4: (-70.673,128.839,108.430)
O5': (-64.026,127.202,110.665)
C3': (-65.754,130.462,109.887)
C1': (-66.589,129.385,107.984)
O4': (-65.877,128.447,108.749)
C5': (-64.903,128.281,110.930)
P: (-63.903,125.991,111.669)
O2: (-68.384,130.558,106.409)
C4': (-65.053,129.136,109.712)
C2': (-66.171,130.769,108.462)
O2': (-65.058,131.194,107.691)
N1: (-68.016,129.157,108.183)
N3: (-70.222,129.642,107.456)
N4: (-72.001,128.688,108.553)
C6: (-68.464,128.340,109.175)
C5: (-69.782,128.153,109.325)
O3': (-64.935,131.464,110.466)
OP1: (-74.888,124.409,110.018)
OP2: (-73.607,126.516,109.355)
C3': (-76.111,123.606,106.657)
C1': (-76.065,125.246,104.992)
C5': (-77.091,125.311,108.321)
O4': (-77.012,125.704,105.928)
C8: (-74.056,126.602,104.320)
O2': (-74.339,123.550,104.933)
C6: (-75.124,129.157,102.222)
C5: (-74.867,128.086,103.079)
C4: (-75.948,127.316,103.491)
P: (-74.898,125.852,109.659)
C4': (-77.177,124.674,106.953)
C2': (-75.120,124.362,105.784)
C2: (-77.358,128.551,102.338)
N1: (-76.412,129.378,101.856)
N3: (-77.239,127.496,103.157)
N6: (-74.143,129.937,101.767)
N7: (-73.675,127.630,103.606)
N9: (-75.412,126.374,104.329)
O5': (-75.921,126.112,108.467)
O3': (-76.677,122.543,105.891)
OP2: (-73.607,126.516,109.355)
C3': (-76.111,123.606,106.657)
C1': (-76.065,125.246,104.992)
C5': (-77.091,125.311,108.321)
O4': (-77.012,125.704,105.928)
C8: (-74.056,126.602,104.320)
O2': (-74.339,123.550,104.933)
C6: (-75.124,129.157,102.222)
C5: (-74.867,128.086,103.079)
C4: (-75.948,127.316,103.491)
P: (-74.898,125.852,109.659)
C4': (-77.177,124.674,106.953)
C2': (-75.120,124.362,105.784)
C2: (-77.358,128.551,102.338)
N1: (-76.412,129.378,101.856)
N3: (-77.239,127.496,103.157)
N6: (-74.143,129.937,101.767)
N7: (-73.675,127.630,103.606)
N9: (-75.412,126.374,104.329)
O5': (-75.921,126.112,108.467)
O3': (-76.677,122.543,105.891)
Image (generated by PyMOL):