Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2111:A2130
Extra
PDB:
ATOM 1 O3' C A2110 60.837 8.592 -63.259 1.00 84.00 O
ATOM 2 P C A2111 59.962 7.278 -62.887 1.00 83.61 P
ATOM 3 OP1 C A2111 58.752 7.666 -62.110 1.00 82.01 O
ATOM 4 OP2 C A2111 60.913 6.284 -62.307 1.00 86.46 O
ATOM 5 O5' C A2111 59.493 6.684 -64.301 1.00 78.14 O
ATOM 6 C5' C A2111 58.798 7.492 -65.264 1.00 76.26 C
ATOM 7 C4' C A2111 58.828 6.856 -66.650 1.00 71.98 C
ATOM 8 O4' C A2111 60.199 6.567 -67.015 1.00 69.72 O
ATOM 9 C3' C A2111 58.102 5.532 -66.857 1.00 74.05 C
ATOM 10 O3' C A2111 56.729 5.745 -67.147 1.00 70.49 O
ATOM 11 C2' C A2111 58.814 4.930 -68.060 1.00 76.12 C
ATOM 12 O2' C A2111 58.331 5.425 -69.291 1.00 78.25 O
ATOM 13 C1' C A2111 60.242 5.428 -67.854 1.00 75.65 C
ATOM 14 N1 C A2111 61.121 4.415 -67.247 1.00 74.84 N
ATOM 15 C2 C A2111 61.395 3.251 -67.964 1.00 72.85 C
ATOM 16 O2 C A2111 60.877 3.093 -69.074 1.00 68.91 O
ATOM 17 N3 C A2111 62.207 2.324 -67.426 1.00 75.10 N
ATOM 18 C4 C A2111 62.726 2.516 -66.215 1.00 76.32 C
ATOM 19 N4 C A2111 63.517 1.566 -65.720 1.00 79.28 N
ATOM 20 C5 C A2111 62.456 3.687 -65.458 1.00 74.09 C
ATOM 21 C6 C A2111 61.661 4.603 -66.008 1.00 76.54 C
ATOM 22 P U A2112 55.614 4.856 -66.411 1.00 79.00 P
ATOM 23 OP1 U A2112 54.329 5.597 -66.534 1.00 80.12 O
ATOM 24 OP2 U A2112 56.135 4.491 -65.065 1.00 77.00 O
ATOM 25 O5' U A2112 55.523 3.552 -67.311 1.00 71.28 O
TER
ATOM 1 O3' G B2129 63.664 -1.308 -60.804 1.00 49.17 O
ATOM 2 P A B2130 64.440 -0.363 -61.840 1.00 60.94 P
ATOM 3 OP1 A B2130 65.533 0.301 -61.076 1.00 60.98 O
ATOM 4 OP2 A B2130 63.488 0.456 -62.622 1.00 65.35 O
ATOM 5 O5' A B2130 65.064 -1.405 -62.865 1.00 54.79 O
ATOM 6 C5' A B2130 65.691 -2.570 -62.354 1.00 59.46 C
ATOM 7 C4' A B2130 65.666 -3.689 -63.360 1.00 62.20 C
ATOM 8 O4' A B2130 64.361 -3.867 -63.912 1.00 59.00 O
ATOM 9 C3' A B2130 66.616 -3.562 -64.535 1.00 61.62 C
ATOM 10 O3' A B2130 67.843 -4.204 -64.135 1.00 65.84 O
ATOM 11 C2' A B2130 65.876 -4.210 -65.714 1.00 60.95 C
ATOM 12 O2' A B2130 66.538 -5.310 -66.326 1.00 60.34 O
ATOM 13 C1' A B2130 64.483 -4.517 -65.143 1.00 59.76 C
ATOM 14 N9 A B2130 63.390 -4.037 -65.973 1.00 64.24 N
ATOM 15 C8 A B2130 62.881 -2.767 -65.990 1.00 68.22 C
ATOM 16 N7 A B2130 61.922 -2.596 -66.862 1.00 71.90 N
ATOM 17 C5 A B2130 61.780 -3.843 -67.453 1.00 66.07 C
ATOM 18 C6 A B2130 60.935 -4.310 -68.470 1.00 67.89 C
ATOM 19 N6 A B2130 60.041 -3.539 -69.085 1.00 73.17 N
ATOM 20 N1 A B2130 61.039 -5.610 -68.835 1.00 65.49 N
ATOM 21 C2 A B2130 61.930 -6.378 -68.200 1.00 60.63 C
ATOM 22 N3 A B2130 62.780 -6.054 -67.223 1.00 56.67 N
ATOM 23 C4 A B2130 62.662 -4.750 -66.899 1.00 61.62 C
ATOM 24 P C B2131 67.842 -5.759 -63.672 1.00 62.07 P
ATOM 25 OP1 C B2131 69.152 -6.329 -64.056 1.00 53.73 O
ATOM 26 OP2 C B2131 66.594 -6.411 -64.130 1.00 60.28 O
ATOM 27 O5' C B2131 67.681 -5.740 -62.081 1.00 54.07 O
TER
ATOM 2 P C A2111 59.962 7.278 -62.887 1.00 83.61 P
ATOM 3 OP1 C A2111 58.752 7.666 -62.110 1.00 82.01 O
ATOM 4 OP2 C A2111 60.913 6.284 -62.307 1.00 86.46 O
ATOM 5 O5' C A2111 59.493 6.684 -64.301 1.00 78.14 O
ATOM 6 C5' C A2111 58.798 7.492 -65.264 1.00 76.26 C
ATOM 7 C4' C A2111 58.828 6.856 -66.650 1.00 71.98 C
ATOM 8 O4' C A2111 60.199 6.567 -67.015 1.00 69.72 O
ATOM 9 C3' C A2111 58.102 5.532 -66.857 1.00 74.05 C
ATOM 10 O3' C A2111 56.729 5.745 -67.147 1.00 70.49 O
ATOM 11 C2' C A2111 58.814 4.930 -68.060 1.00 76.12 C
ATOM 12 O2' C A2111 58.331 5.425 -69.291 1.00 78.25 O
ATOM 13 C1' C A2111 60.242 5.428 -67.854 1.00 75.65 C
ATOM 14 N1 C A2111 61.121 4.415 -67.247 1.00 74.84 N
ATOM 15 C2 C A2111 61.395 3.251 -67.964 1.00 72.85 C
ATOM 16 O2 C A2111 60.877 3.093 -69.074 1.00 68.91 O
ATOM 17 N3 C A2111 62.207 2.324 -67.426 1.00 75.10 N
ATOM 18 C4 C A2111 62.726 2.516 -66.215 1.00 76.32 C
ATOM 19 N4 C A2111 63.517 1.566 -65.720 1.00 79.28 N
ATOM 20 C5 C A2111 62.456 3.687 -65.458 1.00 74.09 C
ATOM 21 C6 C A2111 61.661 4.603 -66.008 1.00 76.54 C
ATOM 22 P U A2112 55.614 4.856 -66.411 1.00 79.00 P
ATOM 23 OP1 U A2112 54.329 5.597 -66.534 1.00 80.12 O
ATOM 24 OP2 U A2112 56.135 4.491 -65.065 1.00 77.00 O
ATOM 25 O5' U A2112 55.523 3.552 -67.311 1.00 71.28 O
TER
ATOM 1 O3' G B2129 63.664 -1.308 -60.804 1.00 49.17 O
ATOM 2 P A B2130 64.440 -0.363 -61.840 1.00 60.94 P
ATOM 3 OP1 A B2130 65.533 0.301 -61.076 1.00 60.98 O
ATOM 4 OP2 A B2130 63.488 0.456 -62.622 1.00 65.35 O
ATOM 5 O5' A B2130 65.064 -1.405 -62.865 1.00 54.79 O
ATOM 6 C5' A B2130 65.691 -2.570 -62.354 1.00 59.46 C
ATOM 7 C4' A B2130 65.666 -3.689 -63.360 1.00 62.20 C
ATOM 8 O4' A B2130 64.361 -3.867 -63.912 1.00 59.00 O
ATOM 9 C3' A B2130 66.616 -3.562 -64.535 1.00 61.62 C
ATOM 10 O3' A B2130 67.843 -4.204 -64.135 1.00 65.84 O
ATOM 11 C2' A B2130 65.876 -4.210 -65.714 1.00 60.95 C
ATOM 12 O2' A B2130 66.538 -5.310 -66.326 1.00 60.34 O
ATOM 13 C1' A B2130 64.483 -4.517 -65.143 1.00 59.76 C
ATOM 14 N9 A B2130 63.390 -4.037 -65.973 1.00 64.24 N
ATOM 15 C8 A B2130 62.881 -2.767 -65.990 1.00 68.22 C
ATOM 16 N7 A B2130 61.922 -2.596 -66.862 1.00 71.90 N
ATOM 17 C5 A B2130 61.780 -3.843 -67.453 1.00 66.07 C
ATOM 18 C6 A B2130 60.935 -4.310 -68.470 1.00 67.89 C
ATOM 19 N6 A B2130 60.041 -3.539 -69.085 1.00 73.17 N
ATOM 20 N1 A B2130 61.039 -5.610 -68.835 1.00 65.49 N
ATOM 21 C2 A B2130 61.930 -6.378 -68.200 1.00 60.63 C
ATOM 22 N3 A B2130 62.780 -6.054 -67.223 1.00 56.67 N
ATOM 23 C4 A B2130 62.662 -4.750 -66.899 1.00 61.62 C
ATOM 24 P C B2131 67.842 -5.759 -63.672 1.00 62.07 P
ATOM 25 OP1 C B2131 69.152 -6.329 -64.056 1.00 53.73 O
ATOM 26 OP2 C B2131 66.594 -6.411 -64.130 1.00 60.28 O
ATOM 27 O5' C B2131 67.681 -5.740 -62.081 1.00 54.07 O
TER
Atoms:
C2: (61.395,3.251,-67.964)
OP1: (58.752,7.666,-62.110)
OP2: (60.913,6.284,-62.307)
C4: (62.726,2.516,-66.215)
O5': (59.493,6.684,-64.301)
C3': (58.102,5.532,-66.857)
C1': (60.242,5.428,-67.854)
O4': (60.199,6.567,-67.015)
C5': (58.798,7.492,-65.264)
P: (59.962,7.278,-62.887)
O2: (60.877,3.093,-69.074)
C4': (58.828,6.856,-66.650)
C2': (58.814,4.930,-68.060)
O2': (58.331,5.425,-69.291)
N1: (61.121,4.415,-67.247)
N3: (62.207,2.324,-67.426)
N4: (63.517,1.566,-65.720)
C6: (61.661,4.603,-66.008)
C5: (62.456,3.687,-65.458)
O3': (56.729,5.745,-67.147)
OP1: (58.752,7.666,-62.110)
OP2: (60.913,6.284,-62.307)
C4: (62.726,2.516,-66.215)
O5': (59.493,6.684,-64.301)
C3': (58.102,5.532,-66.857)
C1': (60.242,5.428,-67.854)
O4': (60.199,6.567,-67.015)
C5': (58.798,7.492,-65.264)
P: (59.962,7.278,-62.887)
O2: (60.877,3.093,-69.074)
C4': (58.828,6.856,-66.650)
C2': (58.814,4.930,-68.060)
O2': (58.331,5.425,-69.291)
N1: (61.121,4.415,-67.247)
N3: (62.207,2.324,-67.426)
N4: (63.517,1.566,-65.720)
C6: (61.661,4.603,-66.008)
C5: (62.456,3.687,-65.458)
O3': (56.729,5.745,-67.147)
OP1: (65.533,0.301,-61.076)
OP2: (63.488,0.456,-62.622)
C3': (66.616,-3.562,-64.535)
C1': (64.483,-4.517,-65.143)
C5': (65.691,-2.570,-62.354)
O4': (64.361,-3.867,-63.912)
C8: (62.881,-2.767,-65.990)
O2': (66.538,-5.310,-66.326)
C6: (60.935,-4.310,-68.470)
C5: (61.780,-3.843,-67.453)
C4: (62.662,-4.750,-66.899)
P: (64.440,-0.363,-61.840)
C4': (65.666,-3.689,-63.360)
C2': (65.876,-4.210,-65.714)
C2: (61.930,-6.378,-68.200)
N1: (61.039,-5.610,-68.835)
N3: (62.780,-6.054,-67.223)
N6: (60.041,-3.539,-69.085)
N7: (61.922,-2.596,-66.862)
N9: (63.390,-4.037,-65.973)
O5': (65.064,-1.405,-62.865)
O3': (67.843,-4.204,-64.135)
OP2: (63.488,0.456,-62.622)
C3': (66.616,-3.562,-64.535)
C1': (64.483,-4.517,-65.143)
C5': (65.691,-2.570,-62.354)
O4': (64.361,-3.867,-63.912)
C8: (62.881,-2.767,-65.990)
O2': (66.538,-5.310,-66.326)
C6: (60.935,-4.310,-68.470)
C5: (61.780,-3.843,-67.453)
C4: (62.662,-4.750,-66.899)
P: (64.440,-0.363,-61.840)
C4': (65.666,-3.689,-63.360)
C2': (65.876,-4.210,-65.714)
C2: (61.930,-6.378,-68.200)
N1: (61.039,-5.610,-68.835)
N3: (62.780,-6.054,-67.223)
N6: (60.041,-3.539,-69.085)
N7: (61.922,-2.596,-66.862)
N9: (63.390,-4.037,-65.973)
O5': (65.064,-1.405,-62.865)
O3': (67.843,-4.204,-64.135)
Image (generated by PyMOL):