ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01952:01927

Extra

PDB:
ATOM 1 O3' G A1951 103.454 111.418 107.375 1.00 77.08 O
ATOM 2 P C A1952 101.937 111.117 107.833 1.00 75.70 P
ATOM 3 OP1 C A1952 101.073 112.037 107.050 1.00 74.61 O
ATOM 4 OP2 C A1952 101.881 111.152 109.322 1.00 75.24 O
ATOM 5 O5' C A1952 101.634 109.630 107.330 1.00 76.00 O
ATOM 6 C5' C A1952 101.577 108.518 108.255 1.00 73.73 C
ATOM 7 C4' C A1952 100.338 107.672 108.010 1.00 72.28 C
ATOM 8 O4' C A1952 99.141 108.430 108.330 1.00 71.95 O
ATOM 9 C3' C A1952 100.081 107.189 106.592 1.00 72.49 C
ATOM 10 O3' C A1952 100.869 106.050 106.268 1.00 74.29 O
ATOM 11 C2' C A1952 98.591 106.857 106.627 1.00 71.10 C
ATOM 12 O2' C A1952 98.301 105.613 107.229 1.00 71.10 O
ATOM 13 C1' C A1952 98.057 107.965 107.534 1.00 69.17 C
ATOM 14 N1 C A1952 97.455 109.107 106.811 1.00 67.15 N
ATOM 15 C2 C A1952 96.058 109.158 106.685 1.00 66.64 C
ATOM 16 O2 C A1952 95.371 108.235 107.162 1.00 68.08 O
ATOM 17 N3 C A1952 95.491 110.208 106.047 1.00 64.62 N
ATOM 18 C4 C A1952 96.256 111.178 105.546 1.00 62.32 C
ATOM 19 N4 C A1952 95.645 112.198 104.945 1.00 60.99 N
ATOM 20 C5 C A1952 97.677 111.145 105.645 1.00 62.36 C
ATOM 21 C6 C A1952 98.230 110.102 106.278 1.00 64.13 C
ATOM 22 P A A1953 101.362 105.828 104.753 1.00 75.30 P
ATOM 23 OP1 A A1953 100.169 105.612 103.889 1.00 74.67 O
ATOM 24 OP2 A A1953 102.439 104.801 104.793 1.00 75.39 O
ATOM 25 O5' A A1953 102.022 107.224 104.364 1.00 74.26 O
TER

ATOM 1 O3' U B1926 98.095 116.278 103.242 1.00 69.89 O
ATOM 2 P A B1927 96.868 115.529 103.958 1.00 72.44 P
ATOM 3 OP1 A B1927 96.912 114.099 103.557 1.00 73.32 O
ATOM 4 OP2 A B1927 95.625 116.318 103.742 1.00 70.10 O
ATOM 5 O5' A B1927 97.218 115.623 105.504 1.00 73.27 O
ATOM 6 C5' A B1927 98.301 114.876 106.077 1.00 72.69 C
ATOM 7 C4' A B1927 97.905 114.401 107.452 1.00 73.83 C
ATOM 8 O4' A B1927 99.092 113.908 108.135 1.00 72.24 O
ATOM 9 C3' A B1927 97.321 115.497 108.345 1.00 74.18 C
ATOM 10 O3' A B1927 96.323 114.948 109.210 1.00 76.28 O
ATOM 11 C2' A B1927 98.546 115.978 109.113 1.00 73.05 C
ATOM 12 O2' A B1927 98.239 116.588 110.346 1.00 72.84 O
ATOM 13 C1' A B1927 99.320 114.673 109.302 1.00 72.82 C
ATOM 14 N9 A B1927 100.764 114.874 109.451 1.00 72.63 N
ATOM 15 C8 A B1927 101.615 115.564 108.619 1.00 72.48 C
ATOM 16 N7 A B1927 102.854 115.602 109.045 1.00 72.34 N
ATOM 17 C5 A B1927 102.822 114.881 110.231 1.00 72.14 C
ATOM 18 C6 A B1927 103.819 114.558 111.172 1.00 72.04 C
ATOM 19 N6 A B1927 105.094 114.951 111.073 1.00 71.91 N
ATOM 20 N1 A B1927 103.455 113.813 112.238 1.00 71.78 N
ATOM 21 C2 A B1927 102.176 113.432 112.350 1.00 70.77 C
ATOM 22 N3 A B1927 101.151 113.680 111.543 1.00 71.59 N
ATOM 23 C4 A B1927 101.544 114.417 110.488 1.00 72.25 C
ATOM 24 P C B1928 94.851 115.613 109.276 1.00 78.09 P
ATOM 25 OP1 C B1928 94.452 116.095 107.919 1.00 77.65 O
ATOM 26 OP2 C B1928 94.831 116.558 110.425 1.00 77.32 O
ATOM 27 O5' C B1928 93.913 114.383 109.660 1.00 75.51 O
TER

Atoms:
C2: (96.058,109.158,106.685)
OP1: (101.073,112.037,107.050)
OP2: (101.881,111.152,109.322)
C4: (96.256,111.178,105.546)
O5': (101.634,109.630,107.330)
C3': (100.081,107.189,106.592)
C1': (98.057,107.965,107.534)
O4': (99.141,108.430,108.330)
C5': (101.577,108.518,108.255)
P: (101.937,111.117,107.833)
O2: (95.371,108.235,107.162)
C4': (100.338,107.672,108.010)
C2': (98.591,106.857,106.627)
O2': (98.301,105.613,107.229)
N1: (97.455,109.107,106.811)
N3: (95.491,110.208,106.047)
N4: (95.645,112.198,104.945)
C6: (98.230,110.102,106.278)
C5: (97.677,111.145,105.645)
O3': (100.869,106.050,106.268)
OP1: (96.912,114.099,103.557)
OP2: (95.625,116.318,103.742)
C3': (97.321,115.497,108.345)
C1': (99.320,114.673,109.302)
C5': (98.301,114.876,106.077)
O4': (99.092,113.908,108.135)
C8: (101.615,115.564,108.619)
O2': (98.239,116.588,110.346)
C6: (103.819,114.558,111.172)
C5: (102.822,114.881,110.231)
C4: (101.544,114.417,110.488)
P: (96.868,115.529,103.958)
C4': (97.905,114.401,107.452)
C2': (98.546,115.978,109.113)
C2: (102.176,113.432,112.350)
N1: (103.455,113.813,112.238)
N3: (101.151,113.680,111.543)
N6: (105.094,114.951,111.073)
N7: (102.854,115.602,109.045)
N9: (100.764,114.874,109.451)
O5': (97.218,115.623,105.504)
O3': (96.323,114.948,109.210)
Image (generated by PyMOL):
PyMOL image
show in jmol