Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01952:01927
Extra
PDB:
ATOM 1 O3' G A1951 103.340 112.356 107.656 1.00 51.23 O
ATOM 2 P C A1952 101.783 112.194 108.035 1.00 51.78 P
ATOM 3 OP1 C A1952 101.054 113.173 107.195 1.00 49.66 O
ATOM 4 OP2 C A1952 101.643 112.250 109.512 1.00 50.28 O
ATOM 5 O5' C A1952 101.378 110.729 107.540 1.00 53.65 O
ATOM 6 C5' C A1952 101.426 109.591 108.434 1.00 53.37 C
ATOM 7 C4' C A1952 100.194 108.717 108.266 1.00 53.97 C
ATOM 8 O4' C A1952 99.000 109.459 108.634 1.00 54.51 O
ATOM 9 C3' C A1952 99.884 108.205 106.868 1.00 54.80 C
ATOM 10 O3' C A1952 100.651 107.052 106.545 1.00 58.56 O
ATOM 11 C2' C A1952 98.402 107.868 106.970 1.00 53.82 C
ATOM 12 O2' C A1952 98.165 106.625 107.597 1.00 53.01 O
ATOM 13 C1' C A1952 97.894 108.993 107.874 1.00 53.19 C
ATOM 14 N1 C A1952 97.319 110.124 107.120 1.00 54.00 N
ATOM 15 C2 C A1952 95.940 110.134 106.858 1.00 54.10 C
ATOM 16 O2 C A1952 95.237 109.199 107.273 1.00 55.96 O
ATOM 17 N3 C A1952 95.409 111.159 106.156 1.00 54.64 N
ATOM 18 C4 C A1952 96.194 112.149 105.722 1.00 54.82 C
ATOM 19 N4 C A1952 95.627 113.143 105.035 1.00 54.49 N
ATOM 20 C5 C A1952 97.596 112.165 105.975 1.00 54.28 C
ATOM 21 C6 C A1952 98.111 111.146 106.672 1.00 53.61 C
ATOM 22 P A A1953 101.077 106.779 105.016 1.00 61.09 P
ATOM 23 OP1 A A1953 99.861 106.534 104.191 1.00 60.94 O
ATOM 24 OP2 A A1953 102.171 105.769 105.031 1.00 61.94 O
ATOM 25 O5' A A1953 101.707 108.164 104.558 1.00 59.88 O
TER
ATOM 1 O3' U B1926 98.348 117.540 103.479 1.00 50.54 O
ATOM 2 P A B1927 97.170 116.727 104.217 1.00 50.09 P
ATOM 3 OP1 A B1927 97.417 115.289 103.951 1.00 49.23 O
ATOM 4 OP2 A B1927 95.856 117.331 103.857 1.00 48.66 O
ATOM 5 O5' A B1927 97.418 116.975 105.767 1.00 50.37 O
ATOM 6 C5' A B1927 98.522 116.356 106.438 1.00 51.81 C
ATOM 7 C4' A B1927 98.052 115.695 107.709 1.00 52.84 C
ATOM 8 O4' A B1927 99.203 115.112 108.380 1.00 53.61 O
ATOM 9 C3' A B1927 97.403 116.626 108.725 1.00 52.64 C
ATOM 10 O3' A B1927 96.470 115.877 109.493 1.00 53.67 O
ATOM 11 C2' A B1927 98.586 117.037 109.592 1.00 53.11 C
ATOM 12 O2' A B1927 98.195 117.434 110.891 1.00 54.37 O
ATOM 13 C1' A B1927 99.402 115.743 109.627 1.00 53.87 C
ATOM 14 N9 A B1927 100.840 115.963 109.788 1.00 55.75 N
ATOM 15 C8 A B1927 101.695 116.614 108.928 1.00 55.48 C
ATOM 16 N7 A B1927 102.934 116.663 109.350 1.00 55.59 N
ATOM 17 C5 A B1927 102.899 115.996 110.567 1.00 56.36 C
ATOM 18 C6 A B1927 103.895 115.704 111.512 1.00 56.34 C
ATOM 19 N6 A B1927 105.172 116.069 111.380 1.00 55.69 N
ATOM 20 N1 A B1927 103.531 115.015 112.615 1.00 57.46 N
ATOM 21 C2 A B1927 102.246 114.654 112.754 1.00 57.35 C
ATOM 22 N3 A B1927 101.217 114.874 111.939 1.00 57.41 N
ATOM 23 C4 A B1927 101.615 115.556 110.849 1.00 57.03 C
ATOM 24 P C B1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 25 OP1 C B1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 26 OP2 C B1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 27 O5' C B1928 94.198 114.876 109.779 1.00 54.63 O
TER
ATOM 2 P C A1952 101.783 112.194 108.035 1.00 51.78 P
ATOM 3 OP1 C A1952 101.054 113.173 107.195 1.00 49.66 O
ATOM 4 OP2 C A1952 101.643 112.250 109.512 1.00 50.28 O
ATOM 5 O5' C A1952 101.378 110.729 107.540 1.00 53.65 O
ATOM 6 C5' C A1952 101.426 109.591 108.434 1.00 53.37 C
ATOM 7 C4' C A1952 100.194 108.717 108.266 1.00 53.97 C
ATOM 8 O4' C A1952 99.000 109.459 108.634 1.00 54.51 O
ATOM 9 C3' C A1952 99.884 108.205 106.868 1.00 54.80 C
ATOM 10 O3' C A1952 100.651 107.052 106.545 1.00 58.56 O
ATOM 11 C2' C A1952 98.402 107.868 106.970 1.00 53.82 C
ATOM 12 O2' C A1952 98.165 106.625 107.597 1.00 53.01 O
ATOM 13 C1' C A1952 97.894 108.993 107.874 1.00 53.19 C
ATOM 14 N1 C A1952 97.319 110.124 107.120 1.00 54.00 N
ATOM 15 C2 C A1952 95.940 110.134 106.858 1.00 54.10 C
ATOM 16 O2 C A1952 95.237 109.199 107.273 1.00 55.96 O
ATOM 17 N3 C A1952 95.409 111.159 106.156 1.00 54.64 N
ATOM 18 C4 C A1952 96.194 112.149 105.722 1.00 54.82 C
ATOM 19 N4 C A1952 95.627 113.143 105.035 1.00 54.49 N
ATOM 20 C5 C A1952 97.596 112.165 105.975 1.00 54.28 C
ATOM 21 C6 C A1952 98.111 111.146 106.672 1.00 53.61 C
ATOM 22 P A A1953 101.077 106.779 105.016 1.00 61.09 P
ATOM 23 OP1 A A1953 99.861 106.534 104.191 1.00 60.94 O
ATOM 24 OP2 A A1953 102.171 105.769 105.031 1.00 61.94 O
ATOM 25 O5' A A1953 101.707 108.164 104.558 1.00 59.88 O
TER
ATOM 1 O3' U B1926 98.348 117.540 103.479 1.00 50.54 O
ATOM 2 P A B1927 97.170 116.727 104.217 1.00 50.09 P
ATOM 3 OP1 A B1927 97.417 115.289 103.951 1.00 49.23 O
ATOM 4 OP2 A B1927 95.856 117.331 103.857 1.00 48.66 O
ATOM 5 O5' A B1927 97.418 116.975 105.767 1.00 50.37 O
ATOM 6 C5' A B1927 98.522 116.356 106.438 1.00 51.81 C
ATOM 7 C4' A B1927 98.052 115.695 107.709 1.00 52.84 C
ATOM 8 O4' A B1927 99.203 115.112 108.380 1.00 53.61 O
ATOM 9 C3' A B1927 97.403 116.626 108.725 1.00 52.64 C
ATOM 10 O3' A B1927 96.470 115.877 109.493 1.00 53.67 O
ATOM 11 C2' A B1927 98.586 117.037 109.592 1.00 53.11 C
ATOM 12 O2' A B1927 98.195 117.434 110.891 1.00 54.37 O
ATOM 13 C1' A B1927 99.402 115.743 109.627 1.00 53.87 C
ATOM 14 N9 A B1927 100.840 115.963 109.788 1.00 55.75 N
ATOM 15 C8 A B1927 101.695 116.614 108.928 1.00 55.48 C
ATOM 16 N7 A B1927 102.934 116.663 109.350 1.00 55.59 N
ATOM 17 C5 A B1927 102.899 115.996 110.567 1.00 56.36 C
ATOM 18 C6 A B1927 103.895 115.704 111.512 1.00 56.34 C
ATOM 19 N6 A B1927 105.172 116.069 111.380 1.00 55.69 N
ATOM 20 N1 A B1927 103.531 115.015 112.615 1.00 57.46 N
ATOM 21 C2 A B1927 102.246 114.654 112.754 1.00 57.35 C
ATOM 22 N3 A B1927 101.217 114.874 111.939 1.00 57.41 N
ATOM 23 C4 A B1927 101.615 115.556 110.849 1.00 57.03 C
ATOM 24 P C B1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 25 OP1 C B1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 26 OP2 C B1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 27 O5' C B1928 94.198 114.876 109.779 1.00 54.63 O
TER
Atoms:
C2: (95.940,110.134,106.858)
OP1: (101.054,113.173,107.195)
OP2: (101.643,112.250,109.512)
C4: (96.194,112.149,105.722)
O5': (101.378,110.729,107.540)
C3': (99.884,108.205,106.868)
C1': (97.894,108.993,107.874)
O4': (99.000,109.459,108.634)
C5': (101.426,109.591,108.434)
P: (101.783,112.194,108.035)
O2: (95.237,109.199,107.273)
C4': (100.194,108.717,108.266)
C2': (98.402,107.868,106.970)
O2': (98.165,106.625,107.597)
N1: (97.319,110.124,107.120)
N3: (95.409,111.159,106.156)
N4: (95.627,113.143,105.035)
C6: (98.111,111.146,106.672)
C5: (97.596,112.165,105.975)
O3': (100.651,107.052,106.545)
OP1: (101.054,113.173,107.195)
OP2: (101.643,112.250,109.512)
C4: (96.194,112.149,105.722)
O5': (101.378,110.729,107.540)
C3': (99.884,108.205,106.868)
C1': (97.894,108.993,107.874)
O4': (99.000,109.459,108.634)
C5': (101.426,109.591,108.434)
P: (101.783,112.194,108.035)
O2: (95.237,109.199,107.273)
C4': (100.194,108.717,108.266)
C2': (98.402,107.868,106.970)
O2': (98.165,106.625,107.597)
N1: (97.319,110.124,107.120)
N3: (95.409,111.159,106.156)
N4: (95.627,113.143,105.035)
C6: (98.111,111.146,106.672)
C5: (97.596,112.165,105.975)
O3': (100.651,107.052,106.545)
OP1: (97.417,115.289,103.951)
OP2: (95.856,117.331,103.857)
C3': (97.403,116.626,108.725)
C1': (99.402,115.743,109.627)
C5': (98.522,116.356,106.438)
O4': (99.203,115.112,108.380)
C8: (101.695,116.614,108.928)
O2': (98.195,117.434,110.891)
C6: (103.895,115.704,111.512)
C5: (102.899,115.996,110.567)
C4: (101.615,115.556,110.849)
P: (97.170,116.727,104.217)
C4': (98.052,115.695,107.709)
C2': (98.586,117.037,109.592)
C2: (102.246,114.654,112.754)
N1: (103.531,115.015,112.615)
N3: (101.217,114.874,111.939)
N6: (105.172,116.069,111.380)
N7: (102.934,116.663,109.350)
N9: (100.840,115.963,109.788)
O5': (97.418,116.975,105.767)
O3': (96.470,115.877,109.493)
OP2: (95.856,117.331,103.857)
C3': (97.403,116.626,108.725)
C1': (99.402,115.743,109.627)
C5': (98.522,116.356,106.438)
O4': (99.203,115.112,108.380)
C8: (101.695,116.614,108.928)
O2': (98.195,117.434,110.891)
C6: (103.895,115.704,111.512)
C5: (102.899,115.996,110.567)
C4: (101.615,115.556,110.849)
P: (97.170,116.727,104.217)
C4': (98.052,115.695,107.709)
C2': (98.586,117.037,109.592)
C2: (102.246,114.654,112.754)
N1: (103.531,115.015,112.615)
N3: (101.217,114.874,111.939)
N6: (105.172,116.069,111.380)
N7: (102.934,116.663,109.350)
N9: (100.840,115.963,109.788)
O5': (97.418,116.975,105.767)
O3': (96.470,115.877,109.493)
Image (generated by PyMOL):